Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 5.2e-69 264.2 132 100.0
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 1.3e-56 223.0 124 87.1
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.6e-54 216.1 124 83.1
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.7e-54 214.9 124 83.1
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.7e-54 214.9 124 83.1
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 3.7e-54 214.9 124 83.1
COL.COLO4_09110 Corchorus olitorius HOM05D006839 ORTHO05D007872 1.5e-52 209.5 128 82.0
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 2.3e-48 195.7 124 76.6
QL12p022082 Quercus lobata HOM05D006839 ORTHO05D007872 2.3e-48 195.7 129 71.3
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 5.1e-48 194.5 124 76.6
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 5.6e-47 191.0 128 73.4
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 2.8e-46 188.7 124 73.4
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 1.4e-45 186.4 124 72.6
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 1.5e-44 183.0 126 71.4
Actinidia24884 Actinidia chinensis HOM05D006839 ORTHO05D007872 1.3e-43 179.9 131 69.5
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.3e-43 179.9 124 68.5
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.3e-43 179.9 124 73.4
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 2.9e-43 178.7 128 71.1
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 8.4e-43 177.2 128 70.3
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 1.1e-42 176.8 125 68.8
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 1.9e-42 176.0 110 73.6
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 9.3e-42 173.7 124 68.5
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 9.3e-42 173.7 114 72.8
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 4.6e-41 171.4 126 70.6
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 1.0e-40 170.2 111 72.1
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.8e-40 169.5 125 66.4
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 2.3e-40 169.1 124 66.9
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 6.7e-40 167.5 119 64.7
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 8.7e-40 167.2 125 65.6
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 7.4e-39 164.1 128 65.6
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.3e-38 163.3 125 66.4
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 1.6e-38 162.9 114 71.1
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 3.7e-38 161.8 121 64.5
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 6.3e-38 161.0 119 62.2
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 6.3e-38 161.0 113 69.9
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 2.4e-37 159.1 118 61.0
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 3.1e-37 158.7 121 57.9
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 4.1e-37 158.3 126 61.9
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 5.3e-37 157.9 122 61.5
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 6.9e-37 157.5 127 59.8
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 6.9e-37 157.5 119 61.3
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 9.0e-37 157.1 119 61.3
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 1.2e-36 156.8 119 60.5
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.5e-36 156.4 121 63.6
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.5e-36 156.4 118 60.2
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 1.5e-36 156.4 107 66.4
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 2.0e-36 156.0 108 66.7
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.0e-36 156.0 105 65.7
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 2.6e-36 155.6 122 62.3
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 3.4e-36 155.2 118 65.3
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 3.4e-36 155.2 126 62.7
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 2.2e-35 152.5 111 64.9
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.4e-34 149.8 127 62.2
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 7.9e-33 144.1 113 65.5
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.3e-32 142.5 101 65.3
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 3.0e-32 142.1 124 52.4
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 3.0e-32 142.1 124 52.4
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 5.1e-32 141.4 126 60.3
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 9.7e-31 137.1 124 57.3
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.8e-30 135.6 121 56.2
Nitab4.5_0007089g0020 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-29 133.7 121 56.2
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.4e-29 132.5 119 55.5
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.4e-29 132.5 119 55.5
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 2.4e-29 132.5 119 55.5
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 4.1e-29 131.7 119 55.5
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 2.6e-28 129.0 104 56.7
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.9e-26 122.9 109 56.9
Zm00001eb305770 Zea mays HOM05D006839 ORTHO05D007872 4.2e-26 121.7 126 50.0
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.0e-24 117.1 115 53.0
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 3.0e-24 115.5 116 52.6
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 6.7e-24 114.4 115 50.4
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.7e-22 109.8 112 50.9
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 2.2e-22 109.4 107 51.4
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 3.4e-20 102.1 115 47.0
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 4.5e-20 101.7 117 45.3
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 4.5e-20 101.7 115 45.2
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.7e-19 99.8 94 53.2
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 2.2e-19 99.4 97 50.5
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.9e-19 99.0 104 41.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 2.9e-19 99.0 116 44.0
Eucgr.J01400 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.9e-19 99.0 118 44.1
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 2.9e-19 99.0 117 46.2
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.8e-19 98.6 119 42.0
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 8.5e-19 97.4 120 46.7
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.9e-18 96.3 103 45.6
PGSC0003DMG400029246 Solanum tuberosum HOM05D006839 ORTHO05D007872 4.2e-18 95.1 75 60.0
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.0e-16 90.5 121 44.6
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 2.3e-16 89.4 57 71.9
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.9e-16 88.6 116 42.2
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 8.8e-16 87.4 101 43.6
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 2.6e-15 85.9 98 43.9
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.6e-15 85.9 92 45.7
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.7e-15 84.7 114 43.9
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 7.4e-15 84.3 126 38.1
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.7e-15 84.0 110 46.4
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.3e-14 83.6 124 33.9
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 1.3e-14 83.6 114 39.5
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.7e-14 83.2 116 42.2
SMO364G0778 Selaginella moellendorffii HOM05D006839 ORTHO05D007872 2.2e-14 82.8 117 35.9
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.3e-14 81.3 95 38.9
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 2.4e-13 79.3 100 38.0
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.3e-13 78.2 121 38.8
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 9.1e-13 77.4 107 40.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.2e-11 72.8 121 33.9
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-10 70.5 117 33.3
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 8.0e-09 64.3 113 33.6
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-08 63.9 100 33.0
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 1.0e-08 63.9 100 33.0
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 6.7e-08 61.2 104 37.5
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 7.5e-07 57.8 56 51.8
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.8e-06 55.1 79 40.5
PGR031G3557 Punica granatum HOM05D023640 ORTHO05D019592 8.2e-06 54.3 128 33.6


User provided reference genes

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