Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G089300 Theobroma cacao HOM05D004648 ORTHO05D005782 7.2e-108 394.0 217 100.0
COL.COLO4_27367 Corchorus olitorius HOM05D004648 ORTHO05D005782 2.5e-84 315.8 220 80.0
Duzib264G0833 Durio zibethinus HOM05D004648 ORTHO05D005782 9.5e-84 313.9 214 79.4
Gorai.007G058400 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.0e-82 310.5 213 78.4
Gohir.A11G050200 Gossypium hirsutum HOM05D004648 ORTHO05D005782 5.8e-81 304.7 212 75.9
Gohir.D11G053600 Gossypium hirsutum HOM05D004648 ORTHO05D005782 9.8e-81 303.9 214 77.1
RcHm_v2.0_Chr2g0111021 Rosa chinensis HOM05D004648 ORTHO05D005782 4.1e-63 245.4 216 65.3
CiPaw.07G046500 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.1e-60 237.3 215 61.4
Prupe.6G203100 Prunus persica HOM05D004648 ORTHO05D005782 1.5e-60 236.9 213 61.5
FvH4_1g19520 Fragaria vesca HOM05D004648 ORTHO05D005782 4.3e-60 235.3 216 63.0
Cfa006874 Carpinus fangiana HOM05D004648 ORTHO05D005782 2.8e-59 232.6 213 64.8
Haze_03885 Corylus avellana HOM05D004648 ORTHO05D005782 4.0e-58 228.8 213 62.9
MD15G1310800 Malus domestica HOM05D004648 ORTHO05D005782 4.4e-57 225.3 213 58.7
QL06p035918 Quercus lobata HOM05D004648 ORTHO05D005782 1.3e-56 223.8 212 59.9
Manes.13G100500 Manihot esculenta HOM05D004648 ORTHO05D005782 1.2e-54 217.2 211 58.3
Rhsim10G0173500 Rhododendron simsii HOM05D004648 ORTHO05D005782 4.8e-51 205.3 218 56.0
Dinv13591 Davidia involucrata HOM05D004648 ORTHO05D005782 6.2e-51 204.9 200 58.5
Carub.0008s2638 Capsella rubella HOM05D004648 ORTHO05D005782 1.8e-50 203.4 208 55.3
CSS0033796 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 3.1e-50 202.6 214 53.3
CSS0043130 Camellia sinensis var. sinensis HOM05D004648 ORTHO05D005782 5.3e-50 201.8 214 53.3
TAR376G0132 Trochodendron aralioides HOM05D004648 ORTHO05D005782 5.3e-50 201.8 214 53.3
Hma1.2p1_0802F.1_g220630 Hydrangea macrophylla HOM05D004648 ORTHO05D005782 4.5e-49 198.7 212 55.2
AL8G43110 Arabidopsis lyrata HOM05D004648 ORTHO05D005782 7.6e-49 198.0 202 55.0
AT5G65520 Arabidopsis thaliana HOM05D004648 ORTHO05D005782 7.6e-49 198.0 201 54.7
Sc16g0000570 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.6e-49 198.0 213 53.1
Nitab4.5_0010932g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 1.7e-48 196.8 214 51.9
TWI74G0279 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 2.2e-48 196.4 214 53.7
Nn5g29856 Nelumbo nucifera HOM05D004648 ORTHO05D005782 4.9e-48 195.3 213 50.7
Actinidia06509 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.1e-47 194.1 213 54.0
Ah.03g139860 Amaranthus hybridus HOM05D004648 ORTHO05D005782 1.4e-47 193.7 212 51.4
AUR62017983 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.4e-47 193.7 216 50.5
THA.LOC104801678 Tarenaya hassleriana HOM05D004648 ORTHO05D005782 2.4e-47 193.0 222 49.5
CANSAT01G3166 Cannabis sativa HOM05D004648 ORTHO05D005782 7.1e-47 191.4 214 49.1
CARHR279500 Cardamine hirsuta HOM05D004648 ORTHO05D005782 9.3e-47 191.0 207 52.7
Sopen11g005530 Solanum pennellii HOM05D004648 ORTHO05D005782 2.1e-46 189.9 214 52.3
EL10Ac6g15193 Beta vulgaris HOM05D004648 ORTHO05D005782 1.0e-45 187.6 212 49.5
Cc07_g14000 Coffea canephora HOM05D004648 ORTHO05D005782 1.0e-45 187.6 216 50.0
DCAR_003444 Daucus carota HOM05D004648 ORTHO05D005782 1.0e-45 187.6 204 52.0
BcaB04g20019 Brassica carinata HOM05D004648 ORTHO05D005782 1.8e-45 186.8 207 51.2
Thhalv10005489m.g Eutrema salsugineum HOM05D004648 ORTHO05D005782 1.8e-45 186.8 201 53.2
Solyc11g010720.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 2.3e-45 186.4 214 51.4
Aqoxy6G00847 Aquilegia oxysepala HOM05D004648 ORTHO05D005782 3.0e-45 186.0 215 48.4
PGSC0003DMG400016127 Solanum tuberosum HOM05D004648 ORTHO05D005782 3.9e-45 185.7 214 50.5
BcaC04g23260 Brassica carinata HOM05D004648 ORTHO05D005782 1.1e-44 184.1 197 52.3
BolC9t53956H Brassica oleracea HOM05D004648 ORTHO05D005782 1.1e-44 184.1 197 52.3
A09p09070 Brassica napus HOM05D004648 ORTHO05D005782 1.5e-44 183.7 197 52.8
AUR62003673 Chenopodium quinoa HOM05D004648 ORTHO05D005782 1.5e-44 183.7 216 49.1
Sp2g28620 Schrenkiella parvula HOM05D004648 ORTHO05D005782 3.3e-44 182.6 196 53.1
BraA09t36559Z Brassica rapa HOM05D004648 ORTHO05D005782 7.4e-44 181.4 197 52.3
SGA_v2.0_scaffold45G17227 Striga asiatica HOM05D004648 ORTHO05D005782 7.4e-44 181.4 213 48.8
C09p10560 Brassica napus HOM05D004648 ORTHO05D005782 4.8e-43 178.7 195 51.8
SalBow5G0620 Salvia bowleyana HOM05D004648 ORTHO05D005782 1.1e-42 177.6 214 47.2
PSO541G6255 Papaver somniferum HOM05D004648 ORTHO05D005782 3.1e-42 176.0 213 45.5
Peaxi162Scf00085g00235 Petunia axillaris HOM05D004648 ORTHO05D005782 3.1e-42 176.0 201 51.2
unitig_748.g7247 Utricularia gibba HOM05D000258 ORTHO05D001416 4.0e-42 175.6 214 48.6
SalBow5G1021 Salvia bowleyana HOM05D004648 ORTHO05D005782 6.9e-42 174.9 214 46.7
CAN.G252.11 Capsicum annuum HOM05D004648 ORTHO05D005782 9.0e-42 174.5 215 47.0
Duzib093G0339 Durio zibethinus HOM05D004648 ORTHO05D005782 9.0e-42 174.5 215 49.3
Cpa.g.sc21.29 Carica papaya HOM05D004648 ORTHO05D005782 1.2e-41 174.1 214 46.3
CANSAT25G1975 Cannabis sativa HOM05D004648 ORTHO05D005782 7.6e-41 171.4 216 44.9
Thecc.08G072400 Theobroma cacao HOM05D004648 ORTHO05D005782 1.3e-40 170.6 214 47.7
ClCG08G011630 Citrullus lanatus HOM05D004648 ORTHO05D005782 2.2e-40 169.9 217 43.8
MELO3C011082.2 Cucumis melo HOM05D004648 ORTHO05D005782 2.9e-40 169.5 217 44.2
Atru.chr13.996 Acer truncatum HOM05D004648 ORTHO05D005782 3.8e-40 169.1 216 44.0
COL.COLO4_35262 Corchorus olitorius HOM05D004648 ORTHO05D005782 4.9e-40 168.7 215 47.4
Gorai.009G228900 Gossypium raimondii HOM05D004648 ORTHO05D005782 1.1e-39 167.5 214 47.2
CiPaw.08G056600 Carya illinoinensis HOM05D004648 ORTHO05D005782 1.4e-39 167.2 213 46.0
CsaV3_2G030200 Cucumis sativus L. HOM05D004648 ORTHO05D005782 1.4e-39 167.2 216 44.0
Migut.K00806 Erythranthe guttata HOM05D004648 ORTHO05D005782 4.2e-39 165.6 213 44.6
Phvul.003G288400 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 7.1e-39 164.9 219 46.1
Gohir.D05G221700 Gossypium hirsutum HOM05D004648 ORTHO05D005782 2.1e-38 163.3 214 46.7
MBI16_g31265_MAGBIO Magnolia biondii HOM05D004648 ORTHO05D005782 7.9e-38 161.4 205 46.3
Gohir.A05G219000 Gossypium hirsutum HOM05D004648 ORTHO05D005782 1.0e-37 161.0 214 46.3
Sed0006831 Sechium edule HOM05D004648 ORTHO05D005782 2.3e-37 159.8 217 42.4
arahy.Tifrunner.gnm1.ann1.AB919Y Arachis hypogaea HOM05D004648 ORTHO05D005782 6.7e-37 158.3 215 46.0
arahy.Tifrunner.gnm1.ann1.S42CYX Arachis hypogaea HOM05D004648 ORTHO05D005782 8.7e-37 157.9 215 45.6
Duzib041G0289 Durio zibethinus HOM05D004648 ORTHO05D005782 8.7e-37 157.9 214 45.3
Nitab4.5_0000131g0120 Nicotiana tabacum HOM05D000239 ORTHO05D000484 1.5e-36 157.1 216 42.6
Oeu054771.1 Olea europaea HOM05D004648 ORTHO05D005782 1.5e-36 157.1 218 44.0
PGSC0003DMG401009338 Solanum tuberosum HOM05D004648 ORTHO05D005782 5.6e-36 155.2 216 41.7
Sabra02G0087800 Salix brachista HOM05D004648 ORTHO05D005782 9.6e-36 154.5 214 43.5
TAR628G0215 Trochodendron aralioides HOM05D004648 ORTHO05D005782 9.6e-36 154.5 214 42.1
Prupe.1G533800 Prunus persica HOM05D004648 ORTHO05D005782 2.8e-35 152.9 219 41.6
Cfa013807 Carpinus fangiana HOM05D004648 ORTHO05D005782 4.8e-35 152.1 213 42.7
Sopen04g030220 Solanum pennellii HOM05D004648 ORTHO05D005782 1.1e-34 151.0 216 41.7
Eucgr.F00428 Eucalyptus grandis HOM05D004648 ORTHO05D005782 1.4e-34 150.6 209 42.6
Nitab4.5_0011537g0010 Nicotiana tabacum HOM05D004648 ORTHO05D005782 3.1e-34 149.4 216 42.1
Solyc04g076470.1 Solanum lycopersicum HOM05D004648 ORTHO05D005782 3.1e-34 149.4 216 41.2
Glyma.04G095900 Glycine max HOM05D004648 ORTHO05D005782 6.9e-34 148.3 219 42.9
Lj4g0004938 Lotus japonicus HOM05D004648 ORTHO05D005782 6.9e-34 148.3 212 45.3
Lj1g0017346 Lotus japonicus HOM05D004648 ORTHO05D005782 1.2e-33 147.5 216 42.1
QL09p018000 Quercus lobata HOM05D004648 ORTHO05D005782 1.2e-33 147.5 217 43.3
Ciclev10002461m.g Citrus clementina HOM05D004648 ORTHO05D005782 2.0e-33 146.7 211 40.3
RcHm_v2.0_Chr7g0235251 Rosa chinensis HOM05D004648 ORTHO05D005782 2.0e-33 146.7 219 39.7
MD15G1387400 Malus domestica HOM05D004648 ORTHO05D005782 4.5e-33 145.6 215 38.6
Glyma.08G278900 Glycine max HOM05D004648 ORTHO05D005782 7.6e-33 144.8 228 42.5
Glyma.06G097600 Glycine max HOM05D004648 ORTHO05D005782 1.0e-32 144.4 219 41.6
Manes.05G189800 Manihot esculenta HOM05D004648 ORTHO05D005782 1.3e-32 144.1 215 41.9
Peaxi162Scf00454g10013 Petunia axillaris HOM05D004648 ORTHO05D005782 2.2e-32 143.3 217 39.6
Psat5g049360 Pisum sativum HOM05D004648 ORTHO05D005782 3.8e-32 142.5 212 42.5
Cc10_g08430 Coffea canephora HOM05D004648 ORTHO05D005782 4.9e-32 142.1 214 39.3
Ca_16010_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 1.4e-31 140.6 212 41.5
Lalb_Chr04g0252771 Lupinus albus HOM05D004648 ORTHO05D005782 1.4e-31 140.6 221 39.8
PGR042G2328 Punica granatum HOM05D004648 ORTHO05D005782 1.4e-31 140.6 212 41.0
MSTRG.24425 Avicennia marina HOM05D004648 ORTHO05D005782 1.9e-31 140.2 218 43.1
Potri.002G111300 Populus trichocarpa HOM05D004648 ORTHO05D005782 1.9e-31 140.2 214 39.7
HanXRQChr09g0250941 Helianthus annuus HOM05D004648 ORTHO05D005782 3.2e-31 139.4 213 39.4
TPR.G6370 Trifolium pratense HOM05D004648 ORTHO05D005782 3.2e-31 139.4 212 42.5
HPP92_003649 Vanilla planifolia HOM05D004648 ORTHO05D005782 3.2e-31 139.4 219 41.6
Psat4g116960 Pisum sativum HOM05D004648 ORTHO05D005782 4.2e-31 139.0 225 40.0
Medtr8g068400 Medicago truncatula HOM05D004648 ORTHO05D005782 5.5e-31 138.7 214 42.1
ATR0767G042 Amborella trichopoda HOM05D004648 ORTHO05D005782 9.3e-31 137.9 216 41.2
VMungo1309G1710 Vigna mungo HOM05D004648 ORTHO05D005782 1.2e-30 137.5 215 39.5
MD08G1200200 Malus domestica HOM05D004648 ORTHO05D005782 2.1e-30 136.7 219 38.4
vmacro04645 Vaccinium macrocarpon HOM05D004648 ORTHO05D005782 2.7e-30 136.3 222 37.4
Medtr3g100100 Medicago truncatula HOM05D004648 ORTHO05D005782 3.5e-30 136.0 212 42.0
Zm00001eb235460 Zea mays HOM05D004648 ORTHO05D005782 6.0e-30 135.2 214 40.2
Lj4C87T6 Lonicera japonica HOM05D004648 ORTHO05D005782 1.0e-29 134.4 176 44.3
TWI12G1102 Tripterygium wilfordii HOM05D004648 ORTHO05D005782 1.0e-29 134.4 216 40.7
Actinidia19623 Actinidia chinensis HOM05D004648 ORTHO05D005782 1.8e-29 133.7 202 39.6
Migut.N02848 Erythranthe guttata HOM05D004648 ORTHO05D005782 1.1e-28 131.0 214 41.6
Phvul.009G035900 Phaseolus vulgaris HOM05D004648 ORTHO05D005782 1.1e-28 131.0 218 38.5
CAN.G475.10 Capsicum annuum HOM05D004648 ORTHO05D005782 1.5e-28 130.6 223 37.2
ECA247G1048 Erigeron canadensis HOM05D004648 ORTHO05D005782 1.5e-28 130.6 213 39.0
Ca_22619_v3 Cicer arietinum L. HOM05D004648 ORTHO05D005782 9.6e-28 127.9 190 43.2
FvH4_5g34561 Fragaria vesca HOM05D004648 ORTHO05D005782 1.6e-27 127.1 223 37.2
ECA232G0149 Erigeron canadensis HOM05D000476 ORTHO05D005719 2.8e-27 126.3 169 45.0
DCAR_009556 Daucus carota HOM05D004648 ORTHO05D005782 3.7e-27 125.9 211 37.9
Lju188C4T4 Lonicera japonica HOM05D004648 ORTHO05D005782 6.3e-27 125.2 219 40.2
Lalb_Chr08g0242581 Lupinus albus HOM05D004648 ORTHO05D005782 8.2e-27 124.8 226 37.6
Sc26g0003620 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.1e-26 124.4 212 39.2
Rhsim07G0212500 Rhododendron simsii HOM05D004648 ORTHO05D005782 3.1e-26 122.9 205 39.0
SGA_v2.0_scaffold48G17844 Striga asiatica HOM05D004648 ORTHO05D005782 3.1e-26 122.9 212 40.6
Glyma.14G182600 Glycine max HOM05D004648 ORTHO05D005782 4.5e-25 119.0 214 38.8
Os02g0204000 Oryza sativa ssp. japonica HOM05D004648 ORTHO05D005782 4.5e-25 119.0 146 47.3
HanXRQChr02g0046211 Helianthus annuus HOM05D004648 ORTHO05D005782 1.7e-24 117.1 214 37.4
SEGI_08621 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 1.1e-23 114.4 210 39.5
SEGI_01557 Sequoiadendron giganteum HOM05D004648 ORTHO05D005782 2.5e-23 113.2 219 36.5
Lsat_1_v5_gn_8_20321 Lactuca sativa HOM05D004648 ORTHO05D005782 5.5e-23 112.1 216 33.8
CDE04G0511 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 3.6e-22 109.4 206 34.5
HanXRQChr15g0485271 Helianthus annuus HOM05D004648 ORTHO05D005782 7.9e-22 108.2 188 38.3
CDE02G1147 Ceratophyllum demersum HOM05D004648 ORTHO05D005782 1.3e-21 107.5 193 34.7
Ah.05g171370 Amaranthus hybridus HOM05D004648 ORTHO05D005782 3.0e-21 106.3 221 38.0
VMungo0647G0422 Vigna mungo HOM05D004648 ORTHO05D005782 1.1e-20 104.4 213 34.7
EL10Ac1g00504 Beta vulgaris HOM05D004648 ORTHO05D005782 1.8e-18 97.1 220 34.5
Mapoly0104s0024 Marchantia polymorpha HOM05D004648 ORTHO05D005782 2.0e-17 93.6 214 30.8
EL10Ac2g03122 Beta vulgaris HOM05D004648 ORTHO05D005782 1.0e-16 91.3 117 44.4
AagrBONN_evm.TU.Sc2ySwM_368.397 Anthoceros agrestis HOM05D004648 ORTHO05D005782 2.2e-16 90.1 213 31.5
DCAR_009557 Daucus carota HOM05D004648 ORTHO05D005782 1.9e-15 87.0 119 42.9
Sc26g0002990 Simmondsia chinensis HOM05D004648 ORTHO05D005782 7.9e-14 81.6 137 38.7
Sc26g0002870 Simmondsia chinensis HOM05D004648 ORTHO05D005782 1.3e-11 74.3 136 36.0
FAN28G2101 Fragaria x ananassa HOM05D004648 ORTHO05D005782 1.4e-10 70.9 60 61.7
BolC6t39019H Brassica oleracea HOM05D004648 ORTHO05D031748 1.0e-08 64.7 64 51.6


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