Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 1.7e-85 319.3 164 100.0
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.6e-67 259.6 140 94.3
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 3.6e-67 258.5 144 94.4
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 4.7e-67 258.1 140 93.6
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.4e-66 256.5 144 93.8
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 6.7e-66 254.2 144 93.1
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 1.5e-65 253.1 140 91.4
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 2.0e-65 252.7 146 90.4
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 7.5e-65 250.8 140 91.4
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 1.4e-55 219.9 143 79.0
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 3.1e-55 218.8 143 80.4
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 7.0e-55 217.6 146 78.1
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 1.3e-53 213.4 144 76.4
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.3e-53 213.4 147 75.5
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 2.3e-53 212.6 143 78.3
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 2.9e-53 212.2 143 77.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 3.8e-53 211.8 142 76.1
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 8.6e-53 210.7 145 76.6
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 8.6e-53 210.7 140 75.0
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 1.5e-52 209.9 142 75.4
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 2.5e-52 209.1 148 75.7
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.5e-52 209.1 143 76.9
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 2.5e-52 209.1 147 73.5
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 7.2e-52 207.6 148 73.0
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 9.5e-52 207.2 143 74.1
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 1.2e-51 206.8 143 75.5
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.6e-51 206.5 148 73.6
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 2.1e-51 206.1 145 75.2
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 2.1e-51 206.1 144 73.6
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 2.1e-51 206.1 145 73.1
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 4.7e-51 204.9 145 73.8
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 4.7e-51 204.9 147 69.4
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 6.1e-51 204.5 150 72.7
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 8.0e-51 204.1 149 71.1
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.0e-50 203.8 147 72.1
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 1.4e-50 203.4 141 71.6
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.4e-50 203.4 144 74.3
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 1.8e-50 203.0 135 73.3
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 2.3e-50 202.6 142 74.6
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 3.0e-50 202.2 143 70.6
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 4.0e-50 201.8 143 74.1
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 4.0e-50 201.8 148 72.3
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 4.0e-50 201.8 139 71.2
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 6.8e-50 201.1 142 71.1
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 6.8e-50 201.1 142 71.1
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 6.8e-50 201.1 150 73.3
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 8.9e-50 200.7 149 71.1
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 1.2e-49 200.3 141 70.2
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 1.5e-49 199.9 137 72.3
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 1.5e-49 199.9 137 72.3
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 2.0e-49 199.5 148 70.3
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.0e-49 199.5 141 70.2
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.0e-49 199.5 141 70.2
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 4.4e-49 198.4 147 68.7
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 4.4e-49 198.4 144 70.8
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 5.7e-49 198.0 146 69.2
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 5.7e-49 198.0 143 72.7
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 7.5e-49 197.6 150 70.0
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 7.5e-49 197.6 144 70.1
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.3e-48 196.8 142 69.7
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 1.7e-48 196.4 148 70.9
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.2e-48 196.1 149 68.5
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.2e-48 196.1 149 68.5
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 2.8e-48 195.7 137 70.8
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 3.7e-48 195.3 140 71.4
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 3.7e-48 195.3 145 72.4
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 4.9e-48 194.9 140 70.7
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 6.3e-48 194.5 150 68.7
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 1.1e-47 193.7 144 72.2
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.4e-47 193.4 146 66.4
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 1.4e-47 193.4 147 70.1
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 2.4e-47 192.6 144 68.8
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.4e-47 192.6 141 71.6
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 4.1e-47 191.8 147 67.3
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 4.1e-47 191.8 143 68.5
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 5.4e-47 191.4 150 68.7
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 5.4e-47 191.4 135 74.1
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 9.2e-47 190.7 146 69.9
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 4.5e-46 188.3 148 69.6
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 4.5e-46 188.3 140 70.0
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 5.9e-46 188.0 150 67.3
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 3.8e-45 185.3 155 63.2
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 6.6e-45 184.5 141 69.5
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 8.6e-45 184.1 150 65.3
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 1.9e-44 183.0 147 63.9
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 2.5e-44 182.6 144 63.2
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.3e-44 181.8 140 70.0
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 4.3e-44 181.8 144 66.0
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 5.6e-44 181.4 151 60.3
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 5.6e-44 181.4 140 66.4
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 5.6e-44 181.4 143 65.7
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 9.5e-44 180.6 151 60.9
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 1.2e-43 180.3 112 77.7
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 1.2e-43 180.3 142 69.0
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 2.8e-43 179.1 146 65.1
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 3.6e-43 178.7 141 66.0
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 4.7e-43 178.3 146 65.1
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 4.7e-43 178.3 146 65.1
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.7e-43 178.3 139 67.6
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 6.1e-43 177.9 147 61.9
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 1.0e-42 177.2 144 63.2
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.0e-42 177.2 143 65.0
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 1.4e-42 176.8 144 64.6
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 5.2e-42 174.9 144 63.2
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 8.9e-42 174.1 140 67.9
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 9.8e-41 170.6 148 65.5
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.9e-40 169.1 124 66.1
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 3.7e-40 168.7 140 62.1
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 1.8e-39 166.4 104 73.1
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 7.8e-38 161.0 149 59.1
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.4e-31 140.2 84 79.8
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 5.0e-29 131.7 104 67.3
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.4e-26 123.6 145 45.5
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 2.3e-26 122.9 121 50.4
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 6.6e-21 104.8 115 47.8
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 2.4e-18 96.3 76 64.5
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 5.2e-18 95.1 60 70.0
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 6.8e-18 94.7 71 63.4
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 1.5e-17 93.6 76 63.2
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 3.5e-14 82.4 91 59.3
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 4.4e-09 65.5 141 32.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 1.7e-08 63.5 107 34.6
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 4.9e-08 62.0 119 34.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 9.3e-07 57.8 35 74.3
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 6.0e-06 55.1 35 68.6


User provided reference genes

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