Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G014600 Theobroma cacao HOM05D005052 ORTHO05D006226 8.7e-257 889.8 453 100.0
COL.COLO4_22462 Corchorus olitorius HOM05D005052 ORTHO05D006226 1.2e-234 816.2 453 91.4
Duzib147G0491 Durio zibethinus HOM05D005052 ORTHO05D006226 3.0e-233 811.6 453 90.7
Gohir.D12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 5.2e-225 784.3 453 87.4
Gohir.A12G058900 Gossypium hirsutum HOM05D005052 ORTHO05D006226 2.6e-224 781.9 453 87.4
Gorai.008G062200 Gossypium raimondii HOM05D005052 ORTHO05D006226 1.1e-222 776.5 454 87.0
Gorai.007G192400 Gossypium raimondii HOM05D005052 ORTHO05D006226 4.5e-221 771.2 453 87.2
Gohir.A11G173500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 8.3e-207 723.8 435 85.3
GSVIVG01018732001 Vitis vinifera HOM05D005052 ORTHO05D006226 2.5e-203 712.2 458 81.0
CiPaw.07G061100 Carya illinoinensis HOM05D005052 ORTHO05D006226 2.1e-202 709.1 462 79.4
Cpa.g.sc6.286 Carica papaya HOM05D005052 ORTHO05D006226 6.2e-202 707.6 458 79.9
TWI53G1960 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 8.9e-201 703.7 428 84.3
Dinv40116 Davidia involucrata HOM05D005052 ORTHO05D006226 3.4e-200 701.8 459 79.1
Atru.chr3.855 Acer truncatum HOM05D005052 ORTHO05D006226 4.4e-200 701.4 451 79.6
CANSAT25G2560 Cannabis sativa HOM05D005052 ORTHO05D006226 4.4e-200 701.4 455 80.0
QL06p051082 Quercus lobata HOM05D005052 ORTHO05D006226 4.1e-198 694.9 458 79.5
CiPaw.08G130500 Carya illinoinensis HOM05D005052 ORTHO05D006226 4.6e-197 691.4 465 77.4
Gohir.D11G180500 Gossypium hirsutum HOM05D005052 ORTHO05D006226 3.0e-196 688.7 378 91.3
Cfa007001 Carpinus fangiana HOM05D005052 ORTHO05D006226 3.9e-196 688.3 460 76.5
Lj2g0011110 Lotus japonicus HOM05D005052 ORTHO05D006226 1.1e-195 686.8 452 78.3
PGR102G0465 Punica granatum HOM05D005052 ORTHO05D006226 1.9e-195 686.0 453 77.9
Prupe.7G171600 Prunus persica HOM05D005052 ORTHO05D006226 7.3e-195 684.1 459 76.9
RcHm_v2.0_Chr2g0099021 Rosa chinensis HOM05D005052 ORTHO05D006226 1.2e-194 683.3 453 77.3
VMungo1215G2918 Vigna mungo HOM05D005052 ORTHO05D006226 2.1e-194 682.6 453 78.1
Cc07_g11060 Coffea canephora HOM05D005052 ORTHO05D006226 3.6e-194 681.8 453 77.5
TWI09G1579 Tripterygium wilfordii HOM05D005052 ORTHO05D006226 3.6e-194 681.8 447 79.6
Eucgr.J02467 Eucalyptus grandis HOM05D005052 ORTHO05D006226 6.2e-194 681.0 460 77.4
Medtr5g022580 Medicago truncatula HOM05D005052 ORTHO05D006226 6.2e-194 681.0 406 83.3
Potri.005G110900 Populus trichocarpa HOM05D005052 ORTHO05D006226 1.8e-193 679.5 453 78.6
arahy.Tifrunner.gnm1.ann1.1KVD1S Arachis hypogaea HOM05D005052 ORTHO05D006226 2.3e-193 679.1 389 86.6
arahy.Tifrunner.gnm1.ann1.PYN71E Arachis hypogaea HOM05D005052 ORTHO05D006226 2.3e-193 679.1 389 86.6
CsaV3_3G000670 Cucumis sativus L. HOM05D005052 ORTHO05D006226 2.3e-193 679.1 454 76.9
Glyma.11G078700 Glycine max HOM05D005052 ORTHO05D006226 4.0e-193 678.3 389 85.9
Nn1g06262 Nelumbo nucifera HOM05D005052 ORTHO05D006226 4.0e-193 678.3 456 77.0
Sabra05G0090900 Salix brachista HOM05D005052 ORTHO05D006226 5.2e-193 677.9 449 78.6
Haze_03731 Corylus avellana HOM05D005052 ORTHO05D006226 6.8e-193 677.6 474 74.1
MELO3C013755.2 Cucumis melo HOM05D005052 ORTHO05D006226 6.8e-193 677.6 454 76.9
Actinidia22954 Actinidia chinensis HOM05D005052 ORTHO05D006226 1.2e-192 676.8 378 88.1
Ca_24920_v3 Cicer arietinum L. HOM05D005052 ORTHO05D006226 1.2e-192 676.8 453 76.8
Nn5g28565 Nelumbo nucifera HOM05D005052 ORTHO05D006226 2.0e-192 676.0 448 77.5
PSO541G6199 Papaver somniferum HOM05D005052 ORTHO05D006226 2.0e-192 676.0 451 78.7
Nitab4.5_0008943g0020 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.6e-192 675.6 417 81.1
vmacro18426 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 5.8e-192 674.5 451 76.5
THA.LOC104821339 Tarenaya hassleriana HOM05D005052 ORTHO05D006226 7.5e-192 674.1 450 76.9
MD15G1242600 Malus domestica HOM05D005052 ORTHO05D006226 9.9e-192 673.7 458 75.5
Sc03g0003700 Simmondsia chinensis HOM05D005052 ORTHO05D006226 1.3e-191 673.3 455 77.6
ClCG10G000590 Citrullus lanatus HOM05D005052 ORTHO05D006226 1.7e-191 672.9 454 76.7
Glyma.01G164300 Glycine max HOM05D005052 ORTHO05D006226 2.2e-191 672.5 389 85.6
Sed0003793 Sechium edule HOM05D005052 ORTHO05D006226 2.2e-191 672.5 452 76.5
Nitab4.5_0001892g0080 Nicotiana tabacum HOM05D005052 ORTHO05D006226 2.9e-191 672.2 417 80.3
PSO675G6089 Papaver somniferum HOM05D005052 ORTHO05D006226 2.9e-191 672.2 454 78.6
Lalb_Chr05g0212261 Lupinus albus HOM05D005052 ORTHO05D006226 6.4e-191 671.0 444 77.3
SalBow3G4284 Salvia bowleyana HOM05D005052 ORTHO05D006226 1.1e-190 670.2 456 77.0
Lalb_Chr09g0321611 Lupinus albus HOM05D005052 ORTHO05D006226 1.9e-190 669.5 452 77.7
Oeu048477.1 Olea europaea HOM05D005052 ORTHO05D006226 3.2e-190 668.7 453 76.2
Rhsim08G0032100 Rhododendron simsii HOM05D005052 ORTHO05D006226 7.1e-190 667.5 378 85.7
Migut.C00533 Erythranthe guttata HOM05D005052 ORTHO05D006226 2.7e-189 665.6 384 85.9
Peaxi162Scf00328g00523 Petunia axillaris HOM05D005052 ORTHO05D006226 3.5e-189 665.2 384 84.4
CAN.G1274.31 Capsicum annuum HOM05D005052 ORTHO05D006226 6.0e-189 664.5 442 75.3
Psat2g153160 Pisum sativum HOM05D005052 ORTHO05D006226 6.0e-189 664.5 457 75.9
TPR.G10542 Trifolium pratense HOM05D005052 ORTHO05D006226 6.0e-189 664.5 393 83.7
FAN28G0876 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.0e-188 663.7 453 75.3
FvH4_1g11430 Fragaria vesca HOM05D005052 ORTHO05D006226 1.3e-188 663.3 453 75.7
AL8G45470 Arabidopsis lyrata HOM05D005052 ORTHO05D006226 3.0e-188 662.1 451 75.4
MBI05_g23388_MAGBIO Magnolia biondii HOM05D005052 ORTHO05D006226 3.0e-188 662.1 450 75.6
Phvul.002G106700 Phaseolus vulgaris HOM05D005052 ORTHO05D006226 3.0e-188 662.1 454 75.1
AT5G66120 Arabidopsis thaliana HOM05D005052 ORTHO05D006226 5.1e-188 661.4 451 75.2
Thhalv10004219m.g Eutrema salsugineum HOM05D005052 ORTHO05D006226 1.1e-187 660.2 452 75.9
FAN19G0738 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.1e-187 660.2 453 75.9
MSTRG.2728 Avicennia marina HOM05D005052 ORTHO05D006226 1.9e-187 659.4 380 85.8
CARHR281630 Cardamine hirsuta HOM05D005052 ORTHO05D006226 2.5e-187 659.1 451 75.8
SGA_v2.0_scaffold94G28549 Striga asiatica HOM05D005052 ORTHO05D006226 2.5e-187 659.1 380 86.3
TAR381G1626 Trochodendron aralioides HOM05D005052 ORTHO05D006226 2.5e-187 659.1 458 75.5
FAN26G3360 Fragaria x ananassa HOM05D005052 ORTHO05D006226 4.3e-187 658.3 466 73.6
Sopen02g028370 Solanum pennellii HOM05D005052 ORTHO05D006226 7.3e-187 657.5 422 78.2
Hund16503 Selenicereus undatus HOM05D005052 ORTHO05D006226 1.2e-186 656.8 453 74.6
FAN23G2381 Fragaria x ananassa HOM05D005052 ORTHO05D006226 1.6e-186 656.4 453 75.3
Solyc02g083590.3 Solanum lycopersicum HOM05D005052 ORTHO05D006226 1.6e-186 656.4 421 77.9
ECA240G3065 Erigeron canadensis HOM05D005052 ORTHO05D006226 2.1e-186 656.0 407 80.3
PGSC0003DMG400003582 Solanum tuberosum HOM05D005052 ORTHO05D006226 4.7e-186 654.8 417 78.4
HanXRQChr13g0424561 Helianthus annuus HOM05D005052 ORTHO05D006226 6.2e-186 654.4 453 74.0
Lj4A222T51 Lonicera japonica HOM05D005052 ORTHO05D006226 6.2e-186 654.4 485 72.6
Sp2g30570 Schrenkiella parvula HOM05D005052 ORTHO05D006226 6.2e-186 654.4 448 75.2
Carub.0008s2837 Capsella rubella HOM05D005052 ORTHO05D006226 3.1e-185 652.1 451 74.7
AUR62029500 Chenopodium quinoa HOM05D005052 ORTHO05D006226 8.9e-185 650.6 461 74.4
AUR62003338 Chenopodium quinoa HOM05D005052 ORTHO05D006226 3.4e-184 648.7 462 74.2
DCAR_022909 Daucus carota HOM05D005052 ORTHO05D006226 4.4e-184 648.3 436 76.6
BcaB04g20124 Brassica carinata HOM05D005052 ORTHO05D006226 7.6e-184 647.5 453 74.6
BcaC04g23113 Brassica carinata HOM05D005052 ORTHO05D006226 7.6e-184 647.5 451 74.9
C09p12030 Brassica napus HOM05D005052 ORTHO05D006226 7.6e-184 647.5 451 74.9
ATR0712G043 Amborella trichopoda HOM05D005052 ORTHO05D006226 9.9e-184 647.1 444 74.1
A09p10150 Brassica napus HOM05D005052 ORTHO05D006226 9.9e-184 647.1 451 74.9
Aa31LG1G14600 Aethionema arabicum HOM05D005052 ORTHO05D006226 1.7e-183 646.4 380 83.2
BolC9t54093H Brassica oleracea HOM05D005052 ORTHO05D006226 1.7e-183 646.4 450 74.9
vmacro22193 Vaccinium macrocarpon HOM05D005052 ORTHO05D006226 6.4e-183 644.4 511 68.5
Aqoxy4G02022 Aquilegia oxysepala HOM05D005052 ORTHO05D006226 4.1e-182 641.7 366 86.3
BraA09t36659Z Brassica rapa HOM05D005052 ORTHO05D006226 1.2e-181 640.2 451 74.3
HPP92_025914 Vanilla planifolia HOM05D005052 ORTHO05D006226 3.5e-181 638.6 385 80.0
HPP92_025909 Vanilla planifolia HOM05D005052 ORTHO05D006226 4.6e-181 638.3 385 80.0
Zm00001eb103800 Zea mays HOM05D005052 ORTHO05D006226 7.8e-181 637.5 389 80.2
Os09g0539100 Oryza sativa ssp. japonica HOM05D005052 ORTHO05D006226 4.3e-179 631.7 384 80.7
Ciclev10025711m.g Citrus clementina HOM05D005052 ORTHO05D006226 1.4e-174 616.7 462 72.7
CSS0012363 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 3.6e-170 602.1 328 90.5
Pp3c13_24150 Physcomitrium patens HOM05D005052 ORTHO05D006226 2.6e-168 595.9 376 75.8
SMO228G0049 Selaginella moellendorffii HOM05D005052 ORTHO05D006226 7.6e-168 594.3 364 78.6
Mapoly0031s0094 Marchantia polymorpha HOM05D005052 ORTHO05D006226 2.7e-165 585.9 386 73.1
AagrBONN_evm.TU.Sc2ySwM_340.387 Anthoceros agrestis HOM05D005052 ORTHO05D006226 4.6e-165 585.1 385 73.2
Zm00001eb331970 Zea mays HOM05D005052 ORTHO05D006226 2.6e-160 569.3 410 72.9
Actinidia28717 Actinidia chinensis HOM05D005052 ORTHO05D006226 8.4e-159 564.3 449 69.0
CBR_g10969 Chara braunii HOM05D005052 ORTHO05D006226 1.3e-154 550.4 419 66.6
DCAR_004732 Daucus carota HOM05D005052 ORTHO05D006226 1.2e-152 543.9 372 72.0
Lsat_1_v5_gn_3_125660 Lactuca sativa HOM05D005052 ORTHO05D006226 1.3e-151 540.4 432 66.2
Actinidia17421 Actinidia chinensis HOM05D005052 ORTHO05D006226 2.5e-147 526.2 287 90.2
Cre08.g368950 Chlamydomonas reinhardtii HOM05D005052 ORTHO05D006226 5.7e-147 525.0 370 69.5
EL10Ac6g15523 Beta vulgaris HOM05D005052 ORTHO05D006226 1.4e-145 520.4 418 65.6
CDE04G1415 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.0e-140 502.7 287 84.7
Manes.02G107200 Manihot esculenta HOM05D005052 ORTHO05D006226 6.7e-140 501.5 339 78.8
MCO01G625 Micromonas commoda HOM05D005052 ORTHO05D006226 7.4e-139 498.0 364 65.4
Hma1.2p1_0315F.1_g122330 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 2.2e-135 486.5 376 69.1
Ah.03g149130 Amaranthus hybridus HOM05D005052 ORTHO05D006226 2.6e-131 473.0 345 73.9
PRCOL_00000314 Prasinoderma coloniale HOM05D005052 ORTHO05D006226 2.4e-129 466.5 378 60.1
SEGI_14262 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 4.5e-120 435.6 280 76.1
Dinv33661 Davidia involucrata HOM05D005052 ORTHO05D006226 1.1e-118 431.0 233 91.0
CDE02G2775 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 6.3e-114 415.2 314 67.5
Hma1.2p1_2620F.1_g325580 Hydrangea macrophylla HOM05D005052 ORTHO05D006226 9.1e-113 411.4 449 54.6
SEGI_08539 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.4e-97 360.9 224 77.2
CDE02G1558 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 1.9e-86 323.9 256 66.8
SGA_v2.0_scaffold273G46395 Striga asiatica HOM05D005052 ORTHO05D006226 1.5e-78 297.7 192 72.9
Lsat_1_v5_gn_0_46241 Lactuca sativa HOM05D005052 ORTHO05D006226 3.3e-78 296.6 299 49.8
TPR.G6592 Trifolium pratense HOM05D005052 ORTHO05D006226 1.2e-75 288.1 273 59.0
RcHm_v2.0_Chr2g0099011 Rosa chinensis HOM05D005052 ORTHO05D006226 5.4e-73 279.3 246 60.6
unitig_699.g19702 Utricularia gibba HOM05D005052 ORTHO05D006226 6.0e-72 275.8 161 85.1
Haze_27270 Corylus avellana HOM05D005052 ORTHO05D006226 1.4e-68 264.6 355 43.4
Dinv33662 Davidia involucrata HOM05D005052 ORTHO05D006226 3.6e-61 240.0 209 66.0
Cfa024476 Carpinus fangiana HOM05D003566 ORTHO05D126353 1.9e-54 217.6 351 41.3
unitig_699.g19703 Utricularia gibba HOM05D005052 ORTHO05D006226 3.8e-50 203.4 199 58.3
Rhsim07G0143100 Rhododendron simsii HOM05D005052 ORTHO05D006226 5.1e-47 193.0 184 60.9
SEGI_40904 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 9.9e-43 178.7 113 77.0
Ah.03g149140 Amaranthus hybridus HOM05D000441 ORTHO05D000340 3.1e-28 130.6 77 80.5
SEGI_17140 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.9e-26 124.0 83 71.1
SEGI_34573 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 2.9e-26 124.0 83 71.1
MD02G1126200 Malus domestica HOM05D005052 ORTHO05D006226 9.4e-25 119.0 129 54.3
MD14G1099300 Malus domestica HOM05D005052 ORTHO05D006226 9.4e-25 119.0 129 54.3
Rhsim07G0135500 Rhododendron simsii HOM05D005052 ORTHO05D006226 3.3e-22 110.5 73 71.2
CDE04G1456 Ceratophyllum demersum HOM05D005052 ORTHO05D006226 3.1e-20 104.0 73 65.8
DCAR_004721 Daucus carota HOM05D005052 ORTHO05D006226 1.2e-19 102.1 113 51.3
SEGI_22853 Sequoiadendron giganteum HOM05D005052 ORTHO05D006226 1.5e-19 101.7 69 68.1
Rhsim07G0135600 Rhododendron simsii HOM05D005052 ORTHO05D339393 5.5e-09 66.6 56 60.7
CSS0040013 Camellia sinensis var. sinensis HOM05D005052 ORTHO05D006226 8.8e-07 59.3 112 42.0


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