Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G146600 Theobroma cacao HOM05D004337 ORTHO05D005422 0.0e+00 1161.4 588 100.0
Gohir.A12G002300 Gossypium hirsutum HOM05D004337 ORTHO05D005422 0.0e+00 1078.2 567 91.7
Gorai.008G001400 Gossypium raimondii HOM05D004337 ORTHO05D005422 1.2e-309 1065.8 574 90.2
Gohir.D04G040600 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.8e-308 1061.2 568 89.3
Gorai.012G045800 Gossypium raimondii HOM05D004337 ORTHO05D005422 2.8e-308 1061.2 568 89.3
Gohir.A05G375100 Gossypium hirsutum HOM05D004337 ORTHO05D005422 2.4e-307 1058.1 568 89.1
CiPaw.15G184900 Carya illinoinensis HOM05D004337 ORTHO05D005422 3.3e-296 1021.1 568 85.6
Potri.T045800 Populus trichocarpa HOM05D004337 ORTHO05D005422 1.2e-293 1012.7 569 84.9
Potri.018G137500 Populus trichocarpa HOM05D004337 ORTHO05D005422 3.4e-293 1011.1 569 84.7
COL.COLO4_33529 Corchorus olitorius HOM05D004337 ORTHO05D005422 7.5e-293 1010.0 575 85.6
Cfa020919 Carpinus fangiana HOM05D004337 ORTHO05D005422 3.2e-291 1004.6 571 83.9
Manes.12G081000 Manihot esculenta HOM05D004337 ORTHO05D005422 2.1e-290 1001.9 568 83.6
Potri.004G134500 Populus trichocarpa HOM05D004337 ORTHO05D005422 6.6e-289 996.9 569 83.8
QL10p037473 Quercus lobata HOM05D004337 ORTHO05D005422 8.6e-289 996.5 569 83.0
Dinv09624 Davidia involucrata HOM05D004337 ORTHO05D005422 2.5e-288 995.0 568 84.7
Prupe.4G286100 Prunus persica HOM05D004337 ORTHO05D005422 3.3e-288 994.6 568 82.7
MD15G1140200 Malus domestica HOM05D004337 ORTHO05D005422 1.2e-287 992.6 574 81.7
Sabra04G0083600 Salix brachista HOM05D004337 ORTHO05D005422 1.6e-287 992.3 569 82.8
Ciclev10025224m.g Citrus clementina HOM05D004337 ORTHO05D005422 1.8e-286 988.8 570 82.1
MELO3C003282.2 Cucumis melo HOM05D004337 ORTHO05D005422 5.2e-286 987.3 568 82.6
Actinidia36582 Actinidia chinensis HOM05D004337 ORTHO05D005422 8.9e-286 986.5 574 82.9
MBI06_g32147_MAGBIO Magnolia biondii HOM05D004337 ORTHO05D005422 3.4e-285 984.6 574 81.5
Atru.chr3.1466 Acer truncatum HOM05D004337 ORTHO05D005422 2.2e-284 981.9 571 82.3
CsaV3_4G030000 Cucumis sativus L. HOM05D004337 ORTHO05D005422 2.2e-284 981.9 568 81.7
Hma1.2p1_0296F.1_g116900 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 3.7e-284 981.1 568 83.5
TAR376G0777 Trochodendron aralioides HOM05D004337 ORTHO05D005422 3.2e-283 978.0 569 82.4
Sed0025757 Sechium edule HOM05D004337 ORTHO05D005422 3.5e-282 974.5 568 81.3
Aqoxy5G01850 Aquilegia oxysepala HOM05D004337 ORTHO05D005422 7.8e-282 973.4 573 82.2
GSVIVG01000243001 Vitis vinifera HOM05D004337 ORTHO05D005422 1.3e-281 972.6 569 81.5
Oeu046358.1 Olea europaea HOM05D004337 ORTHO05D005422 3.9e-281 971.1 568 81.7
PGR119G0424 Punica granatum HOM05D004337 ORTHO05D005422 2.5e-280 968.4 569 82.8
arahy.Tifrunner.gnm1.ann1.X1BSDH Arachis hypogaea HOM05D004337 ORTHO05D005422 9.5e-280 966.5 545 83.7
THA.LOC104819366 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 2.8e-279 964.9 568 80.8
MSTRG.23236 Avicennia marina HOM05D004337 ORTHO05D005422 3.6e-279 964.5 568 81.2
Actinidia19947 Actinidia chinensis HOM05D004337 ORTHO05D005422 8.1e-279 963.4 568 81.9
THA.LOC104818397 Tarenaya hassleriana HOM05D004337 ORTHO05D005422 8.1e-279 963.4 567 81.1
RcHm_v2.0_Chr3g0484771 Rosa chinensis HOM05D004337 ORTHO05D005422 1.4e-278 962.6 570 80.2
VMungo1309G0234 Vigna mungo HOM05D004337 ORTHO05D005422 1.4e-278 962.6 570 81.1
Hund21761 Selenicereus undatus HOM05D004337 ORTHO05D005422 2.4e-278 961.8 570 79.3
CANSAT54G2432 Cannabis sativa HOM05D004337 ORTHO05D005422 5.2e-278 960.7 576 78.8
Glyma.04G203800 Glycine max HOM05D004337 ORTHO05D005422 6.8e-278 960.3 569 81.2
Lalb_Chr07g0183961 Lupinus albus HOM05D004337 ORTHO05D005422 8.9e-278 959.9 573 81.5
Solyc05g056350.3 Solanum lycopersicum HOM05D004337 ORTHO05D005422 8.9e-278 959.9 572 79.7
Sopen05g034740 Solanum pennellii HOM05D004337 ORTHO05D005422 8.9e-278 959.9 572 79.5
Oeu054207.1 Olea europaea HOM05D004337 ORTHO05D005422 4.4e-277 957.6 588 78.9
CAN.G1156.26 Capsicum annuum HOM05D004337 ORTHO05D005422 7.6e-277 956.8 568 79.9
Eucgr.I00018 Eucalyptus grandis HOM05D004337 ORTHO05D005422 9.9e-277 956.4 568 81.2
Lj1g0000957 Lotus japonicus HOM05D004337 ORTHO05D005422 9.9e-277 956.4 564 80.7
Peaxi162Scf00353g00735 Petunia axillaris HOM05D004337 ORTHO05D005422 9.9e-277 956.4 578 78.9
PGSC0003DMG400023451 Solanum tuberosum HOM05D004337 ORTHO05D005422 2.2e-276 955.3 579 78.9
FvH4_1g25770 Fragaria vesca HOM05D004337 ORTHO05D005422 8.4e-276 953.4 576 79.3
EL10Ac4g09743 Beta vulgaris HOM05D004337 ORTHO05D005422 1.4e-275 952.6 556 80.2
FAN23G1824 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.9e-275 952.2 593 78.2
TWI75G1462 Tripterygium wilfordii HOM05D004337 ORTHO05D005422 1.9e-275 952.2 567 79.0
Migut.H02542 Erythranthe guttata HOM05D004337 ORTHO05D005422 2.4e-275 951.8 568 79.6
FAN28G1720 Fragaria x ananassa HOM05D004337 ORTHO05D005422 3.2e-275 951.4 593 78.1
Sc16g0009860 Simmondsia chinensis HOM05D004337 ORTHO05D005422 3.2e-275 951.4 546 82.2
FAN19G0301 Fragaria x ananassa HOM05D004337 ORTHO05D005422 5.4e-275 950.7 593 78.4
ATR1089G072 Amborella trichopoda HOM05D004337 ORTHO05D005422 1.6e-274 949.1 573 78.9
TPR.G7800 Trifolium pratense HOM05D004337 ORTHO05D005422 2.7e-274 948.3 568 79.6
AL6G19170 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 3.5e-274 948.0 572 78.8
Glyma.06G161400 Glycine max HOM05D004337 ORTHO05D005422 3.5e-274 948.0 563 80.3
Thhalv10013045m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 4.6e-274 947.6 575 79.0
unitig_736.g22365 Utricularia gibba HOM05D004337 ORTHO05D005422 1.3e-273 946.0 573 79.9
FAN26G1467 Fragaria x ananassa HOM05D004337 ORTHO05D005422 1.7e-273 945.7 593 77.7
Nitab4.5_0000496g0240 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.3e-273 945.3 558 80.5
BolC9t59595H Brassica oleracea HOM05D004337 ORTHO05D005422 3.9e-273 944.5 577 78.7
CARHR204490 Cardamine hirsuta HOM05D004337 ORTHO05D005422 8.7e-273 943.3 576 79.7
Lalb_Chr12g0202711 Lupinus albus HOM05D004337 ORTHO05D005422 8.7e-273 943.3 573 79.4
Oeu017633.3 Olea europaea HOM05D004337 ORTHO05D005422 1.1e-272 943.0 568 79.9
Lsat_1_v5_gn_2_40441 Lactuca sativa HOM05D004337 ORTHO05D005422 1.5e-272 942.6 572 79.4
BraA10t44874Z Brassica rapa HOM05D004337 ORTHO05D005422 2.5e-272 941.8 576 78.5
Carub.0006s0742 Capsella rubella HOM05D004337 ORTHO05D005422 2.5e-272 941.8 572 79.0
C09p68510 Brassica napus HOM05D004337 ORTHO05D005422 3.3e-272 941.4 578 78.5
Aa31LG11G2980 Aethionema arabicum HOM05D004337 ORTHO05D005422 2.1e-271 938.7 569 77.3
Psat5g057120 Pisum sativum HOM05D004337 ORTHO05D005422 2.1e-271 938.7 569 78.4
BcaB08g37252 Brassica carinata HOM05D004337 ORTHO05D005422 4.7e-271 937.6 579 78.2
ECA238G0122 Erigeron canadensis HOM05D004337 ORTHO05D005422 6.2e-271 937.2 576 78.5
AUR62006971 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.1e-270 936.4 611 76.1
Nitab4.5_0004764g0030 Nicotiana tabacum HOM05D004337 ORTHO05D005422 2.4e-270 935.3 560 80.9
Phvul.009G159800 Phaseolus vulgaris HOM05D004337 ORTHO05D005422 2.4e-270 935.3 574 78.6
A10p28250 Brassica napus HOM05D004337 ORTHO05D005422 3.1e-270 934.9 575 78.1
Zm00001eb082160 Zea mays HOM05D004337 ORTHO05D005422 6.9e-270 933.7 581 76.8
HPP92_009218 Vanilla planifolia HOM05D004337 ORTHO05D005422 1.2e-269 932.9 571 78.6
AUR62000615 Chenopodium quinoa HOM05D004337 ORTHO05D005422 1.5e-269 932.6 611 75.3
Rhsim10G0124700 Rhododendron simsii HOM05D004337 ORTHO05D005422 2.0e-269 932.2 672 70.4
Os04g0441900 Oryza sativa ssp. japonica HOM05D004337 ORTHO05D005422 2.6e-269 931.8 553 78.7
Medtr3g098210 Medicago truncatula HOM05D004337 ORTHO05D005422 3.4e-269 931.4 571 78.6
SGA_v2.0_scaffold12G06278 Striga asiatica HOM05D004337 ORTHO05D005422 6.4e-268 927.2 590 76.1
CARHR189960 Cardamine hirsuta HOM05D004337 ORTHO05D005422 1.4e-267 926.0 571 77.1
arahy.Tifrunner.gnm1.ann1.397MFZ Arachis hypogaea HOM05D004337 ORTHO05D005422 1.9e-267 925.6 586 77.0
PSO761G0180 Papaver somniferum HOM05D004337 ORTHO05D005422 4.2e-267 924.5 570 77.4
Thhalv10003872m.g Eutrema salsugineum HOM05D004337 ORTHO05D005422 5.4e-267 924.1 572 76.6
Zm00001eb422980 Zea mays HOM05D004337 ORTHO05D005422 5.4e-267 924.1 576 76.6
PSO210G2848 Papaver somniferum HOM05D004337 ORTHO05D005422 7.8e-266 920.2 578 77.0
Aa31LG3G18040 Aethionema arabicum HOM05D004337 ORTHO05D005422 1.7e-265 919.1 571 77.8
Lj4A821G42 Lonicera japonica HOM05D004337 ORTHO05D005422 1.7e-265 919.1 552 80.1
Nn5g27210 Nelumbo nucifera HOM05D004337 ORTHO05D005422 1.7e-265 919.1 517 84.3
AL6G34865 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 6.6e-265 917.1 571 75.7
BcaB04g19858 Brassica carinata HOM05D004337 ORTHO05D005422 1.9e-264 915.6 572 76.7
HanXRQChr10g0285831 Helianthus annuus HOM05D004337 ORTHO05D005422 3.3e-264 914.8 539 80.1
Sp2g23620 Schrenkiella parvula HOM05D004337 ORTHO05D005422 4.3e-264 914.4 572 75.9
BcaC04g23504 Brassica carinata HOM05D004337 ORTHO05D005422 7.3e-264 913.7 571 75.8
A09p06870 Brassica napus HOM05D004337 ORTHO05D005422 1.6e-263 912.5 571 75.7
BolC9t53677H Brassica oleracea HOM05D004337 ORTHO05D005422 1.6e-263 912.5 571 75.7
C07p43970 Brassica napus HOM05D004337 ORTHO05D005422 2.8e-263 911.8 571 75.3
Carub.0006s2135 Capsella rubella HOM05D004337 ORTHO05D005422 6.2e-263 910.6 571 75.7
AT5G23575 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 8.1e-263 910.2 571 75.1
BraA09t36334Z Brassica rapa HOM05D004337 ORTHO05D005422 1.4e-262 909.4 571 75.7
A06p34530 Brassica napus HOM05D004337 ORTHO05D005422 1.8e-262 909.1 571 75.5
BraA06t26382Z Brassica rapa HOM05D004337 ORTHO05D005422 6.9e-262 907.1 571 75.3
C09p07600 Brassica napus HOM05D004337 ORTHO05D005422 9.0e-262 906.7 571 75.3
BolC7t44925H Brassica oleracea HOM05D004337 ORTHO05D005422 3.4e-261 904.8 571 75.0
Ca_17042_v3 Cicer arietinum L. HOM05D004337 ORTHO05D005422 3.4e-261 904.8 569 77.5
SGA_v2.0_scaffold51G18842 Striga asiatica HOM05D004337 ORTHO05D005422 8.4e-260 900.2 569 77.3
DCAR_009619 Daucus carota HOM05D004337 ORTHO05D005422 2.7e-258 895.2 606 74.4
Dinv10851 Davidia involucrata HOM05D004337 ORTHO05D005422 3.7e-255 884.8 521 82.1
Sp6g34400 Schrenkiella parvula HOM05D004337 ORTHO05D005422 5.8e-253 877.5 579 74.8
AT5G08500 Arabidopsis thaliana HOM05D004337 ORTHO05D005422 1.0e-249 866.7 521 79.1
Duzib264G1201 Durio zibethinus HOM05D004337 ORTHO05D005422 3.0e-249 865.1 589 77.6
Peaxi162Scf00651g00114 Petunia axillaris HOM05D004337 ORTHO05D005422 6.7e-249 864.0 575 74.1
CSS0021638 Camellia sinensis var. sinensis HOM05D004337 ORTHO05D005422 1.7e-244 849.4 496 83.3
Gohir.D12G002000 Gossypium hirsutum HOM05D004337 ORTHO05D005422 1.1e-243 846.7 567 75.1
vmacro12739 Vaccinium macrocarpon HOM05D004337 ORTHO05D005422 5.1e-241 837.8 904 52.7
SMO116G0204 Selaginella moellendorffii HOM05D004337 ORTHO05D005422 3.3e-240 835.1 549 72.9
AL6G18970 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 9.7e-240 833.6 866 52.3
Mapoly0020s0073 Marchantia polymorpha HOM05D004337 ORTHO05D005422 1.1e-238 830.1 549 70.9
Pp3c5_10010 Physcomitrium patens HOM05D004337 ORTHO05D005422 1.0e-212 743.8 561 63.8
Cc00_g00820 Coffea canephora HOM05D004337 ORTHO05D005422 7.2e-211 737.6 405 87.7
Ah.06g188230 Amaranthus hybridus HOM05D004337 ORTHO05D005422 1.6e-210 736.5 532 70.1
CBR_g44530 Chara braunii HOM05D004337 ORTHO05D005422 7.0e-198 694.5 562 58.2
CDE05G2996 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 3.6e-194 682.2 427 74.2
Haze_19353 Corylus avellana HOM05D004337 ORTHO05D005422 3.3e-179 632.5 342 90.4
AL6G18990 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 2.3e-172 609.8 435 70.3
SHI38349 Sapria himalayana HOM05D004337 ORTHO05D005422 5.6e-163 578.6 424 70.5
Cre09.g397900 Chlamydomonas reinhardtii HOM05D004337 ORTHO05D005422 9.6e-155 551.2 565 49.2
ClCG04G002690 Citrullus lanatus HOM05D004337 ORTHO05D005422 3.9e-148 529.3 309 84.8
AL6G19200 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 4.8e-138 495.7 446 61.2
MCO10G243 Micromonas commoda HOM05D004337 ORTHO05D005422 5.5e-118 429.1 352 56.8
PRCOL_00006172 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 4.2e-102 376.3 483 43.1
Haze_27034 Corylus avellana HOM05D004337 ORTHO05D005422 7.2e-102 375.6 381 48.3
Cpa.g.sc138.38 Carica papaya HOM05D004337 ORTHO05D005422 7.4e-99 365.5 212 78.8
Cfa024513 Carpinus fangiana HOM05D004337 ORTHO05D005422 2.9e-95 353.6 516 37.2
Cpa.g.sc3593.1 Carica papaya HOM05D004337 ORTHO05D005422 2.8e-90 337.0 188 87.8
Haze_19352 Corylus avellana HOM05D004337 ORTHO05D005422 1.5e-86 324.7 202 72.3
AL6G19020 Arabidopsis lyrata HOM05D004337 ORTHO05D005422 8.6e-79 298.9 214 67.8
MCO07G426 Micromonas commoda HOM05D004337 ORTHO05D005422 1.8e-76 291.2 616 33.0
SalBow8G1257 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.3e-74 282.3 220 64.1
SalBow8G3722 Salvia bowleyana HOM05D004337 ORTHO05D005422 8.3e-74 282.3 220 64.1
ClCG04G002680 Citrullus lanatus HOM05D004337 ORTHO05D005422 3.6e-69 266.9 158 75.3
Cc00_g00810 Coffea canephora HOM05D004337 ORTHO05D005422 1.0e-68 265.4 166 74.7
PRCOL_00005640 Prasinoderma coloniale HOM05D004337 ORTHO05D005422 1.3e-66 258.5 366 35.2
HPP92_009290 Vanilla planifolia HOM05D004337 ORTHO05D005422 3.0e-55 220.7 230 52.6
CDE05G3583 Ceratophyllum demersum HOM05D004337 ORTHO05D005422 3.1e-44 184.1 111 81.1
Hma1.2p1_0641F.1_g194250 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 4.3e-30 137.1 72 88.9
BcaC04g21668 Brassica carinata HOM05D004337 ORTHO05D021976 5.6e-30 136.7 139 51.8
C09p29160 Brassica napus HOM05D004337 ORTHO05D021976 5.6e-30 136.7 133 53.4
Psat3g077400 Pisum sativum HOM05D004337 ORTHO05D005422 2.8e-29 134.4 122 54.1
Hma1.2p1_0641F.1_g194230 Hydrangea macrophylla HOM05D004337 ORTHO05D005422 6.5e-18 96.7 106 52.8
AUR62044487 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.8e-15 88.6 49 75.5
AUR62044516 Chenopodium quinoa HOM05D004337 ORTHO05D021976 1.8e-15 88.6 49 75.5
SEGI_12766 Sequoiadendron giganteum HOM05D004337 ORTHO05D005422 2.3e-15 88.2 47 78.7
SHI11402 Sapria himalayana HOM05D000039 ORTHO05D006865 7.4e-14 83.2 48 75.0
AUR62038356 Chenopodium quinoa HOM05D001477 ORTHO05D021976 1.3e-13 82.4 43 81.4
CDE05G0837 Ceratophyllum demersum HOM05D004337 ORTHO05D043897 7.6e-11 73.2 47 70.2


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