Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G060000 Theobroma cacao HOM05D004652 ORTHO05D005634 1.2e-180 636.3 316 100.0
Duzib147G0331 Durio zibethinus HOM05D004652 ORTHO05D005634 7.7e-159 563.9 304 90.1
Gohir.A11G195100 Gossypium hirsutum HOM05D004652 ORTHO05D005634 7.0e-152 540.8 304 87.8
Gorai.007G215700 Gossypium raimondii HOM05D004652 ORTHO05D005634 9.1e-152 540.4 304 87.5
GSVIVG01022087001 Vitis vinifera HOM05D004652 ORTHO05D005634 9.1e-144 513.8 304 80.6
CiPaw.01G015500 Carya illinoinensis HOM05D004652 ORTHO05D005634 4.5e-143 511.5 304 80.6
arahy.Tifrunner.gnm1.ann1.8Y90C0 Arachis hypogaea HOM05D004652 ORTHO05D005634 8.5e-142 507.3 305 78.4
Ciclev10025986m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.1e-141 506.9 304 81.9
Cpa.g.sc55.119 Carica papaya HOM05D004652 ORTHO05D005634 1.5e-141 506.5 303 79.2
arahy.Tifrunner.gnm1.ann1.EFTP1R Arachis hypogaea HOM05D004652 ORTHO05D005634 3.2e-141 505.4 305 78.4
Nn5g30355 Nelumbo nucifera HOM05D004652 ORTHO05D005634 5.5e-141 504.6 302 79.5
Lj7A73G20 Lonicera japonica HOM05D004652 ORTHO05D005634 7.2e-141 504.2 304 78.6
CiPaw.01G015800 Carya illinoinensis HOM05D004652 ORTHO05D005634 1.6e-140 503.1 304 79.3
QL06p040720 Quercus lobata HOM05D004652 ORTHO05D005634 1.6e-140 503.1 303 79.2
Dinv30009 Davidia involucrata HOM05D004652 ORTHO05D005634 2.7e-140 502.3 304 78.9
Haze_15373 Corylus avellana HOM05D004652 ORTHO05D005634 3.6e-140 501.9 334 73.4
Gohir.D11G201200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 8.0e-140 500.7 285 86.3
CSS0025726 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.8e-139 499.6 304 78.3
GSVIVG01031712001 Vitis vinifera HOM05D004652 ORTHO05D005634 4.4e-138 495.0 304 77.6
Actinidia36476 Actinidia chinensis HOM05D004652 ORTHO05D005634 2.8e-137 492.3 304 76.0
RcHm_v2.0_Chr2g0106191 Rosa chinensis HOM05D004652 ORTHO05D005634 2.8e-137 492.3 304 78.0
Hma1.2p1_0670F.1_g200440 Hydrangea macrophylla HOM05D004652 ORTHO05D005634 3.7e-137 491.9 304 77.3
MD02G1175800 Malus domestica HOM05D004652 ORTHO05D005634 3.7e-137 491.9 304 78.6
TWI09G0879 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 8.3e-137 490.7 303 78.9
Phvul.002G017100 Phaseolus vulgaris HOM05D004652 ORTHO05D005634 1.1e-136 490.3 304 76.3
PGR102G1991 Punica granatum HOM05D004652 ORTHO05D005634 1.1e-136 490.3 303 77.2
Manes.13G121100 Manihot esculenta HOM05D004652 ORTHO05D005634 1.4e-136 490.0 304 78.0
Lj2g0023089 Lotus japonicus HOM05D004652 ORTHO05D005634 1.8e-136 489.6 304 75.3
Potri.007G045900 Populus trichocarpa HOM05D004652 ORTHO05D005634 1.8e-136 489.6 303 77.2
FvH4_1g16330 Fragaria vesca HOM05D004652 ORTHO05D005634 2.4e-136 489.2 304 77.0
FAN23G0595 Fragaria x ananassa HOM05D004652 ORTHO05D005634 5.3e-136 488.0 304 76.6
Glyma.11G054000 Glycine max HOM05D004652 ORTHO05D005634 5.3e-136 488.0 304 76.3
CANSAT25G2702 Cannabis sativa HOM05D004652 ORTHO05D005634 7.0e-136 487.6 304 75.7
FAN19G0057 Fragaria x ananassa HOM05D004652 ORTHO05D005634 9.1e-136 487.3 304 76.6
PGSC0003DMG400004028 Solanum tuberosum HOM05D004652 ORTHO05D005634 9.1e-136 487.3 304 75.0
Lalb_Chr05g0213341 Lupinus albus HOM05D004652 ORTHO05D005634 1.2e-135 486.9 304 74.7
VMungo1215G2858 Vigna mungo HOM05D004652 ORTHO05D005634 1.6e-135 486.5 304 75.0
MELO3C020851.2 Cucumis melo HOM05D004652 ORTHO05D005634 2.7e-135 485.7 304 75.7
Cc07_g06170 Coffea canephora HOM05D004652 ORTHO05D005634 3.5e-135 485.3 304 74.3
Glyma.01G188100 Glycine max HOM05D004652 ORTHO05D005634 4.5e-135 485.0 304 75.0
PSO675G7477 Papaver somniferum HOM05D004652 ORTHO05D005634 5.9e-135 484.6 304 74.7
Atru.chr5.2643 Acer truncatum HOM05D004652 ORTHO05D005634 1.0e-134 483.8 304 75.0
Atru.chr5.2649 Acer truncatum HOM05D004652 ORTHO05D005634 1.0e-134 483.8 304 75.0
Nitab4.5_0001221g0030 Nicotiana tabacum HOM05D004652 ORTHO05D005634 1.7e-134 483.0 304 75.0
Peaxi162Scf00549g00023 Petunia axillaris HOM05D004652 ORTHO05D005634 2.2e-134 482.6 304 73.7
Sopen02g037740 Solanum pennellii HOM05D004652 ORTHO05D005634 2.2e-134 482.6 303 73.9
CsaV3_2G016420 Cucumis sativus L. HOM05D004652 ORTHO05D005634 2.9e-134 482.3 304 75.3
Solyc02g093170.4 Solanum lycopersicum HOM05D004652 ORTHO05D005634 3.8e-134 481.9 304 73.7
Actinidia12037 Actinidia chinensis HOM05D004652 ORTHO05D005634 8.5e-134 480.7 333 70.6
TPR.G19549 Trifolium pratense HOM05D004652 ORTHO05D005634 8.5e-134 480.7 302 74.5
Psat3g034240 Pisum sativum HOM05D004652 ORTHO05D005634 4.2e-133 478.4 304 74.0
AUR62013234 Chenopodium quinoa HOM05D004652 ORTHO05D005634 9.4e-133 477.2 304 74.7
Medtr7g104350 Medicago truncatula HOM05D004652 ORTHO05D005634 9.4e-133 477.2 304 74.0
Aqoxy6G01262 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 4.7e-132 474.9 300 75.3
ECA232G0198 Erigeron canadensis HOM05D004652 ORTHO05D005634 6.1e-132 474.6 304 74.0
FAN28G0632 Fragaria x ananassa HOM05D004652 ORTHO05D005634 8.0e-132 474.2 308 74.4
Nitab4.5_0002765g0060 Nicotiana tabacum HOM05D004652 ORTHO05D005634 8.0e-132 474.2 306 73.9
CSS0033708 Camellia sinensis var. sinensis HOM05D004652 ORTHO05D005634 1.4e-131 473.4 289 78.2
Atru.chr3.293 Acer truncatum HOM05D004652 ORTHO05D005634 2.3e-131 472.6 306 76.1
DCAR_010876 Daucus carota HOM05D004652 ORTHO05D005634 5.2e-131 471.5 304 73.7
TWI31G1310 Tripterygium wilfordii HOM05D004652 ORTHO05D005634 5.2e-131 471.5 304 73.4
Sed0013827 Sechium edule HOM05D004652 ORTHO05D005634 8.8e-131 470.7 305 73.8
MSTRG.23735 Avicennia marina HOM05D004652 ORTHO05D005634 1.5e-130 469.9 305 72.1
Sc07g0000730 Simmondsia chinensis HOM05D004652 ORTHO05D005634 2.6e-130 469.2 302 74.2
HanXRQChr15g0490761 Helianthus annuus HOM05D004652 ORTHO05D005634 3.4e-130 468.8 305 73.8
Potri.009G099600 Populus trichocarpa HOM05D004652 ORTHO05D005634 5.7e-130 468.0 304 73.4
Thecc.02G103600 Theobroma cacao HOM05D004652 ORTHO05D005634 2.8e-129 465.7 304 74.3
Sabra09G0075900 Salix brachista HOM05D004652 ORTHO05D005634 4.8e-129 464.9 304 72.7
Lsat_1_v5_gn_4_165120 Lactuca sativa HOM05D004652 ORTHO05D005634 8.3e-129 464.2 304 73.4
Ciclev10030127m.g Citrus clementina HOM05D004652 ORTHO05D005634 1.1e-128 463.8 304 71.4
Gohir.A13G042200 Gossypium hirsutum HOM05D004652 ORTHO05D005634 1.1e-128 463.8 304 73.0
Gorai.013G045700 Gossypium raimondii HOM05D004652 ORTHO05D005634 1.4e-128 463.4 304 72.7
Eucgr.I01131 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.6e-127 459.9 307 72.6
Sabra07G0041100 Salix brachista HOM05D004652 ORTHO05D005634 2.0e-127 459.5 338 67.2
unitig_736.g22389 Utricularia gibba HOM05D004652 ORTHO05D005634 2.7e-127 459.1 306 68.6
Migut.H00415 Erythranthe guttata HOM05D004652 ORTHO05D005634 5.9e-127 458.0 303 70.0
Duzib132G1249 Durio zibethinus HOM05D004652 ORTHO05D005634 1.7e-126 456.4 304 71.1
THA.LOC104807263 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 1.2e-124 450.3 304 70.1
AT2G23370 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 1.6e-124 449.9 303 71.0
Thhalv10025679m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 6.1e-124 448.0 303 70.6
CDE02G2369 Ceratophyllum demersum HOM05D004652 ORTHO05D005634 5.2e-123 444.9 306 70.3
Eucgr.H01690 Eucalyptus grandis HOM05D004652 ORTHO05D005634 5.2e-123 444.9 313 68.7
BolC8t51563H Brassica oleracea HOM05D004652 ORTHO05D005634 8.9e-123 444.1 303 70.6
COL.COLO4_24563 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.2e-122 443.7 260 84.2
SGA_v2.0_scaffold143G35809 Striga asiatica HOM05D004652 ORTHO05D005634 1.2e-122 443.7 279 74.2
THA.LOC104807591 Tarenaya hassleriana HOM05D004652 ORTHO05D005634 2.6e-122 442.6 304 71.4
AL7G17310 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 3.4e-122 442.2 304 70.1
AUR62010252 Chenopodium quinoa HOM05D004652 ORTHO05D005634 7.5e-122 441.0 279 75.3
Hund13540 Selenicereus undatus HOM05D004652 ORTHO05D005634 9.8e-122 440.7 301 69.1
EL10Ac9g22324 Beta vulgaris HOM05D004652 ORTHO05D005634 1.3e-121 440.3 348 62.9
BcaC07g40988 Brassica carinata HOM05D004652 ORTHO05D005634 1.7e-121 439.9 303 70.3
C08p39900 Brassica napus HOM05D004652 ORTHO05D005634 1.7e-121 439.9 303 70.3
A09p56940 Brassica napus HOM05D004652 ORTHO05D005634 2.2e-121 439.5 303 70.0
CARHR293000 Cardamine hirsuta HOM05D004652 ORTHO05D005634 2.8e-121 439.1 303 69.6
BraA09t41086Z Brassica rapa HOM05D004652 ORTHO05D005634 3.7e-121 438.7 303 70.0
Sp7g31800 Schrenkiella parvula HOM05D004652 ORTHO05D005634 3.7e-121 438.7 303 69.6
Carub.0004s0257 Capsella rubella HOM05D004652 ORTHO05D005634 6.3e-121 438.0 303 69.6
AT4G34090 Arabidopsis thaliana HOM05D004652 ORTHO05D005634 8.3e-121 437.6 304 69.1
Os03g0109700 Oryza sativa ssp. japonica HOM05D004652 ORTHO05D005634 8.3e-121 437.6 305 68.2
CARHR242200 Cardamine hirsuta HOM05D004652 ORTHO05D005634 1.1e-120 437.2 304 68.8
BcaNung03359 Brassica carinata HOM05D004652 ORTHO05D005634 1.8e-120 436.4 303 69.0
Carub.0007s0633 Capsella rubella HOM05D004652 ORTHO05D005634 1.8e-120 436.4 304 67.4
vmacro05311 Vaccinium macrocarpon HOM05D004652 ORTHO05D005634 3.2e-120 435.6 305 68.9
Sp4g02380 Schrenkiella parvula HOM05D004652 ORTHO05D005634 4.1e-120 435.3 303 69.6
AL4G13280 Arabidopsis lyrata HOM05D004652 ORTHO05D005634 5.4e-120 434.9 303 68.6
SGA_v2.0_scaffold34G13618 Striga asiatica HOM05D004652 ORTHO05D005634 1.0e-118 430.6 280 73.6
Ah.01g017900 Amaranthus hybridus HOM05D004652 ORTHO05D005634 1.3e-118 430.3 286 71.7
Aa31LG2G16510 Aethionema arabicum HOM05D002471 ORTHO05D003712 2.5e-117 426.0 321 65.1
ATR0724G029 Amborella trichopoda HOM05D004652 ORTHO05D005634 3.3e-117 425.6 302 66.6
PSO541G5706 Papaver somniferum HOM05D004652 ORTHO05D005634 3.3e-117 425.6 304 67.8
HPP92_024094 Vanilla planifolia HOM05D004652 ORTHO05D005634 6.8e-115 417.9 299 67.6
Prupe.6G231900 Prunus persica HOM05D004652 ORTHO05D005634 1.4e-112 410.2 245 81.2
Oeu049898.1 Olea europaea HOM05D004652 ORTHO05D005634 1.9e-112 409.8 258 74.4
AUR62001905 Chenopodium quinoa HOM05D004652 ORTHO05D005634 3.2e-112 409.1 302 63.9
Rhsim10G0114700 Rhododendron simsii HOM05D004652 ORTHO05D005634 1.6e-111 406.8 265 72.1
Zm00001eb404220 Zea mays HOM05D004652 ORTHO05D005634 1.0e-110 404.1 288 65.6
Aa31LG7G13600 Aethionema arabicum HOM05D004652 ORTHO05D005634 2.5e-109 399.4 345 59.7
BolC7t46455H Brassica oleracea HOM05D004652 ORTHO05D005634 5.8e-106 388.3 306 64.4
BraA03t15329Z Brassica rapa HOM05D004652 ORTHO05D005634 6.4e-105 384.8 306 63.7
AUR62003906 Chenopodium quinoa HOM05D004652 ORTHO05D005634 1.9e-104 383.3 282 63.5
Hund00119 Selenicereus undatus HOM05D004652 ORTHO05D005634 4.1e-104 382.1 305 63.9
C07p60150 Brassica napus HOM05D004652 ORTHO05D005634 2.3e-102 376.3 333 59.5
A03p62590 Brassica napus HOM05D004652 ORTHO05D005634 2.5e-101 372.9 333 58.9
Cpa.g.sc200.27 Carica papaya HOM05D004652 ORTHO05D005634 2.8e-100 369.4 320 60.3
Thhalv10000243m.g Eutrema salsugineum HOM05D004652 ORTHO05D005634 2.3e-99 366.3 314 58.6
SMO367G0761 Selaginella moellendorffii HOM05D004652 ORTHO05D005634 1.5e-98 363.6 301 57.1
Mapoly0032s0004 Marchantia polymorpha HOM05D004652 ORTHO05D005634 3.2e-96 355.9 300 56.3
Pp3c4_13980 Physcomitrium patens HOM05D004652 ORTHO05D005634 1.6e-95 353.6 300 56.3
ClCG02G012270 Citrullus lanatus HOM05D004652 ORTHO05D005634 2.7e-95 352.8 219 76.3
Ca_08994_v3 Cicer arietinum L. HOM05D004652 ORTHO05D005634 4.3e-93 345.5 302 58.9
Pp3c13_18360 Physcomitrium patens HOM05D004652 ORTHO05D005634 3.1e-91 339.3 300 54.7
COL.COLO4_32629 Corchorus olitorius HOM05D004652 ORTHO05D005634 1.4e-88 330.5 304 55.6
EL10Ac6g15724 Beta vulgaris HOM05D004652 ORTHO05D005634 3.5e-87 325.9 235 64.7
CBR_g34458 Chara braunii HOM05D004652 ORTHO05D005634 5.1e-86 322.0 331 51.1
AagrBONN_evm.TU.Sc2ySwM_362.2895 Anthoceros agrestis HOM05D004652 ORTHO05D005634 3.3e-85 319.3 317 50.5
Ah.02g125990 Amaranthus hybridus HOM05D004652 ORTHO05D005634 4.0e-83 312.4 283 54.4
Oeu004436.1 Olea europaea HOM05D004652 ORTHO05D005634 1.0e-78 297.7 318 54.1
Gohir.D13G040700 Gossypium hirsutum HOM05D004652 ORTHO05D005634 4.0e-75 285.8 193 70.5
Eucgr.I01132 Eucalyptus grandis HOM05D004652 ORTHO05D005634 1.2e-74 284.3 192 70.3
FAN26G0096 Fragaria x ananassa HOM05D004652 ORTHO05D005634 8.4e-73 278.1 164 79.9
TAR381G1258 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.5e-63 246.1 162 71.0
SEGI_25477 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 4.5e-58 229.2 162 64.8
SEGI_26044 Sequoiadendron giganteum HOM05D004652 ORTHO05D005634 4.5e-58 229.2 162 64.8
Aqoxy2G01254 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.7e-57 227.3 140 77.1
TAR381G1342 Trochodendron aralioides HOM05D004652 ORTHO05D005634 1.2e-47 194.5 112 83.0
Cre13.g563150 Chlamydomonas reinhardtii HOM05D004652 ORTHO05D005634 3.0e-46 189.9 324 34.6
ECA248G0229 Erigeron canadensis HOM05D004652 ORTHO05D005634 4.1e-43 179.5 126 66.7
Aqoxy4G02413 Aquilegia oxysepala HOM05D004652 ORTHO05D005634 1.4e-38 164.5 112 70.5
PRCOL_00001748 Prasinoderma coloniale HOM05D004652 ORTHO05D005634 8.8e-38 161.8 316 35.1
TAR381G1519 Trochodendron aralioides HOM05D004652 ORTHO05D005634 3.8e-33 146.4 164 50.6
MCO15G669 Micromonas commoda HOM05D004652 ORTHO05D005634 5.5e-32 142.5 307 31.6
Potri.001G304401 Populus trichocarpa HOM05D004652 ORTHO05D005634 8.0e-31 138.7 129 52.7
MCO09G010 Micromonas commoda HOM05D004652 ORTHO05D005634 3.3e-29 133.3 361 31.6
Sabra07G0040900 Salix brachista HOM05D015619 ORTHO05D009044 1.3e-25 121.3 90 66.7
Lalb_Chr09g0323281 Lupinus albus HOM05D004652 ORTHO05D005634 4.7e-23 112.8 171 38.0
Cc00_g07740 Coffea canephora HOM05D004652 ORTHO05D005634 2.0e-21 107.5 279 30.1
CDE01G0594 Ceratophyllum demersum HOM05D000934 ORTHO05D000746 2.0e-18 97.4 105 47.6


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