Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 8.4e-100 367.1 193 100.0
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 6.9e-78 294.3 196 82.1
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.7e-68 263.1 190 78.9
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 2.2e-63 246.1 201 72.1
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 2.8e-63 245.7 198 71.7
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 2.8e-63 245.7 198 71.7
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 4.1e-62 241.9 198 70.7
Gohir.D11G136600 Gossypium hirsutum HOM05D008367 ORTHO05D010529 9.1e-38 161.0 193 54.4
Gorai.007G146300 Gossypium raimondii HOM05D008367 ORTHO05D010529 7.7e-37 157.9 193 53.4
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 1.4e-30 137.1 200 46.0
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 1.2e-29 134.0 210 49.0
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 2.9e-28 129.4 208 44.2
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.4e-25 120.6 194 44.8
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.9e-25 117.9 201 45.3
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 8.9e-25 117.9 202 43.6
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 1.3e-23 114.0 197 38.1
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 2.9e-23 112.8 201 42.8
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 2.9e-23 112.8 194 41.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.9e-23 112.8 198 42.4
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 4.9e-23 112.1 194 40.7
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 6.4e-23 111.7 193 42.0
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 6.4e-23 111.7 199 41.7
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 8.3e-23 111.3 198 41.9
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 1.1e-22 110.9 195 39.0
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 1.4e-22 110.5 203 42.4
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 4.1e-22 109.0 199 40.7
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 7.0e-22 108.2 197 42.1
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.2e-21 107.5 199 40.7
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 1.2e-21 107.5 211 40.3
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 3.5e-21 105.9 197 41.1
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 4.6e-21 105.5 205 40.5
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 6.0e-21 105.1 192 39.1
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.0e-20 104.4 193 41.5
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 5.0e-20 102.1 193 41.5
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 6.6e-20 101.7 202 37.6
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.5e-19 100.5 201 38.8
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 4.3e-19 99.0 196 40.3
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 1.6e-18 97.1 198 38.9
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 3.6e-18 95.9 200 40.5
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.8e-17 93.6 193 39.4
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 2.3e-17 93.2 205 37.6
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.2e-16 90.9 195 39.0
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.0e-16 90.1 185 36.8
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.3e-15 87.4 202 37.6
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.2e-15 86.7 202 34.2
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 1.9e-14 83.6 198 35.9
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 7.1e-14 81.6 181 34.8
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 2.1e-13 80.1 194 38.1
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 2.1e-13 80.1 204 35.3
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 6.0e-13 78.6 182 35.7
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 1.3e-12 77.4 191 33.5
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 4.3e-11 72.4 198 34.3
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.2e-10 70.9 184 35.3
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 2.1e-10 70.1 211 37.0
Aqoxy5G00249 Aquilegia oxysepala HOM05D007526 ORTHO05D009350 4.7e-10 68.9 197 33.0
Nn3g19655 Nelumbo nucifera HOM05D007526 ORTHO05D009350 4.7e-10 68.9 231 31.6
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 2.3e-09 66.6 179 35.8
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 4.0e-09 65.9 196 33.2
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 6.8e-09 65.1 178 36.5
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 5.8e-08 62.0 189 32.3
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 9.9e-08 61.2 201 28.9
Haze_11381 Corylus avellana HOM05D007526 ORTHO05D009350 2.2e-07 60.1 186 30.6
PGSC0003DMG400017266 Solanum tuberosum HOM05D007526 ORTHO05D009350 2.9e-07 59.7 224 30.4
Cfa022958 Carpinus fangiana HOM05D007526 ORTHO05D009350 3.7e-07 59.3 186 30.6
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 3.7e-07 59.3 117 33.3
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 6.4e-07 58.5 121 38.0
Atru.chr4.2058 Acer truncatum HOM05D007526 ORTHO05D009350 1.1e-06 57.8 204 28.9
TAR636G0759 Trochodendron aralioides HOM05D007526 ORTHO05D009350 2.4e-06 56.6 205 32.7
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 4.1e-06 55.8 204 26.0
RcHm_v2.0_Chr4g0393211 Rosa chinensis HOM05D007526 ORTHO05D009350 5.4e-06 55.5 198 31.3
Sopen09g033060 Solanum pennellii HOM05D007526 ORTHO05D009350 7.1e-06 55.1 221 31.7
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 9.2e-06 54.7 218 28.9
Lj6g0011756 Lotus japonicus HOM05D007526 ORTHO05D009350 9.2e-06 54.7 197 27.9


User provided reference genes

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