Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 2.2e-84 315.8 188 100.0
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 4.5e-58 228.4 188 78.7
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 6.1e-55 218.0 189 75.7
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 5.0e-49 198.4 192 69.3
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.9e-48 196.4 192 66.1
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.9e-48 196.4 192 67.2
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 3.1e-46 189.1 177 71.2
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 1.7e-44 183.3 189 56.1
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 2.4e-43 179.5 195 53.3
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 1.0e-41 174.1 186 54.3
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 5.6e-40 168.3 190 52.1
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 1.8e-38 163.3 189 54.5
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 3.1e-38 162.5 116 70.7
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 5.2e-38 161.8 181 53.6
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 1.3e-36 157.1 190 51.1
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 1.3e-36 157.1 114 65.8
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 4.9e-36 155.2 118 66.9
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 1.1e-35 154.1 116 64.7
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 3.2e-35 152.5 192 46.9
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 5.4e-35 151.8 186 48.4
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 1.2e-34 150.6 191 47.6
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 1.6e-34 150.2 188 50.0
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 1.6e-34 150.2 188 50.0
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.6e-34 150.2 113 66.4
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.6e-34 150.2 113 66.4
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 2.1e-34 149.8 188 50.0
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 2.1e-34 149.8 188 50.0
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 2.1e-34 149.8 188 50.0
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 4.6e-34 148.7 188 49.5
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 6.0e-34 148.3 112 65.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 7.8e-34 147.9 184 50.0
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 7.8e-34 147.9 115 66.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 1.7e-33 146.7 114 64.9
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 3.9e-33 145.6 188 48.4
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 5.1e-33 145.2 186 48.9
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 5.1e-33 145.2 117 66.7
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.1e-32 144.1 112 65.2
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 1.1e-32 144.1 186 48.4
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.1e-32 144.1 112 65.2
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.5e-32 143.7 112 65.2
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 1.5e-32 143.7 112 65.2
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 5.6e-32 141.7 119 62.2
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 5.6e-32 141.7 191 55.0
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 5.6e-32 141.7 117 62.4
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 9.5e-32 141.0 116 62.9
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 1.2e-31 140.6 112 63.4
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 1.6e-31 140.2 113 62.8
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 2.1e-31 139.8 107 65.4
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 2.8e-31 139.4 184 47.3
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.8e-31 139.4 110 60.9
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 3.6e-31 139.0 188 47.9
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 3.6e-31 139.0 112 65.2
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 8.1e-31 137.9 113 60.2
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 3.1e-30 136.0 99 65.7
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 6.8e-30 134.8 175 53.7
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 8.9e-30 134.4 111 62.2
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 8.9e-30 134.4 111 62.2
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 1.2e-29 134.0 188 55.9
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 2.0e-29 133.3 114 58.8
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 2.6e-29 132.9 97 69.1
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 2.6e-29 132.9 112 62.5
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 2.6e-29 132.9 111 60.4
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 4.4e-29 132.1 85 74.1
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 5.8e-29 131.7 98 65.3
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 1.3e-28 130.6 98 66.3
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.3e-28 130.6 177 47.5
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 1.7e-28 130.2 95 65.3
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 3.8e-28 129.0 112 58.0
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 4.9e-28 128.6 96 67.7
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 6.4e-28 128.3 177 46.9
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 8.4e-28 127.9 114 58.8
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 1.1e-27 127.5 71 80.3
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 1.1e-27 127.5 114 58.8
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 1.4e-27 127.1 184 49.5
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-27 126.7 71 83.1
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.9e-27 126.7 71 83.1
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.9e-27 126.7 72 80.6
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 3.2e-27 125.9 78 76.9
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 5.4e-27 125.2 109 56.0
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 7.1e-27 124.8 190 44.7
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 7.1e-27 124.8 87 67.8
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 9.2e-27 124.4 188 45.2
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 9.2e-27 124.4 188 45.2
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 1.2e-26 124.0 181 50.3
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 2.1e-26 123.2 106 58.5
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 2.7e-26 122.9 70 78.6
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 3.5e-26 122.5 106 60.4
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 7.8e-26 121.3 71 77.5
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 1.0e-25 120.9 75 74.7
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 1.3e-25 120.6 78 70.5
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 3.6e-23 112.5 171 43.9
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 9.0e-22 107.8 64 81.2
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 9.9e-21 104.4 112 49.1
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 1.3e-20 104.0 72 70.8
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 2.9e-20 102.8 111 47.7
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 2.4e-19 99.8 88 54.5
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 4.2e-19 99.0 66 66.7
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 1.3e-17 94.0 73 60.3
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 3.4e-13 79.3 57 59.6
MCO09G231 Micromonas commoda HOM05D007514 ORTHO05D009469 2.4e-06 56.6 97 30.9


User provided reference genes

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