Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G251000 Theobroma cacao HOM05D014916 ORTHO05D009575 2.7e-118 428.7 225 100.0
Duzib138G0893 Durio zibethinus HOM05D014916 ORTHO05D009575 7.3e-63 244.6 184 71.2
Gohir.A07G152000 Gossypium hirsutum HOM05D014916 ORTHO05D009575 6.3e-30 135.2 209 48.3
Gorai.001G181400 Gossypium raimondii HOM05D014916 ORTHO05D009575 6.5e-27 125.2 204 46.1
Gohir.D07G158200 Gossypium hirsutum HOM05D014916 ORTHO05D009575 1.2e-25 120.9 204 45.1
TAR365G0204 Trochodendron aralioides HOM05D008157 ORTHO05D009575 9.7e-23 111.3 152 42.8
QL09p041310 Quercus lobata HOM05D014916 ORTHO05D009575 2.9e-19 99.8 142 44.4
Dinv27113 Davidia involucrata HOM05D008157 ORTHO05D009575 1.9e-18 97.1 160 38.8
MBI10_g35435_MAGBIO Magnolia biondii HOM05D008157 ORTHO05D009575 3.2e-18 96.3 174 40.2
Manes.12G036500 Manihot esculenta HOM05D014916 ORTHO05D009575 6.1e-17 92.0 143 46.2
CiPaw.03G270400 Carya illinoinensis HOM05D014916 ORTHO05D009575 1.4e-16 90.9 189 37.6
TAR633G2472 Trochodendron aralioides HOM05D008157 ORTHO05D009575 1.7e-14 84.0 90 53.3
GSVIVG01028417001 Vitis vinifera HOM05D008157 ORTHO05D009575 1.7e-14 84.0 183 37.7
PSO832G3861 Papaver somniferum HOM05D008157 ORTHO05D009575 2.2e-14 83.6 121 44.6
Potri.014G192701 Populus trichocarpa HOM05D008157 ORTHO05D009575 2.2e-14 83.6 144 43.1
Prupe.8G216000 Prunus persica HOM05D017729 ORTHO05D022643 2.2e-14 83.6 197 38.1
Prupe.1G048400 Prunus persica HOM05D008157 ORTHO05D009575 8.2e-14 81.6 144 35.4
QL06p021011 Quercus lobata HOM05D008157 ORTHO05D009575 1.1e-13 81.3 175 36.0
Potri.010G065666 Populus trichocarpa HOM05D008157 ORTHO05D009575 7.0e-13 78.6 191 34.0
Potri.008G172000 Populus trichocarpa HOM05D008157 ORTHO05D009575 1.2e-12 77.8 175 34.3
Nn1g02959 Nelumbo nucifera HOM05D008157 ORTHO05D009575 3.5e-12 76.3 142 38.0
Peaxi162Scf00153g01844 Petunia axillaris HOM05D008157 ORTHO05D009575 3.5e-12 76.3 184 36.4
Psat6g107200 Pisum sativum HOM05D016547 ORTHO05D009575 5.9e-12 75.5 133 39.1
PSO764G0012 Papaver somniferum HOM05D008157 ORTHO05D009575 7.7e-12 75.1 119 41.2
Aqoxy5G00149 Aquilegia oxysepala HOM05D000655 ORTHO05D001635 1.0e-11 74.7 166 35.5
Hma1.2p1_0273F.1_g109240 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.7e-11 73.9 190 33.2
Hma1.2p1_1702F.1_g298280 Hydrangea macrophylla HOM05D008157 ORTHO05D009575 1.7e-11 73.9 139 38.1
Glyma.10G040300 Glycine max HOM05D016547 ORTHO05D009575 2.2e-11 73.6 132 32.6
Haze_11459 Corylus avellana HOM05D008157 ORTHO05D009575 5.0e-11 72.4 211 30.3
Sed0015987 Sechium edule HOM05D008157 ORTHO05D009575 6.5e-11 72.0 142 35.2
ClCG05G003990 Citrullus lanatus HOM05D008157 ORTHO05D009575 8.5e-11 71.6 191 31.9
COL.COLO4_05071 Corchorus olitorius HOM05D014916 ORTHO05D009575 1.1e-10 71.2 84 65.5
CANSAT78G1852 Cannabis sativa HOM05D008157 ORTHO05D009575 2.5e-10 70.1 187 30.5
FAN12G3964 Fragaria x ananassa HOM05D008157 ORTHO05D009575 2.5e-10 70.1 135 36.3
VMungo0720G0558 Vigna mungo HOM05D016547 ORTHO05D009575 2.5e-10 70.1 138 32.6
FvH4_4g04630 Fragaria vesca HOM05D008157 ORTHO05D009575 4.2e-10 69.3 167 32.9
Rhsim02G0043800 Rhododendron simsii HOM05D008157 ORTHO05D009575 4.2e-10 69.3 119 38.7
Gohir.A02G043000 Gossypium hirsutum HOM05D008157 ORTHO05D009575 5.5e-10 68.9 189 32.3
MD16G1226400 Malus domestica HOM05D008157 ORTHO05D009575 5.5e-10 68.9 181 35.9
Atru.chr4.1914 Acer truncatum HOM05D008157 ORTHO05D009575 1.2e-09 67.8 142 35.2
Sabra08G0131300 Salix brachista HOM05D008157 ORTHO05D009575 1.2e-09 67.8 199 31.2
Gohir.D02G048700 Gossypium hirsutum HOM05D008157 ORTHO05D009575 1.6e-09 67.4 189 30.7
Manes.15G045800 Manihot esculenta HOM05D008157 ORTHO05D009575 1.6e-09 67.4 177 30.5
Cc03_g06320 Coffea canephora HOM05D008157 ORTHO05D009575 2.1e-09 67.0 136 36.0
Cc09_g08530 Coffea canephora HOM05D008157 ORTHO05D009575 2.1e-09 67.0 136 36.0
Thecc.04G264100 Theobroma cacao HOM05D008157 ORTHO05D009575 2.1e-09 67.0 191 30.9
CSS0033147 Camellia sinensis var. sinensis HOM05D008157 ORTHO05D009575 2.7e-09 66.6 93 38.7
MELO3C006376.2 Cucumis melo HOM05D008157 ORTHO05D009575 6.1e-09 65.5 164 31.7
CDE01G0186 Ceratophyllum demersum HOM05D008157 ORTHO05D009575 1.0e-08 64.7 140 36.4
Lj5g0023776 Lotus japonicus HOM05D012468 ORTHO05D009575 1.4e-08 64.3 208 28.8
Sabra10G0041500 Salix brachista HOM05D008157 ORTHO05D009575 1.4e-08 64.3 185 30.8
EL10Ac3g06669 Beta vulgaris HOM05D008157 ORTHO05D009575 1.8e-08 63.9 154 33.1
PGR004G0105 Punica granatum HOM05D008157 ORTHO05D009575 2.3e-08 63.5 144 32.6
Haze_24700 Corylus avellana HOM05D008157 ORTHO05D009575 6.7e-08 62.0 178 32.6
CsaV3_3G011680 Cucumis sativus L. HOM05D008157 ORTHO05D009575 2.0e-07 60.5 166 31.3
CiPaw.02G106900 Carya illinoinensis HOM05D008157 ORTHO05D009575 2.6e-07 60.1 186 31.7
TWI09G0993 Tripterygium wilfordii HOM05D008157 ORTHO05D009575 3.3e-07 59.7 203 29.1
VMungo1215G2213 Vigna mungo HOM05D012468 ORTHO05D009575 4.4e-07 59.3 201 29.9
SalBow2G3016 Salvia bowleyana HOM05D008157 ORTHO05D009575 5.7e-07 58.9 116 34.5
DCAR_030762 Daucus carota HOM05D008157 ORTHO05D009575 7.5e-07 58.5 97 40.2
Manes.03G158800 Manihot esculenta HOM05D008157 ORTHO05D009575 9.7e-07 58.2 178 29.8
Thhalv10026480m.g Eutrema salsugineum HOM05D012000 ORTHO05D013959 1.3e-06 57.8 115 36.5
Lalb_Chr02g0152721 Lupinus albus HOM05D016547 ORTHO05D009575 2.8e-06 56.6 130 30.0
Aa31LG9G18080 Aethionema arabicum HOM05D012000 ORTHO05D013959 3.7e-06 56.2 135 36.3
Glyma.20G200000 Glycine max HOM05D012468 ORTHO05D009575 4.8e-06 55.8 197 30.5
Nitab4.5_0007351g0030 Nicotiana tabacum HOM05D008157 ORTHO05D009575 4.8e-06 55.8 129 34.9
Phvul.011G133515 Phaseolus vulgaris HOM05D012468 ORTHO05D009575 4.8e-06 55.8 148 32.4
Hund20495 Selenicereus undatus HOM05D008157 ORTHO05D009575 6.3e-06 55.5 190 25.8
Cpa.g.sc87.23 Carica papaya HOM05D014916 ORTHO05D009575 8.2e-06 55.1 104 38.5


User provided reference genes

Program Settings