Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 7.8e-77 290.4 151 100.0
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 1.3e-55 219.9 151 82.1
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 9.0e-49 197.2 155 74.2
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.2e-47 192.6 151 72.2
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 4.9e-47 191.4 148 72.3
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 6.5e-47 191.0 150 70.7
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.2e-46 188.7 151 71.5
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.3e-44 183.3 148 69.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.0e-44 182.2 149 68.5
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 6.7e-44 181.0 148 68.2
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 6.7e-44 181.0 148 68.2
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 6.7e-44 181.0 152 67.8
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 1.1e-43 180.3 152 68.4
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.3e-43 178.7 151 70.2
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 9.6e-43 177.2 156 64.7
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-41 173.7 151 70.2
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 2.4e-41 172.6 148 65.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 1.2e-40 170.2 149 70.5
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.5e-40 169.9 151 66.2
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.5e-40 169.9 148 64.9
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 1.5e-40 169.9 157 64.3
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 2.0e-40 169.5 149 63.8
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 4.5e-40 168.3 155 61.9
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 7.6e-40 167.5 168 59.5
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.0e-39 167.2 152 63.8
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 1.0e-39 167.2 153 62.1
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 1.0e-39 167.2 148 64.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.7e-39 166.4 127 77.2
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 2.2e-39 166.0 148 64.2
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 6.5e-39 164.5 148 64.2
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.1e-38 163.7 156 62.2
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 9.3e-38 160.6 149 63.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.6e-37 159.8 153 61.4
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.6e-37 159.8 150 61.3
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 2.7e-37 159.1 151 58.9
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 2.7e-37 159.1 154 63.6
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 2.7e-37 159.1 169 59.2
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 3.6e-37 158.7 148 63.5
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 6.1e-37 157.9 148 64.9
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.3e-36 156.8 150 61.3
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 1.8e-36 156.4 154 60.4
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.8e-36 156.4 154 60.4
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.0e-36 155.6 158 59.5
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 3.0e-36 155.6 148 58.8
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 5.1e-36 154.8 149 61.7
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 2.5e-35 152.5 160 56.2
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 2.5e-35 152.5 171 59.6
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 2.5e-35 152.5 134 67.9
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 2.5e-35 152.5 149 61.7
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 3.3e-35 152.1 154 62.3
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 1.3e-34 150.2 151 60.9
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.3e-34 150.2 85 84.7
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 1.6e-34 149.8 149 60.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 6.3e-34 147.9 122 66.4
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.1e-33 147.1 153 58.8
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 2.4e-33 146.0 150 58.0
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 3.1e-33 145.6 96 76.0
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 6.9e-33 144.4 150 62.0
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 9.1e-33 144.1 90 78.9
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 1.2e-32 143.7 157 54.8
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 1.2e-32 143.7 151 59.6
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 1.5e-32 143.3 153 53.6
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 3.4e-32 142.1 154 59.7
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.5e-32 141.7 142 59.9
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 1.0e-31 140.6 148 58.1
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.7e-31 139.8 149 59.1
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.2e-31 139.4 150 59.3
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.8e-31 138.7 118 61.9
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 5.0e-31 138.3 148 54.1
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 6.5e-31 137.9 83 80.7
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 8.5e-31 137.5 85 80.0
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 8.5e-31 137.5 152 55.9
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.1e-30 137.1 86 80.2
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.4e-30 136.7 148 54.7
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 3.2e-30 135.6 138 56.5
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 2.1e-29 132.9 104 68.3
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 2.7e-29 132.5 73 89.0
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 3.6e-29 132.1 135 57.8
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 4.6e-29 131.7 87 75.9
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 7.9e-29 131.0 148 53.4
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 1.0e-28 130.6 150 52.0
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 8.8e-28 127.5 148 52.0
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 1.1e-27 127.1 153 53.6
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 1.1e-27 127.1 148 50.7
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 1.1e-27 127.1 148 51.4
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 2.0e-27 126.3 148 51.4
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 1.3e-26 123.6 151 51.0
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 1.8e-25 119.8 159 46.5
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.8e-25 119.8 151 50.3
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 2.4e-25 119.4 83 67.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 9.1e-25 117.5 154 48.1
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 2.0e-24 116.3 151 49.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 2.6e-24 115.9 153 49.7
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 1.3e-23 113.6 150 46.0
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.7e-23 113.2 151 47.0
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.7e-23 113.2 151 47.0
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 6.5e-23 111.3 152 47.4
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 6.5e-23 111.3 169 42.6
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 1.2e-21 107.1 70 71.4
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.6e-21 106.7 122 51.6
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 4.7e-21 105.1 155 44.5
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 7.9e-21 104.4 63 76.2
QL06p051391 Quercus lobata HOM05D006610 ORTHO05D008447 1.0e-20 104.0 103 61.2
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 1.8e-20 103.2 86 55.8
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 3.0e-20 102.4 146 46.6
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 1.7e-18 96.7 93 51.6
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 2.0e-16 89.7 104 48.1
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 1.5e-14 83.6 45 88.9
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 2.1e-13 79.7 46 82.6
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.2e-11 73.9 42 81.0
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.7e-10 68.9 45 73.3
HPP92_025903 Vanilla planifolia HOM05D006610 ORTHO05D008447 2.9e-07 59.3 38 71.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 5.0e-07 58.5 95 33.7


User provided reference genes

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