Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G030100 Theobroma cacao HOM05D004004 ORTHO05D003284 7.3e-46 187.2 118 100.0
Duzib187G1158 Durio zibethinus HOM05D004004 ORTHO05D003284 2.5e-22 109.0 104 57.7
Dinv40018 Davidia involucrata HOM05D004004 ORTHO05D003284 1.7e-18 96.3 104 51.0
Duzib147G0117 Durio zibethinus HOM05D004004 ORTHO05D003284 1.4e-17 93.2 104 68.3
Ciclev10027136m.g Citrus clementina HOM05D004004 ORTHO05D003284 3.2e-17 92.0 104 49.0
Cpa.g.sc6.165 Carica papaya HOM05D004004 ORTHO05D003284 1.8e-15 86.3 103 49.5
Cfa006895 Carpinus fangiana HOM05D004004 ORTHO05D003284 2.3e-15 85.9 101 47.5
TWI53G0327 Tripterygium wilfordii HOM05D004004 ORTHO05D003284 3.0e-15 85.5 112 64.3
CSS0049012 Camellia sinensis var. sinensis HOM05D004004 ORTHO05D003284 3.9e-15 85.1 109 45.9
Haze_03875 Corylus avellana HOM05D004004 ORTHO05D003284 6.7e-15 84.3 101 44.6
Haze_03857 Corylus avellana HOM05D004004 ORTHO05D003284 1.1e-14 83.6 101 44.6
Glyma.11G071500 Glycine max HOM05D004004 ORTHO05D003284 1.1e-14 83.6 103 62.1
Sopen02g029610 Solanum pennellii HOM05D004004 ORTHO05D003284 1.9e-14 82.8 105 48.6
CiPaw.07G049200 Carya illinoinensis HOM05D004004 ORTHO05D003284 2.5e-14 82.4 106 44.3
Nitab4.5_0003001g0020 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.5e-14 82.4 102 45.1
Gohir.A12G062900 Gossypium hirsutum HOM05D004004 ORTHO05D003284 3.3e-14 82.0 101 62.4
Gorai.008G065800 Gossypium raimondii HOM05D004004 ORTHO05D003284 3.3e-14 82.0 101 62.4
Cfa006894 Carpinus fangiana HOM05D004004 ORTHO05D003284 4.3e-14 81.6 102 54.9
Gohir.D12G062800 Gossypium hirsutum HOM05D004004 ORTHO05D003284 7.4e-14 80.9 101 61.4
Migut.L00026 Erythranthe guttata HOM05D004004 ORTHO05D003284 1.3e-13 80.1 102 42.2
Nitab4.5_0005980g0010 Nicotiana tabacum HOM05D004004 ORTHO05D003284 2.1e-13 79.3 106 43.4
PGSC0003DMG400038828 Solanum tuberosum HOM05D004004 ORTHO05D003284 2.1e-13 79.3 108 43.5
Eucgr.I02406 Eucalyptus grandis HOM05D004004 ORTHO05D003284 2.8e-13 79.0 106 52.8
Peaxi162Scf00418g00071 Petunia axillaris HOM05D004004 ORTHO05D003284 3.7e-13 78.6 113 47.8
Phvul.002G033800 Phaseolus vulgaris HOM05D004004 ORTHO05D003284 6.2e-13 77.8 107 63.6
PGR119G0532 Punica granatum HOM05D004004 ORTHO05D003284 8.1e-13 77.4 103 52.4
QL06p035435 Quercus lobata HOM05D004004 ORTHO05D003284 8.1e-13 77.4 104 53.8
CANSAT01G1672 Cannabis sativa HOM05D004004 ORTHO05D003284 1.1e-12 77.0 109 44.0
Lsat_1_v5_gn_2_77720 Lactuca sativa HOM05D004004 ORTHO05D003284 1.1e-12 77.0 112 46.4
Solyc02g084940.1 Solanum lycopersicum HOM05D004004 ORTHO05D003284 1.1e-12 77.0 105 53.3
Lj4P206T16 Lonicera japonica HOM05D004004 ORTHO05D003284 1.4e-12 76.6 107 59.8
SalBow5G1136 Salvia bowleyana HOM05D004004 ORTHO05D003284 1.8e-12 76.3 101 58.4
FAN28G2460 Fragaria x ananassa HOM05D004004 ORTHO05D003284 2.4e-12 75.9 53 71.7
Lj2g0016762 Lotus japonicus HOM05D004004 ORTHO05D003284 2.4e-12 75.9 115 48.7
MD15G1256400 Malus domestica HOM05D004004 ORTHO05D003284 3.1e-12 75.5 101 53.5
ECA238G4041 Erigeron canadensis HOM05D004004 ORTHO05D003284 5.3e-12 74.7 117 53.8
FAN19G2260 Fragaria x ananassa HOM05D004674 ORTHO05D007261 5.3e-12 74.7 53 69.8
FAN23G2735 Fragaria x ananassa HOM05D004004 ORTHO05D003284 5.3e-12 74.7 53 69.8
COL.COLO4_22030 Corchorus olitorius HOM05D004674 ORTHO05D007261 6.9e-12 74.3 55 67.3
FvH4_1g12761 Fragaria vesca HOM05D004004 ORTHO05D003284 1.2e-11 73.6 53 67.9
MD02G1143000 Malus domestica HOM05D004004 ORTHO05D003284 1.2e-11 73.6 101 40.6
CiPaw.08G139700 Carya illinoinensis HOM05D004004 ORTHO05D003284 2.6e-11 72.4 101 40.6
TPR.G2394 Trifolium pratense HOM05D004004 ORTHO05D003284 2.6e-11 72.4 115 39.1
VMungo1215G3070 Vigna mungo HOM05D004004 ORTHO05D003284 2.6e-11 72.4 114 41.2
Prupe.7G158500 Prunus persica HOM05D004004 ORTHO05D003284 3.4e-11 72.0 44 72.7
RcHm_v2.0_Chr2g0100871 Rosa chinensis HOM05D004004 ORTHO05D003284 3.4e-11 72.0 49 67.3
HanXRQChr14g0440621 Helianthus annuus HOM05D004004 ORTHO05D003284 4.5e-11 71.6 113 45.1
Lsat_1_v5_gn_2_77660 Lactuca sativa HOM05D004004 ORTHO05D003284 1.3e-10 70.1 114 48.2
FAN26G1971 Fragaria x ananassa HOM05D008813 ORTHO05D003284 1.7e-10 69.7 49 69.4
Nn5g29686 Nelumbo nucifera HOM05D004004 ORTHO05D003284 1.7e-10 69.7 101 35.6
Medtr5g020960 Medicago truncatula HOM05D004004 ORTHO05D003284 2.2e-10 69.3 127 48.0
Nn1g04907 Nelumbo nucifera HOM05D004004 ORTHO05D003284 2.2e-10 69.3 103 38.8
Potri.007G021200 Populus trichocarpa HOM05D004004 ORTHO05D003284 2.2e-10 69.3 106 50.0
CAN.G358.44 Capsicum annuum HOM05D004004 ORTHO05D003284 3.8e-10 68.6 111 45.0
Potri.005G120200 Populus trichocarpa HOM05D004004 ORTHO05D003284 3.8e-10 68.6 105 52.4
MBI10_g00769_MAGBIO Magnolia biondii HOM05D004004 ORTHO05D003284 4.9e-10 68.2 102 48.0
Actinidia19203 Actinidia chinensis HOM05D004004 ORTHO05D003284 6.4e-10 67.8 42 71.4
ECA238G0774 Erigeron canadensis HOM05D004004 ORTHO05D003284 8.4e-10 67.4 104 44.2
Sabra07G0018100 Salix brachista HOM05D004004 ORTHO05D003284 8.4e-10 67.4 44 68.2
TAR381G1189 Trochodendron aralioides HOM05D004004 ORTHO05D003284 8.4e-10 67.4 112 39.3
Hund13999 Selenicereus undatus HOM05D004004 ORTHO05D003284 1.1e-09 67.0 48 60.4
Aqoxy6G01170 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 1.4e-09 66.6 119 37.0
HanXRQChr14g0440601 Helianthus annuus HOM05D004004 ORTHO05D003284 5.5e-09 64.7 53 62.3
PSO541G0719 Papaver somniferum HOM05D004004 ORTHO05D003284 5.5e-09 64.7 49 61.2
Manes.01G138700 Manihot esculenta HOM05D004004 ORTHO05D003284 9.3e-09 63.9 105 50.5
DCAR_025966 Daucus carota HOM05D004004 ORTHO05D003284 2.1e-08 62.8 135 35.6
CiPaw.08G139600 Carya illinoinensis HOM05D004004 ORTHO05D003284 6.0e-08 61.2 101 35.6
EL10As8g23910 Beta vulgaris HOM05D004004 ORTHO05D003284 7.9e-08 60.8 45 64.4
Manes.02G097000 Manihot esculenta HOM05D004004 ORTHO05D003284 7.9e-08 60.8 43 65.1
PSO675G0710 Papaver somniferum HOM05D004004 ORTHO05D003284 7.9e-08 60.8 43 65.1
MELO3C007853.2 Cucumis melo HOM05D004004 ORTHO05D003284 1.8e-07 59.7 49 57.1
ClCG01G019820 Citrullus lanatus HOM05D004004 ORTHO05D003284 8.7e-07 57.4 52 50.0
AUR62015036 Chenopodium quinoa HOM05D004004 ORTHO05D003284 1.1e-06 57.0 101 47.5
CsaV3_6G046550 Cucumis sativus L. HOM05D004004 ORTHO05D003284 1.1e-06 57.0 49 55.1
Aqoxy6G01169 Aquilegia oxysepala HOM05D004004 ORTHO05D003284 1.5e-06 56.6 42 59.5
Psat2g157480 Pisum sativum HOM05D010322 ORTHO05D012006 1.9e-06 56.2 51 54.9
Os04g0661100 Oryza sativa ssp. japonica HOM05D004004 ORTHO05D003284 2.5e-06 55.8 42 59.5
Sed0026549 Sechium edule HOM05D004004 ORTHO05D003284 2.5e-06 55.8 49 57.1


User provided reference genes

Program Settings