Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G153500 Theobroma cacao HOM05D008673 ORTHO05D010863 7.4e-72 273.9 148 100.0
Gohir.1Z049426 Gossypium hirsutum HOM05D008673 ORTHO05D010863 2.0e-56 222.6 148 79.7
Gohir.1Z049527 Gossypium hirsutum HOM05D008673 ORTHO05D010863 2.0e-56 222.6 148 79.7
Gohir.A05G376500 Gossypium hirsutum HOM05D008673 ORTHO05D010863 5.7e-56 221.1 148 77.7
COL.COLO4_33611 Corchorus olitorius HOM05D008673 ORTHO05D010863 7.7e-53 210.7 154 79.9
Cpa.g.c43414 Carica papaya HOM05D008673 ORTHO05D010863 1.3e-39 166.8 148 64.9
Ciclev10017107m.g Citrus clementina HOM05D008673 ORTHO05D010863 2.9e-36 155.6 135 68.1
Atru.chr6.2763 Acer truncatum HOM05D008673 ORTHO05D010863 5.2e-33 144.8 149 59.7
Cfa023576 Carpinus fangiana HOM05D008673 ORTHO05D010863 9.8e-32 140.6 151 57.0
MD17G1264400 Malus domestica HOM05D008673 ORTHO05D010863 1.4e-30 136.7 160 55.6
CSS0031774 Camellia sinensis var. sinensis HOM05D008673 ORTHO05D010863 3.2e-30 135.6 154 56.5
Haze_13428 Corylus avellana HOM05D008673 ORTHO05D010863 5.4e-30 134.8 151 55.0
Hma1.2p1_0178F.1_g078530 Hydrangea macrophylla HOM05D008673 ORTHO05D010863 2.0e-29 132.9 151 54.3
QL08p042310 Quercus lobata HOM05D008673 ORTHO05D010863 2.0e-29 132.9 151 52.3
Dinv11960 Davidia involucrata HOM05D008673 ORTHO05D010863 6.0e-29 131.3 131 58.0
PSO782G1671 Papaver somniferum HOM05D008673 ORTHO05D010863 6.0e-29 131.3 152 48.7
Gorai.012G044500 Gossypium raimondii HOM05D008673 ORTHO05D010863 1.0e-28 130.6 99 70.7
PSO170G4741 Papaver somniferum HOM05D008673 ORTHO05D010863 1.3e-28 130.2 153 47.1
Peaxi162Scf00469g00533 Petunia axillaris HOM05D008673 ORTHO05D010863 3.9e-28 128.6 152 51.3
Rhsim06G0129800 Rhododendron simsii HOM05D008673 ORTHO05D010863 3.9e-28 128.6 145 56.6
PGSC0003DMG400020413 Solanum tuberosum HOM05D008673 ORTHO05D010863 2.5e-27 125.9 142 52.1
Migut.M00276 Erythranthe guttata HOM05D008673 ORTHO05D010863 4.3e-27 125.2 137 54.7
MBI06_g36541_MAGBIO Magnolia biondii HOM05D008673 ORTHO05D010863 4.3e-27 125.2 148 54.7
Sopen07g026970 Solanum pennellii HOM05D008673 ORTHO05D010863 1.4e-25 120.2 143 50.3
Nn3g21118 Nelumbo nucifera HOM05D008673 ORTHO05D010863 1.8e-25 119.8 144 50.0
Solyc07g055250.3 Solanum lycopersicum HOM05D008673 ORTHO05D010863 1.8e-25 119.8 148 48.0
Aqoxy4G00256 Aquilegia oxysepala HOM05D008673 ORTHO05D010863 4.0e-25 118.6 156 50.0
TAR626G0445 Trochodendron aralioides HOM05D008673 ORTHO05D010863 1.2e-24 117.1 159 49.1
CANSAT64G3005 Cannabis sativa HOM05D008673 ORTHO05D010863 3.4e-24 115.5 136 52.9
TAR686G0002 Trochodendron aralioides HOM05D008673 ORTHO05D010863 1.3e-23 113.6 165 48.5
Nn1g04505 Nelumbo nucifera HOM05D008673 ORTHO05D010863 1.6e-21 106.7 146 47.9
GSVIVG01020747001 Vitis vinifera HOM05D008673 ORTHO05D010863 6.6e-20 101.3 112 52.7
Prupe.3G113700 Prunus persica HOM05D008673 ORTHO05D010863 3.6e-18 95.5 148 46.6
SEGI_15633 Sequoiadendron giganteum HOM05D008673 ORTHO05D010863 1.5e-16 90.1 156 42.3
Nitab4.5_0000249g0110 Nicotiana tabacum HOM05D008673 ORTHO05D010863 1.1e-14 84.0 130 43.1
Nitab4.5_0007923g0050 Nicotiana tabacum HOM05D008673 ORTHO05D010863 4.1e-14 82.0 143 40.6
SMO361G0580 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 1.9e-11 73.2 146 34.2
SMO361G0282 Selaginella moellendorffii HOM05D008673 ORTHO05D010863 3.3e-11 72.4 146 34.2
Pp3c1_33030 Physcomitrium patens HOM05D008673 ORTHO05D010863 2.4e-09 66.2 129 32.6
AagrBONN_evm.TU.Sc2ySwM_344.5531 Anthoceros agrestis HOM05D008673 ORTHO05D010863 5.2e-09 65.1 144 31.2
Pp3c2_4650 Physcomitrium patens HOM05D008673 ORTHO05D010863 5.8e-08 61.6 133 28.6
Pp3c14_19400 Physcomitrium patens HOM05D008673 ORTHO05D010863 1.7e-07 60.1 143 30.8
Pp3c22_5700 Physcomitrium patens HOM05D046728 ORTHO05D313617 5.4e-06 55.1 44 54.5
Mapoly0059s0074 Marchantia polymorpha HOM05D008673 ORTHO05D010863 9.2e-06 54.3 42 59.5


User provided reference genes

Program Settings