Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 1.7e-167 593.2 458 100.0
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 4.0e-132 475.7 400 87.8
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 5.4e-129 465.3 399 89.0
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 5.6e-126 455.3 405 83.5
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 1.6e-125 453.8 468 81.4
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 7.5e-123 444.9 406 82.5
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.9e-121 440.3 443 82.2
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 3.2e-121 439.5 460 81.1
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.6e-117 426.0 386 79.3
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 1.4e-113 414.1 405 79.8
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 3.2e-113 412.9 393 79.9
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.6e-112 410.6 402 72.1
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 2.7e-112 409.8 399 78.7
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.1e-110 404.4 403 77.4
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 8.1e-109 398.3 405 79.0
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.4e-108 396.7 412 77.9
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 3.1e-108 396.4 462 70.6
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 4.0e-108 396.0 407 70.8
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 5.2e-108 395.6 403 78.9
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 8.9e-108 394.8 407 78.9
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 8.9e-108 394.8 400 71.0
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 1.2e-107 394.4 470 76.4
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.5e-107 394.0 245 86.9
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.5e-107 394.0 245 86.9
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.5e-107 394.0 405 74.8
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 9.9e-107 391.3 406 80.0
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 2.2e-106 390.2 329 84.5
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 2.9e-106 389.8 470 76.2
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.1e-105 387.9 404 75.7
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 1.1e-105 387.9 408 72.1
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 1.2e-104 384.4 408 76.5
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.3e-103 380.9 407 71.7
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 3.0e-103 379.8 477 74.8
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 5.1e-103 379.0 402 75.6
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.7e-103 378.3 435 65.3
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 3.6e-101 372.9 406 73.4
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 1.1e-100 371.3 443 63.0
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 1.4e-100 370.9 404 72.3
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 1.4e-100 370.9 414 61.6
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 2.0e-99 367.1 400 71.2
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 3.4e-99 366.3 333 84.7
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 3.4e-99 366.3 407 70.5
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 3.4e-99 366.3 441 71.9
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 3.4e-99 366.3 400 75.5
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 4.4e-99 365.9 408 75.0
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 2.2e-98 363.6 403 73.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 4.9e-98 362.5 420 70.2
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 4.9e-98 362.5 411 70.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 3.2e-97 359.8 207 95.2
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 4.2e-97 359.4 409 76.8
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 4.2e-97 359.4 335 76.4
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 2.1e-96 357.1 331 83.7
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 2.7e-96 356.7 399 69.4
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 3.5e-96 356.3 409 72.1
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 1.3e-95 354.4 429 62.9
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.7e-95 354.0 336 76.2
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 6.6e-95 352.1 399 69.7
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 4.0e-92 342.8 284 76.1
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 4.0e-92 342.8 392 69.4
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 2.6e-91 340.1 406 69.7
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 3.8e-90 336.3 404 69.3
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 1.4e-89 334.3 407 66.1
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 1.9e-89 334.0 416 60.6
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 1.2e-88 331.3 455 60.9
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 6.0e-88 328.9 404 67.6
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.3e-87 327.8 404 72.3
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 5.1e-87 325.9 406 72.7
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 1.1e-86 324.7 411 69.3
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 2.8e-85 320.1 404 70.3
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 1.1e-84 318.2 424 61.8
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.4e-84 317.8 399 66.4
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 1.4e-84 317.8 423 61.5
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 1.4e-84 317.8 410 67.6
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.4e-84 317.0 405 58.5
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 2.6e-83 313.5 252 77.4
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.4e-81 307.8 442 61.3
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.6e-80 302.8 240 72.5
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 7.9e-80 302.0 207 82.1
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 1.0e-79 301.6 439 62.4
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 3.9e-79 299.7 328 68.9
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 3.3e-78 296.6 276 60.9
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 7.4e-78 295.4 209 78.9
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.4e-76 291.2 210 78.1
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 3.1e-76 290.0 165 87.3
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 2.0e-75 287.3 165 87.3
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 2.0e-75 287.3 229 72.9
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 6.7e-71 272.3 240 65.8
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 7.4e-70 268.9 160 80.6
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 2.8e-69 266.9 147 89.8
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 1.3e-66 258.1 165 77.0
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 6.5e-66 255.8 167 78.4
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.1e-65 255.0 165 75.2
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.1e-65 255.0 165 75.2
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.1e-65 255.0 165 75.2
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.1e-65 255.0 165 75.2
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 5.5e-65 252.7 165 74.5
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 3.6e-64 250.0 217 68.7
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 6.7e-63 245.7 216 68.1
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 2.0e-59 234.2 165 71.5
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 3.4e-59 233.4 162 72.2
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.4e-57 228.0 370 66.8
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.4e-57 228.0 252 58.3
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 1.2e-56 224.9 164 68.9
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.5e-50 202.6 163 63.2
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 6.5e-50 202.6 163 63.2
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.0e-47 195.3 166 61.4
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 1.0e-47 195.3 166 61.4
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 3.8e-42 176.8 152 63.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.2e-33 146.7 165 51.5
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 6.3e-29 132.9 167 47.3
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 1.7e-26 124.8 166 44.6
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 1.3e-21 108.6 120 49.2
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 7.3e-17 92.8 139 41.0
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 1.4e-15 88.6 62 72.6
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.3e-13 82.0 254 62.6
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 2.7e-11 74.3 112 39.3
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 6.0e-11 73.2 95 46.3
Nitab4.5_0001038g0160 Nicotiana tabacum HOM05D006571 ORTHO05D007771 2.3e-07 61.2 91 63.7
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 3.1e-07 60.8 110 35.5
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 5.2e-07 60.1 82 43.9
Actinidia02775 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-06 58.9 91 44.0
ECA246G1673 Erigeron canadensis HOM05D005498 ORTHO05D006719 7.5e-06 56.2 113 32.7
Thhalv10008494m.g Eutrema salsugineum HOM05D005498 ORTHO05D006719 7.5e-06 56.2 118 32.2
HanXRQChr05g0154501 Helianthus annuus HOM05D005498 ORTHO05D006719 9.8e-06 55.8 113 32.7
HanXRQChr06g0174511 Helianthus annuus HOM05D005498 ORTHO05D006719 9.8e-06 55.8 113 32.7


User provided reference genes

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