Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G159400 Theobroma cacao HOM05D067391 ORTHO05D044764 6.9e-205 717.2 404 100.0
COL.COLO4_33711 Corchorus olitorius HOM05D067391 ORTHO05D044764 2.9e-17 94.0 368 35.6
Thecc.09G247300 Theobroma cacao HOM05D014747 ORTHO05D015925 5.4e-16 89.7 390 25.4
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 2.8e-12 77.4 346 25.4
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 4.7e-12 76.6 150 35.3
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 2.2e-09 67.8 187 26.7
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 3.8e-09 67.0 128 32.8
Duzib168G1830 Durio zibethinus HOM05D014747 ORTHO05D015925 4.9e-09 66.6 409 25.9
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 6.4e-09 66.2 379 25.6
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 6.4e-09 66.2 300 26.7
arahy.Tifrunner.gnm1.ann1.1FA9DV Arachis hypogaea HOM05D008543 ORTHO05D000630 1.1e-08 65.5 238 28.2
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 1.4e-08 65.1 157 30.6
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 1.4e-08 65.1 351 24.8
arahy.Tifrunner.gnm1.ann1.YK7I6N Arachis hypogaea HOM05D008543 ORTHO05D000630 3.2e-08 63.9 239 28.9
Lj1C901G3 Lonicera japonica HOM05D000174 ORTHO05D000630 9.3e-08 62.4 126 46.8
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 9.3e-08 62.4 142 31.0
CiPaw.12G142600 Carya illinoinensis HOM05D000174 ORTHO05D000630 1.2e-07 62.0 155 29.0
Sp6g18050 Schrenkiella parvula HOM05D000174 ORTHO05D000630 1.2e-07 62.0 164 29.9
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 2.1e-07 61.2 371 25.1
Gohir.A08G009700 Gossypium hirsutum HOM05D008543 ORTHO05D000630 4.6e-07 60.1 157 29.9
Gohir.D08G019750 Gossypium hirsutum HOM05D008543 ORTHO05D000630 6.0e-07 59.7 157 29.9
Gorai.004G014300 Gossypium raimondii HOM05D008543 ORTHO05D000630 6.0e-07 59.7 157 29.9
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 6.0e-07 59.7 327 25.7
A10p13430 Brassica napus HOM05D000174 ORTHO05D000630 1.0e-06 58.9 153 28.8
BraA10t43446Z Brassica rapa HOM05D000174 ORTHO05D000630 1.0e-06 58.9 153 28.8
CANSAT54G2384 Cannabis sativa HOM05D008543 ORTHO05D000630 1.3e-06 58.5 251 25.9
THA.LOC104811702 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.3e-06 58.5 367 26.7
CDE06G2287 Ceratophyllum demersum HOM05D056667 ORTHO05D000630 1.7e-06 58.2 185 36.8
Thecc.09G250700 Theobroma cacao HOM05D008543 ORTHO05D000630 5.1e-06 56.6 116 33.6
BcaC04g20137 Brassica carinata HOM05D000174 ORTHO05D000630 6.6e-06 56.2 158 25.9
BolC9t57599H Brassica oleracea HOM05D000174 ORTHO05D000630 6.6e-06 56.2 158 25.9
CARHR269600 Cardamine hirsuta HOM05D000174 ORTHO05D000630 6.6e-06 56.2 401 23.9
Cfa010152 Carpinus fangiana HOM05D019813 ORTHO05D000630 6.6e-06 56.2 259 32.0
Rhsim04G0007800 Rhododendron simsii HOM05D000174 ORTHO05D000630 6.6e-06 56.2 131 43.5


User provided reference genes

Program Settings