Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI81G0911 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.2e-141 506.5 253 100.0
TWI15G0571 Tripterygium wilfordii HOM05D007016 ORTHO05D008847 1.2e-117 426.8 256 87.9
GSVIVG01019642001 Vitis vinifera HOM05D007016 ORTHO05D008847 9.7e-72 274.2 260 58.5
Cfa011932 Carpinus fangiana HOM05D007016 ORTHO05D008847 6.3e-71 271.6 233 63.1
Prupe.5G128800 Prunus persica HOM05D007016 ORTHO05D008847 7.0e-70 268.1 252 60.7
PGR031G1249 Punica granatum HOM05D007016 ORTHO05D008847 5.9e-69 265.0 248 59.3
MD14G1125100 Malus domestica HOM05D007016 ORTHO05D008847 7.7e-69 264.6 255 58.8
Haze_14080 Corylus avellana HOM05D007016 ORTHO05D008847 2.9e-68 262.7 240 61.2
Dinv34693 Davidia involucrata HOM05D007016 ORTHO05D008847 8.5e-68 261.2 253 56.1
Dinv12013 Davidia involucrata HOM05D007016 ORTHO05D008847 1.1e-67 260.8 253 56.5
Duzib084G0025 Durio zibethinus HOM05D000458 ORTHO05D000951 1.6e-66 256.9 211 62.1
Thecc.03G221900 Theobroma cacao HOM05D007016 ORTHO05D008847 1.6e-66 256.9 247 56.3
Duzib205G1809 Durio zibethinus HOM05D007016 ORTHO05D008847 2.1e-66 256.5 253 53.8
MD06G1117700 Malus domestica HOM05D007016 ORTHO05D008847 3.6e-66 255.8 227 61.2
Rhsim02G0251600 Rhododendron simsii HOM05D007016 ORTHO05D008847 3.0e-65 252.7 249 56.2
Actinidia22202 Actinidia chinensis HOM05D007016 ORTHO05D008847 6.7e-65 251.5 241 57.7
Manes.02G003500 Manihot esculenta HOM05D007016 ORTHO05D008847 2.2e-63 246.5 247 55.1
CiPaw.12G078100 Carya illinoinensis HOM05D007016 ORTHO05D008847 6.3e-63 245.0 258 56.2
vmacro11507 Vaccinium macrocarpon HOM05D007016 ORTHO05D008847 8.2e-63 244.6 255 53.7
Ciclev10021806m.g Citrus clementina HOM05D007016 ORTHO05D008847 1.1e-62 244.2 253 53.4
FAN04G1313 Fragaria x ananassa HOM05D007016 ORTHO05D008847 1.4e-62 243.8 218 58.3
TAR375G0929 Trochodendron aralioides HOM05D007016 ORTHO05D008847 1.4e-62 243.8 258 54.3
Eucgr.D01686 Eucalyptus grandis HOM05D007016 ORTHO05D008847 1.8e-62 243.4 220 58.2
Gorai.003G076500 Gossypium raimondii HOM05D007016 ORTHO05D008847 2.4e-62 243.0 247 54.7
FAN08G2008 Fragaria x ananassa HOM05D007016 ORTHO05D008847 5.3e-62 241.9 218 58.3
Glyma.01G230300 Glycine max HOM05D007016 ORTHO05D008847 5.3e-62 241.9 207 62.8
MBI04_g33411_MAGBIO Magnolia biondii HOM05D007016 ORTHO05D008847 5.3e-62 241.9 258 54.3
FvH4_5g11000 Fragaria vesca HOM05D007016 ORTHO05D008847 2.0e-61 240.0 218 57.8
COL.COLO4_10789 Corchorus olitorius HOM05D000458 ORTHO05D000951 2.2e-60 236.5 246 51.6
Ca_24467_v3 Cicer arietinum L. HOM05D007016 ORTHO05D008847 6.5e-60 235.0 207 61.4
Atru.chr9.1899 Acer truncatum HOM05D007016 ORTHO05D008847 2.5e-59 233.0 207 59.4
Nitab4.5_0004251g0050 Nicotiana tabacum HOM05D007016 ORTHO05D008847 3.2e-59 232.6 236 53.4
VMungo1215G3083 Vigna mungo HOM05D007016 ORTHO05D008847 4.2e-59 232.3 207 60.4
Haze_09164 Corylus avellana HOM05D007016 ORTHO05D008847 7.2e-59 231.5 213 61.0
QL02p028324 Quercus lobata HOM05D007016 ORTHO05D008847 1.2e-58 230.7 218 57.8
RcHm_v2.0_Chr7g0186811 Rosa chinensis HOM05D007016 ORTHO05D008847 1.6e-58 230.3 247 52.6
Peaxi162Scf00074g00350 Petunia axillaris HOM05D000458 ORTHO05D000951 6.1e-58 228.4 242 49.6
Potri.003G146100 Populus trichocarpa HOM05D007016 ORTHO05D008847 6.1e-58 228.4 258 51.6
Phvul.002G036800 Phaseolus vulgaris HOM05D007016 ORTHO05D008847 1.0e-57 227.6 206 59.2
CsaV3_5G001730 Cucumis sativus L. HOM05D007016 ORTHO05D008847 8.8e-57 224.6 234 56.0
Sabra03G0106200 Salix brachista HOM05D007016 ORTHO05D008847 1.2e-56 224.2 257 51.4
Oeu022037.1 Olea europaea HOM05D007016 ORTHO05D008847 2.0e-56 223.4 247 52.2
Medtr5g008220 Medicago truncatula HOM05D007016 ORTHO05D008847 4.4e-56 222.2 204 59.3
Haze_09158 Corylus avellana HOM05D007016 ORTHO05D008847 5.7e-56 221.9 213 60.6
arahy.Tifrunner.gnm1.ann1.6JL1AX Arachis hypogaea HOM05D007016 ORTHO05D008847 9.8e-56 221.1 207 58.0
FAN18G1330 Fragaria x ananassa HOM05D007016 ORTHO05D008847 9.8e-56 221.1 256 49.2
arahy.Tifrunner.gnm1.ann1.CXQL6Y Arachis hypogaea HOM05D007016 ORTHO05D008847 2.2e-55 219.9 229 54.1
Nn3g18888 Nelumbo nucifera HOM05D007016 ORTHO05D008847 2.2e-55 219.9 290 46.2
Potri.001G084600 Populus trichocarpa HOM05D007016 ORTHO05D008847 6.3e-55 218.4 210 56.7
Aqoxy5G04260 Aquilegia oxysepala HOM05D007016 ORTHO05D008847 8.3e-55 218.0 215 52.6
Cc08_g16690 Coffea canephora HOM05D007016 ORTHO05D008847 1.4e-54 217.2 217 52.1
HanXRQChr06g0166831 Helianthus annuus HOM05D007016 ORTHO05D008847 1.2e-53 214.2 238 49.6
Gohir.A02G097900 Gossypium hirsutum HOM05D007016 ORTHO05D008847 2.7e-53 213.0 238 50.8
ClCG01G001570 Citrullus lanatus HOM05D007016 ORTHO05D008847 4.5e-53 212.2 240 52.9
AUR62007045 Chenopodium quinoa HOM05D007016 ORTHO05D008847 1.3e-52 210.7 256 53.1
MELO3C005780.2 Cucumis melo HOM05D007016 ORTHO05D008847 1.3e-52 210.7 209 56.0
ATR0620G109 Amborella trichopoda HOM05D007016 ORTHO05D008847 2.3e-52 209.9 175 56.6
Sed0027229 Sechium edule HOM05D007016 ORTHO05D008847 2.3e-52 209.9 239 51.0
SGA_v2.0_scaffold314G48366 Striga asiatica HOM05D007016 ORTHO05D008847 2.3e-52 209.9 217 52.5
Nitab4.5_0007063g0030 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.9e-52 209.5 281 44.8
HPP92_022341 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.1e-51 207.6 193 57.5
HPP92_022355 Vanilla planifolia HOM05D007016 ORTHO05D008847 1.1e-51 207.6 193 57.5
DCAR_006538 Daucus carota HOM05D007016 ORTHO05D008847 1.9e-51 206.8 203 58.6
Migut.O00796 Erythranthe guttata HOM05D007016 ORTHO05D008847 4.2e-51 205.7 230 48.7
LjContig00222g0018079 Lotus japonicus HOM05D007016 ORTHO05D008847 5.5e-51 205.3 244 49.6
ECA246G5308 Erigeron canadensis HOM05D007016 ORTHO05D008847 1.6e-50 203.8 218 51.4
Cpa.g.sc175.19 Carica papaya HOM05D007016 ORTHO05D008847 2.1e-50 203.4 184 59.2
PGSC0003DMG400012122 Solanum tuberosum HOM05D007016 ORTHO05D008847 1.8e-49 200.3 239 48.5
Sc01g0010620 Simmondsia chinensis HOM05D007016 ORTHO05D008847 3.0e-49 199.5 245 48.2
Solyc08g083030.4 Solanum lycopersicum HOM05D007016 ORTHO05D008847 3.0e-49 199.5 239 48.5
Gohir.D03G085700 Gossypium hirsutum HOM05D007016 ORTHO05D008847 6.8e-49 198.4 247 48.6
Lsat_1_v5_gn_3_13941 Lactuca sativa HOM05D007016 ORTHO05D008847 6.8e-49 198.4 250 48.0
Sopen08g031240 Solanum pennellii HOM05D007016 ORTHO05D008847 8.9e-49 198.0 229 48.9
PSO339G2192 Papaver somniferum HOM05D007016 ORTHO05D008847 2.0e-48 196.8 256 47.7
PSO339G4063 Papaver somniferum HOM05D007016 ORTHO05D008847 4.4e-48 195.7 256 48.0
A07p21030 Brassica napus HOM05D003273 ORTHO05D004023 5.7e-48 195.3 183 56.8
BcaC08g44572 Brassica carinata HOM05D003273 ORTHO05D004023 9.8e-48 194.5 181 57.5
FAN13G1076 Fragaria x ananassa HOM05D007016 ORTHO05D008847 9.8e-48 194.5 218 51.4
BcaC02g08900 Brassica carinata HOM05D003273 ORTHO05D004023 1.3e-47 194.1 168 59.5
Thhalv10027936m.g Eutrema salsugineum HOM05D007016 ORTHO05D008847 1.3e-47 194.1 207 54.6
THA.LOC104809306 Tarenaya hassleriana HOM05D007016 ORTHO05D008847 1.3e-47 194.1 211 52.6
TPR.G38026 Trifolium pratense HOM05D007016 ORTHO05D008847 1.7e-47 193.7 180 59.4
BraA07t29790Z Brassica rapa HOM05D003273 ORTHO05D004023 2.8e-47 193.0 185 55.7
Os04g0585600 Oryza sativa ssp. japonica HOM05D007016 ORTHO05D008847 2.8e-47 193.0 208 51.0
BcaB06g27684 Brassica carinata HOM05D003273 ORTHO05D004023 3.7e-47 192.6 182 56.6
SEGI_36842 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 4.9e-47 192.2 158 58.2
AL7G47260 Arabidopsis lyrata HOM05D007016 ORTHO05D008847 8.3e-47 191.4 196 53.6
EL10Ac5g12439 Beta vulgaris HOM05D007016 ORTHO05D008847 1.4e-46 190.7 259 46.7
HanXRQChr17g0534751 Helianthus annuus HOM05D007016 ORTHO05D008847 1.8e-46 190.3 227 49.8
Sp7g00170 Schrenkiella parvula HOM05D007016 ORTHO05D008847 1.8e-46 190.3 193 53.4
C06p20380 Brassica napus HOM05D003273 ORTHO05D004023 2.4e-46 189.9 186 57.0
A04p15110 Brassica napus HOM05D003273 ORTHO05D005100 3.1e-46 189.5 174 58.6
C04p49340 Brassica napus HOM05D003273 ORTHO05D005100 3.1e-46 189.5 176 57.4
BolC4t26521H Brassica oleracea HOM05D003273 ORTHO05D004023 3.1e-46 189.5 176 57.4
BraA04t17152Z Brassica rapa HOM05D003273 ORTHO05D005100 5.4e-46 188.7 174 58.6
Carub.0007s3342 Capsella rubella HOM05D007016 ORTHO05D008847 5.4e-46 188.7 178 55.6
Zm00001eb428160 Zea mays HOM05D007016 ORTHO05D008847 9.2e-46 188.0 220 48.2
CAN.G567.80 Capsicum annuum HOM05D007016 ORTHO05D008847 2.7e-45 186.4 240 49.6
AT5G41960 Arabidopsis thaliana HOM05D007016 ORTHO05D008847 2.9e-44 183.0 176 54.0
Lalb_Chr09g0320381 Lupinus albus HOM05D007016 ORTHO05D008847 6.6e-44 181.8 239 47.3
CARHR212600 Cardamine hirsuta HOM05D007016 ORTHO05D008847 1.1e-43 181.0 203 50.2
Lsat_1_v5_gn_3_14061 Lactuca sativa HOM05D007016 ORTHO05D008847 2.5e-43 179.9 248 45.6
Ah.07g197890 Amaranthus hybridus HOM05D007016 ORTHO05D008847 4.3e-43 179.1 253 45.5
Aa31LG9G230 Aethionema arabicum HOM05D007016 ORTHO05D008847 8.0e-42 174.9 203 47.8
MSTRG.15575 Avicennia marina HOM05D007016 ORTHO05D008847 3.0e-41 172.9 226 45.6
unitig_62.g23644 Utricularia gibba HOM05D007016 ORTHO05D008847 2.9e-39 166.4 203 46.3
MD16G1274000 Malus domestica HOM05D007016 ORTHO05D008847 7.0e-38 161.8 163 53.4
BolC6t37216H Brassica oleracea HOM05D007016 ORTHO05D008847 2.3e-36 156.8 186 48.9
Mapoly0080s0071 Marchantia polymorpha HOM05D007016 ORTHO05D008847 2.5e-35 153.3 175 47.4
AUR62019909 Chenopodium quinoa HOM05D007016 ORTHO05D008847 4.3e-35 152.5 255 45.5
Pp3c14_22240 Physcomitrium patens HOM05D007016 ORTHO05D008847 1.4e-33 147.5 214 43.5
AagrBONN_evm.TU.Sc2ySwM_117.1459 Anthoceros agrestis HOM05D007016 ORTHO05D008847 7.5e-32 141.7 130 53.1
SMO164G0130 Selaginella moellendorffii HOM05D007016 ORTHO05D008847 9.8e-32 141.4 114 57.0
CDE07G1000 Ceratophyllum demersum HOM05D007016 ORTHO05D008847 3.7e-31 139.4 143 49.7
Psat2g187480 Pisum sativum HOM05D007016 ORTHO05D008847 3.2e-30 136.3 92 66.3
Nitab4.5_0000051g0070 Nicotiana tabacum HOM05D007016 ORTHO05D008847 2.3e-28 130.2 122 54.1
CSS0028177 Camellia sinensis var. sinensis HOM05D007016 ORTHO05D008847 3.3e-27 126.3 259 37.8
arahy.Tifrunner.gnm1.ann1.PIY4C5 Arachis hypogaea HOM05D007016 ORTHO05D008847 5.6e-27 125.6 83 71.1
CBR_g26222 Chara braunii HOM05D007016 ORTHO05D008847 2.1e-26 123.6 138 45.7
CANSAT21G1603 Cannabis sativa HOM05D007016 ORTHO05D008847 2.3e-25 120.2 246 38.6
SEGI_07436 Sequoiadendron giganteum HOM05D007016 ORTHO05D008847 5.2e-25 119.0 98 56.1
Hund14199 Selenicereus undatus HOM05D007016 ORTHO05D008847 7.6e-16 88.6 120 49.2
arahy.Tifrunner.gnm1.ann1.HM96ZH Arachis hypogaea HOM05D007016 ORTHO05D008847 9.2e-14 81.6 118 44.1
TPR.G22067 Trifolium pratense HOM05D007016 ORTHO05D008847 1.1e-06 58.2 72 41.7


User provided reference genes

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