Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.9e-44 182.2 94 100.0
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 9.3e-36 153.3 94 88.3
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.8e-34 149.1 95 86.3
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.3e-32 142.9 95 85.3
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 1.3e-32 142.9 95 85.3
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 4.8e-32 141.0 95 84.2
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.2e-29 132.1 96 76.0
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 7.1e-28 127.1 97 73.2
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.5e-27 124.8 94 73.4
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 8.7e-26 120.2 93 74.2
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 4.3e-25 117.9 91 72.5
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.6e-24 115.9 93 69.9
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.2e-24 114.0 90 70.0
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.1e-23 113.2 92 71.7
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 4.0e-23 111.3 98 66.3
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.0e-23 110.2 90 67.8
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 9.0e-23 110.2 90 67.8
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.2e-22 109.8 97 62.9
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 1.2e-22 109.8 91 71.4
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.5e-22 109.4 94 63.8
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 2.0e-22 109.0 90 67.8
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.0e-22 109.0 90 67.8
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 5.8e-22 107.5 97 64.9
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 7.6e-22 107.1 87 69.0
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 7.6e-22 107.1 87 69.0
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 7.6e-22 107.1 94 66.0
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.7e-21 105.9 96 60.4
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.7e-21 105.9 96 60.4
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 1.7e-21 105.9 96 60.4
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.7e-21 105.9 93 63.4
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.2e-21 105.5 105 60.0
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 2.2e-21 105.5 96 62.5
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 2.2e-21 105.5 96 61.5
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.9e-21 105.1 94 63.8
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 3.8e-21 104.8 94 63.8
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 3.8e-21 104.8 100 68.0
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 4.9e-21 104.4 96 60.4
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 4.9e-21 104.4 91 61.5
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 6.5e-21 104.0 95 62.1
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 1.4e-20 102.8 95 62.1
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.5e-20 100.9 93 63.4
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 5.5e-20 100.9 93 63.4
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 5.5e-20 100.9 88 62.5
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.2e-19 99.8 86 65.1
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 1.6e-19 99.4 89 59.6
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 2.1e-19 99.0 97 57.7
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 2.7e-19 98.6 93 68.8
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.7e-19 98.6 98 56.1
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 3.5e-19 98.2 96 62.5
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 4.6e-19 97.8 89 60.7
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 6.0e-19 97.4 100 60.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.8e-18 95.9 99 54.5
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.3e-18 95.5 89 59.6
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 3.0e-18 95.1 91 57.1
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 3.9e-18 94.7 99 57.6
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 5.1e-18 94.4 94 58.5
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 6.7e-18 94.0 91 59.3
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 3.3e-17 91.7 92 60.9
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 3.3e-17 91.7 97 57.7
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 4.3e-17 91.3 67 74.6
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.2e-16 89.0 83 65.1
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 8.2e-16 87.0 77 67.5
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.8e-15 85.9 90 55.6
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.1e-15 84.7 92 54.3
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 5.3e-15 84.3 68 67.6
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 9.0e-15 83.6 97 53.6
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 4.5e-14 81.3 87 58.6
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 7.7e-14 80.5 91 53.8
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 7.7e-14 80.5 92 54.3
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 6.5e-13 77.4 96 50.0
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.1e-12 76.6 84 54.8
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 2.7e-11 72.0 63 63.5
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.8e-10 69.3 79 55.7
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 5.7e-09 64.3 99 45.5
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.4e-07 59.7 50 66.0
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 2.0e-06 55.8 91 46.2


User provided reference genes

Program Settings