Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 2.2e-137 492.3 246 100.0
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.4e-125 450.7 246 90.7
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.7e-121 439.5 246 89.8
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 9.3e-120 433.7 246 89.4
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 7.9e-111 404.1 246 82.5
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 2.8e-108 395.6 243 83.1
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 2.8e-108 395.6 243 83.1
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 1.0e-105 387.1 247 79.8
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.0e-105 387.1 247 81.0
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 3.8e-105 385.2 247 80.2
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 6.5e-105 384.4 251 79.7
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 1.9e-104 382.9 247 78.5
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 2.5e-104 382.5 251 79.3
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 3.6e-103 378.6 247 78.9
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 1.5e-101 373.2 238 79.4
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 1.3e-100 370.2 244 77.0
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 4.8e-100 368.2 246 75.6
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 9.1e-99 364.0 244 75.0
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 1.2e-98 363.6 246 75.2
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 2.6e-98 362.5 242 76.0
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 3.4e-98 362.1 207 85.5
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 5.9e-98 361.3 242 76.4
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 2.2e-97 359.4 213 83.6
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 2.2e-97 359.4 236 76.3
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 5.0e-97 358.2 213 82.2
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 1.1e-96 357.1 217 79.7
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 1.9e-96 356.3 231 79.2
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 2.5e-96 355.9 237 77.2
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 3.2e-96 355.5 244 73.4
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 5.5e-96 354.8 247 74.5
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.1e-95 352.8 247 74.5
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 4.7e-95 351.7 198 85.9
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 6.1e-95 351.3 237 75.5
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.0e-94 350.5 208 80.3
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 1.8e-94 349.7 229 75.5
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.8e-94 349.7 247 73.7
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 2.3e-94 349.4 241 72.2
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 2.3e-94 349.4 198 84.8
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.0e-94 349.0 202 83.7
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 8.8e-94 347.4 251 72.9
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 8.8e-94 347.4 199 83.9
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 1.1e-93 347.1 199 83.9
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 1.5e-93 346.7 237 75.1
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 2.6e-93 345.9 211 81.0
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 3.3e-93 345.5 211 79.6
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 2.8e-92 342.4 235 73.2
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 3.7e-92 342.0 230 76.5
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 3.7e-92 342.0 208 78.8
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.8e-92 341.7 235 73.2
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 6.3e-92 341.3 217 76.0
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 1.1e-91 340.5 211 78.7
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 1.4e-91 340.1 198 80.3
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.4e-91 340.1 234 72.6
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 2.4e-91 339.3 242 69.8
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 5.3e-91 338.2 237 71.7
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 9.1e-91 337.4 227 72.2
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 1.2e-90 337.0 200 80.5
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.6e-90 336.7 233 74.2
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 4.5e-90 335.1 246 70.3
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 5.9e-90 334.7 229 74.2
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 7.7e-90 334.3 232 74.6
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 1.7e-89 333.2 215 77.2
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 1.7e-89 333.2 196 81.1
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 1.7e-89 333.2 254 68.9
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 2.2e-89 332.8 244 70.9
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 6.5e-89 331.3 212 76.9
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 6.5e-89 331.3 212 76.9
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.5e-88 330.1 204 77.5
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 1.9e-88 329.7 242 69.0
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 5.5e-88 328.2 227 71.8
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 7.2e-88 327.8 212 75.9
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 7.2e-88 327.8 211 77.7
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 9.4e-88 327.4 229 69.9
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 9.4e-88 327.4 212 75.9
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 9.4e-88 327.4 242 69.0
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.2e-87 327.0 212 75.9
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 4.7e-87 325.1 213 74.2
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 6.1e-87 324.7 198 78.3
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.0e-87 324.3 207 74.9
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 1.4e-86 323.6 217 73.7
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 1.8e-86 323.2 207 74.4
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.0e-85 319.7 217 75.1
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 2.2e-84 316.2 202 76.7
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.8e-83 313.2 210 76.7
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.8e-83 313.2 237 67.9
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 2.0e-82 309.7 195 74.9
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 1.0e-81 307.4 192 79.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 9.4e-80 300.8 194 70.6
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 2.7e-79 299.3 201 71.1
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 8.0e-79 297.7 191 71.2
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 1.5e-69 266.9 191 64.4
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 7.7e-66 254.6 240 60.4
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 5.0e-65 251.9 150 80.7
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 1.6e-63 246.9 176 73.3
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 4.7e-63 245.4 240 59.6
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.8e-59 233.4 129 87.6
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 5.6e-56 221.9 161 70.2
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.7e-52 210.3 245 52.7
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.9e-52 209.5 159 65.4
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 7.3e-48 194.9 210 47.6
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 8.1e-47 191.4 154 59.1
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 7.1e-43 178.3 205 44.9
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 2.1e-42 176.8 131 64.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.3e-41 174.1 119 72.3
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 3.9e-41 172.6 143 68.5
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 4.0e-38 162.5 100 84.0
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.2e-38 162.2 133 66.9
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 4.4e-37 159.1 112 69.6
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 1.3e-33 147.5 122 59.0
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 5.1e-33 145.6 236 37.3
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.5e-32 144.1 98 69.4
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 1.2e-31 141.0 110 67.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.7e-31 139.0 136 49.3
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 3.1e-30 136.3 135 58.5
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 6.9e-30 135.2 187 39.6
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 9.9e-21 104.8 71 63.4
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 6.0e-18 95.5 52 80.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.1e-14 84.7 51 76.5
vmacro18230 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 9.9e-13 78.2 60 60.0
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.7e-12 77.4 64 57.8
vmacro18321 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 4.9e-12 75.9 55 58.2
vmacro18566 Vaccinium macrocarpon HOM05D006387 ORTHO05D011088 6.4e-12 75.5 51 64.7
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 2.3e-09 67.0 43 76.7
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 3.9e-09 66.2 68 54.4
Ah.03g140070 Amaranthus hybridus HOM05D006387 ORTHO05D008533 2.5e-08 63.5 50 68.0


User provided reference genes

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