Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.0e-99 366.7 178 100.0
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 1.4e-93 346.3 178 92.7
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 5.4e-93 344.4 178 91.6
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 5.4e-93 344.4 178 91.6
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 7.0e-93 344.0 178 92.7
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 7.0e-93 344.0 178 92.7
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 7.0e-93 344.0 178 92.1
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 1.3e-91 339.7 178 92.1
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 7.5e-87 323.9 178 84.3
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 4.9e-86 321.2 172 87.2
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 1.4e-85 319.7 174 84.5
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 6.0e-84 314.3 173 84.4
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 5.0e-83 311.2 173 81.5
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 6.6e-83 310.8 178 80.9
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 6.6e-83 310.8 172 83.7
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 8.6e-83 310.5 173 83.2
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 1.1e-82 310.1 178 80.3
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 1.5e-82 309.7 173 83.2
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 2.5e-82 308.9 173 82.1
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 2.5e-82 308.9 178 82.6
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 3.3e-82 308.5 172 82.6
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 3.3e-82 308.5 178 78.7
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 1.2e-81 306.6 178 80.3
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 1.6e-81 306.2 173 79.8
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 1.6e-81 306.2 180 78.9
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 2.1e-81 305.8 175 78.9
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 6.2e-81 304.3 171 82.5
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.1e-80 303.5 173 80.9
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 1.1e-80 303.5 172 80.8
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.1e-80 303.5 171 81.9
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 1.4e-80 303.1 173 80.3
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 1.8e-80 302.8 171 83.0
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 1.8e-80 302.8 173 80.9
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 2.3e-80 302.4 173 79.8
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 3.1e-80 302.0 174 79.3
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 4.0e-80 301.6 173 80.9
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 4.0e-80 301.6 174 81.0
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 5.2e-80 301.2 178 77.0
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 5.2e-80 301.2 174 78.2
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 5.2e-80 301.2 174 79.9
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 5.2e-80 301.2 178 77.0
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 6.8e-80 300.8 173 79.2
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 8.9e-80 300.4 178 77.0
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 1.2e-79 300.1 170 80.6
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 2.0e-79 299.3 167 81.4
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 2.6e-79 298.9 178 76.4
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 2.6e-79 298.9 171 80.1
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 3.4e-79 298.5 180 78.3
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 3.4e-79 298.5 180 77.8
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 3.4e-79 298.5 170 80.0
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 3.4e-79 298.5 170 80.0
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 4.4e-79 298.1 172 79.1
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 5.8e-79 297.7 176 76.1
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 7.5e-79 297.4 173 78.0
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 9.9e-79 297.0 175 77.7
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 9.9e-79 297.0 173 78.6
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 1.7e-78 296.2 175 77.7
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 2.2e-78 295.8 170 78.8
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.2e-78 295.8 170 78.8
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 2.2e-78 295.8 167 80.2
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 2.2e-78 295.8 171 79.5
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 2.2e-78 295.8 171 79.5
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.7e-78 295.0 171 78.9
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 6.4e-78 294.3 174 76.4
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 6.4e-78 294.3 175 76.6
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 1.4e-77 293.1 170 77.6
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 1.9e-77 292.7 171 78.4
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 1.9e-77 292.7 167 77.8
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 2.4e-77 292.4 171 76.6
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 3.2e-77 292.0 169 76.9
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 4.1e-77 291.6 171 78.4
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 4.1e-77 291.6 171 79.5
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 5.4e-77 291.2 159 82.4
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 7.1e-77 290.8 166 78.3
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 7.1e-77 290.8 170 77.6
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 9.2e-77 290.4 171 76.0
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.6e-76 289.7 208 67.3
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 2.7e-76 288.9 168 78.0
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 3.5e-76 288.5 166 78.9
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 3.5e-76 288.5 167 79.6
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.0e-75 287.0 166 78.9
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 1.0e-75 287.0 166 78.9
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 1.3e-75 286.6 166 78.3
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 1.3e-75 286.6 177 75.1
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.7e-75 286.2 172 73.8
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.7e-75 286.2 169 74.0
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 1.7e-75 286.2 182 74.7
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 2.3e-75 285.8 164 81.1
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 2.3e-75 285.8 175 78.3
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 3.9e-75 285.0 178 75.3
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 5.1e-75 284.6 169 76.3
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 6.6e-75 284.3 171 75.4
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 6.6e-75 284.3 171 74.3
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.9e-74 282.7 162 80.2
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 5.6e-74 281.2 169 73.4
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 5.6e-74 281.2 177 73.4
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 1.2e-73 280.0 175 73.7
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.2e-73 280.0 166 74.1
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.6e-73 279.6 236 59.7
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 2.1e-73 279.3 174 73.6
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 2.1e-73 279.3 174 72.4
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 2.1e-73 279.3 174 72.4
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 3.6e-73 278.5 174 73.0
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 3.6e-73 278.5 163 79.1
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 4.7e-73 278.1 175 72.6
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 4.7e-73 278.1 177 72.9
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 1.8e-72 276.2 177 71.2
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 4.0e-72 275.0 174 70.7
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 2.0e-71 272.7 175 69.7
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 4.4e-71 271.6 174 72.4
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 3.8e-70 268.5 164 76.2
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 3.8e-70 268.5 164 76.2
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 3.8e-70 268.5 154 78.6
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 6.4e-70 267.7 174 70.1
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 8.4e-70 267.3 174 69.5
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.1e-69 266.9 164 75.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 2.4e-69 265.8 164 75.0
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 3.2e-69 265.4 175 67.4
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 9.2e-69 263.8 175 68.6
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 1.0e-67 260.4 169 69.2
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 1.0e-67 260.4 175 66.9
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 2.3e-67 259.2 157 77.7
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 3.3e-66 255.4 175 71.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 2.1e-65 252.7 157 76.4
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 3.6e-65 251.9 166 68.1
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 1.4e-64 250.0 170 65.3
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 5.8e-63 244.6 169 66.9
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 1.3e-62 243.4 181 63.5
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 4.9e-62 241.5 168 70.2
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 1.9e-61 239.6 175 62.3
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 3.2e-61 238.8 160 68.8
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 1.2e-60 236.9 168 64.3
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 5.6e-58 228.0 165 63.0
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 7.3e-58 227.6 168 60.7
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 1.1e-50 203.8 166 56.0
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.9e-50 203.0 122 76.2
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.5e-50 202.6 109 82.6
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 9.9e-47 190.7 111 79.3
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.9e-45 186.4 114 73.7
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 1.3e-43 180.3 170 49.4
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.3e-43 180.3 111 74.8
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 8.7e-43 177.6 167 53.9
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 4.3e-42 175.3 104 76.9
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 2.8e-41 172.6 104 75.0
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 1.4e-40 170.2 178 55.1
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 2.4e-40 169.5 115 67.0
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 9.0e-40 167.5 103 73.8
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 2.0e-39 166.4 104 74.0
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 1.1e-37 160.6 108 68.5
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 1.1e-37 160.6 108 68.5
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 7.9e-36 154.5 85 84.7
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 1.1e-34 150.6 176 50.0
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.6e-28 130.2 79 72.2
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 2.7e-28 129.4 162 38.9
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 3.9e-27 125.6 143 51.7
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 2.8e-25 119.4 123 51.2
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.4e-19 100.5 63 69.8
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 8.8e-19 97.8 68 67.6
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 2.8e-17 92.8 187 27.8
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 5.9e-15 85.1 67 55.2
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.0e-14 84.3 67 55.2
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 3.8e-14 82.4 79 49.4
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 9.4e-13 77.8 68 55.9
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 2.3e-11 73.2 35 88.6
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 4.1e-08 62.4 48 64.6


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