Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI81G0293 Tripterygium wilfordii HOM05D002209 ORTHO05D007926 1.7e-140 502.7 253 100.0
Potri.015G041800 Populus trichocarpa HOM05D002209 ORTHO05D007926 8.2e-103 377.5 256 73.0
Manes.14G168500 Manihot esculenta HOM05D002209 ORTHO05D007926 2.4e-102 375.9 253 73.5
Sabra15G0055300 Salix brachista HOM05D002209 ORTHO05D007926 1.5e-101 373.2 256 72.7
Atru.chr9.948 Acer truncatum HOM05D002209 ORTHO05D007926 1.3e-100 370.2 248 75.0
MELO3C002120.2 Cucumis melo HOM05D002209 ORTHO05D007926 3.0e-97 359.0 248 72.2
Ciclev10009263m.g Citrus clementina HOM05D002209 ORTHO05D007926 5.1e-97 358.2 246 71.1
CsaV3_1G007020 Cucumis sativus L. HOM05D002209 ORTHO05D007926 8.7e-97 357.5 248 71.8
Ah.11g045280 Amaranthus hybridus HOM05D002209 ORTHO05D007926 1.9e-96 356.3 246 70.3
PGR083G0394 Punica granatum HOM05D002209 ORTHO05D007926 1.9e-96 356.3 244 72.5
Sabra15G0061600 Salix brachista HOM05D002209 ORTHO05D007926 3.3e-96 355.5 291 63.9
Duzib160G0876 Durio zibethinus HOM05D002209 ORTHO05D007926 4.3e-96 355.1 245 71.0
Thecc.06G020700 Theobroma cacao HOM05D002209 ORTHO05D007926 4.3e-96 355.1 245 69.8
CSS0012934 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 9.7e-96 354.0 255 71.0
CSS0018698 Camellia sinensis var. sinensis HOM05D002209 ORTHO05D007926 9.7e-96 354.0 255 71.0
ClCG04G010780 Citrullus lanatus HOM05D002209 ORTHO05D007926 8.2e-95 350.9 250 70.0
Sc10g0009340 Simmondsia chinensis HOM05D002209 ORTHO05D007926 8.2e-95 350.9 242 69.8
Nitab4.5_0012369g0010 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.1e-94 349.0 251 72.1
THA.LOC104820370 Tarenaya hassleriana HOM05D002209 ORTHO05D007926 1.5e-93 346.7 248 71.8
Gohir.D06G123100 Gossypium hirsutum HOM05D002209 ORTHO05D007926 2.0e-93 346.3 246 69.5
Prupe.5G229800 Prunus persica HOM05D002209 ORTHO05D007926 2.0e-93 346.3 253 68.8
Peaxi162Scf00683g10026 Petunia axillaris HOM05D002209 ORTHO05D007926 3.4e-93 345.5 246 72.4
EL10Ac5g11521 Beta vulgaris HOM05D002209 ORTHO05D007926 4.5e-93 345.1 246 68.7
Gorai.010G143200 Gossypium raimondii HOM05D002209 ORTHO05D007926 4.5e-93 345.1 246 69.1
Cfa019698 Carpinus fangiana HOM05D002209 ORTHO05D007926 2.2e-92 342.8 248 69.0
CARHR093490 Cardamine hirsuta HOM05D002209 ORTHO05D007926 3.8e-92 342.0 247 69.2
Hma1.2p1_1257F.1_g270850 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 3.8e-92 342.0 251 70.9
Phvul.002G327300 Phaseolus vulgaris HOM05D002209 ORTHO05D007926 6.5e-92 341.3 247 68.4
VMungo0251G3506 Vigna mungo HOM05D002209 ORTHO05D007926 6.5e-92 341.3 247 69.2
BcaB04g20790 Brassica carinata HOM05D002209 ORTHO05D007926 1.1e-91 340.5 246 69.1
Gohir.A06G114800 Gossypium hirsutum HOM05D002209 ORTHO05D007926 1.1e-91 340.5 246 69.1
Glyma.05G243600 Glycine max HOM05D002209 ORTHO05D007926 1.4e-91 340.1 248 68.1
Sopen00g010550 Solanum pennellii HOM05D002209 ORTHO05D007926 1.9e-91 339.7 247 71.7
PGSC0003DMG400005659 Solanum tuberosum HOM05D002209 ORTHO05D007926 1.9e-91 339.7 247 71.7
Carub.0003s1789 Capsella rubella HOM05D002209 ORTHO05D007926 2.5e-91 339.3 247 68.8
BcaC09g48772 Brassica carinata HOM05D002209 ORTHO05D007926 3.2e-91 339.0 251 68.5
BolC1t04568H Brassica oleracea HOM05D002209 ORTHO05D007926 3.2e-91 339.0 251 68.5
Sp3g16280 Schrenkiella parvula HOM05D002209 ORTHO05D007926 4.2e-91 338.6 247 69.2
AT3G18165 Arabidopsis thaliana HOM05D002209 ORTHO05D007926 5.5e-91 338.2 247 68.8
BcaC05g28661 Brassica carinata HOM05D002209 ORTHO05D007926 7.2e-91 337.8 247 68.4
BolC5t33504H Brassica oleracea HOM05D002209 ORTHO05D007926 7.2e-91 337.8 247 68.4
MD00G1160500 Malus domestica HOM05D002209 ORTHO05D007926 9.3e-91 337.4 249 68.7
BraA05t21994Z Brassica rapa HOM05D002209 ORTHO05D007926 1.2e-90 337.0 247 68.4
AL3G31340 Arabidopsis lyrata HOM05D002209 ORTHO05D007926 1.6e-90 336.7 247 68.8
A05p31590 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-90 336.7 247 68.4
C01p46070 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-90 336.7 251 67.7
C05p47920 Brassica napus HOM05D002209 ORTHO05D007926 1.6e-90 336.7 247 68.0
TAR622G1089 Trochodendron aralioides HOM05D002209 ORTHO05D007926 2.1e-90 336.3 248 69.4
Thhalv10021375m.g Eutrema salsugineum HOM05D002209 ORTHO05D007926 2.7e-90 335.9 251 67.7
Sed0021446 Sechium edule HOM05D002209 ORTHO05D007926 2.7e-90 335.9 249 67.9
A01p36240 Brassica napus HOM05D002209 ORTHO05D007926 3.6e-90 335.5 247 68.4
BraA01t03699Z Brassica rapa HOM05D002209 ORTHO05D007926 3.6e-90 335.5 247 68.4
Nitab4.5_0000150g0080 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.6e-90 335.5 242 69.8
Glyma.08G051400 Glycine max HOM05D002209 ORTHO05D007926 4.6e-90 335.1 246 68.3
Migut.L01913 Erythranthe guttata HOM05D002209 ORTHO05D007926 1.3e-89 333.6 249 67.1
Medtr8g106740 Medicago truncatula HOM05D002209 ORTHO05D007926 3.9e-89 332.0 242 68.2
Rhsim12G0139900 Rhododendron simsii HOM05D002209 ORTHO05D007926 6.7e-89 331.3 245 69.0
Eucgr.B00853 Eucalyptus grandis HOM05D002209 ORTHO05D007926 1.1e-88 330.5 246 65.0
SGA_v2.0_scaffold21G09613 Striga asiatica HOM05D002209 ORTHO05D007926 1.1e-88 330.5 250 68.8
QL10p027511 Quercus lobata HOM05D002209 ORTHO05D007926 1.5e-88 330.1 250 66.4
CANSAT80G1708 Cannabis sativa HOM05D002209 ORTHO05D007926 2.5e-88 329.3 244 68.9
CANSAT80G2078 Cannabis sativa HOM05D002209 ORTHO05D007926 2.5e-88 329.3 244 68.9
Lj4g0023570 Lotus japonicus HOM05D002209 ORTHO05D007926 3.3e-88 328.9 242 69.4
Nitab4.5_0001158g0030 Nicotiana tabacum HOM05D002209 ORTHO05D007926 3.3e-88 328.9 236 72.9
CAN.G1129.32 Capsicum annuum HOM05D002209 ORTHO05D007926 5.7e-88 328.2 251 68.5
ECA240G0871 Erigeron canadensis HOM05D002209 ORTHO05D007926 7.4e-88 327.8 250 66.4
Lsat_1_v5_gn_3_114081 Lactuca sativa HOM05D002209 ORTHO05D007926 7.4e-88 327.8 249 68.3
Lalb_Chr09g0330531 Lupinus albus HOM05D002209 ORTHO05D007926 1.6e-87 326.6 252 63.9
Actinidia18911 Actinidia chinensis HOM05D002209 ORTHO05D007926 2.2e-87 326.2 235 69.8
CiPaw.15G139100 Carya illinoinensis HOM05D002209 ORTHO05D007926 2.2e-87 326.2 246 67.5
PSO017G1461 Papaver somniferum HOM05D002209 ORTHO05D007926 3.7e-87 325.5 246 67.1
TPR.G12761 Trifolium pratense HOM05D002209 ORTHO05D007926 1.1e-86 323.9 246 65.4
SalBow5G1692 Salvia bowleyana HOM05D002209 ORTHO05D007926 1.8e-86 323.2 241 68.9
Aa31LG8G4990 Aethionema arabicum HOM05D002209 ORTHO05D004761 3.1e-86 322.4 237 69.6
MSTRG.22939 Avicennia marina HOM05D002209 ORTHO05D007926 4.1e-86 322.0 250 67.6
PSO478G0876 Papaver somniferum HOM05D002209 ORTHO05D007926 4.1e-86 322.0 244 66.8
Solyc03g119010.3 Solanum lycopersicum HOM05D002209 ORTHO05D007926 4.1e-86 322.0 237 71.7
Actinidia35109 Actinidia chinensis HOM05D002209 ORTHO05D007926 5.3e-86 321.6 235 68.5
AUR62033751 Chenopodium quinoa HOM05D002209 ORTHO05D007926 5.3e-86 321.6 251 65.3
arahy.Tifrunner.gnm1.ann1.IWL1UH Arachis hypogaea HOM05D002209 ORTHO05D007926 9.1e-86 320.9 246 66.3
arahy.Tifrunner.gnm1.ann1.A2QZNW Arachis hypogaea HOM05D002209 ORTHO05D007926 2.6e-85 319.3 248 65.7
arahy.Tifrunner.gnm1.ann1.X5TZ4V Arachis hypogaea HOM05D002209 ORTHO05D007926 2.6e-85 319.3 248 65.3
arahy.Tifrunner.gnm1.ann1.7LX2IS Arachis hypogaea HOM05D002209 ORTHO05D007926 5.9e-85 318.2 246 65.4
MD14G1233600 Malus domestica HOM05D002209 ORTHO05D007926 2.9e-84 315.8 234 68.8
Aqoxy3G00431 Aquilegia oxysepala HOM05D002209 ORTHO05D007926 1.4e-83 313.5 251 63.7
Hund02335 Selenicereus undatus HOM05D002209 ORTHO05D007926 3.6e-82 308.9 251 62.9
CDE08G0043 Ceratophyllum demersum HOM05D002209 ORTHO05D007926 6.7e-81 304.7 235 64.7
MBI13_g00575_MAGBIO Magnolia biondii HOM05D002209 ORTHO05D007926 1.5e-80 303.5 245 63.7
HanXRQChr03g0090991 Helianthus annuus HOM05D002209 ORTHO05D007926 1.3e-79 300.4 232 67.7
Lalb_Chr16g0387151 Lupinus albus HOM05D002209 ORTHO05D007926 1.3e-79 300.4 222 67.1
unitig_27.g24963 Utricularia gibba HOM05D002209 ORTHO05D007926 1.3e-79 300.4 242 64.5
HPP92_026682 Vanilla planifolia HOM05D002209 ORTHO05D007926 2.4e-78 296.2 235 65.5
GSVIVG01008385001 Vitis vinifera HOM05D002209 ORTHO05D007926 1.3e-76 290.4 195 72.8
RcHm_v2.0_Chr7g0178821 Rosa chinensis HOM05D002209 ORTHO05D007926 2.9e-76 289.3 243 63.0
Nn2g14536 Nelumbo nucifera HOM05D002209 ORTHO05D007926 4.2e-75 285.4 241 61.0
FAN13G0553 Fragaria x ananassa HOM05D002209 ORTHO05D007926 1.6e-74 283.5 249 63.5
Ca_14628_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 2.1e-74 283.1 245 61.6
FvH4_5g17030 Fragaria vesca HOM05D002209 ORTHO05D007926 2.1e-74 283.1 249 63.9
FAN08G0602 Fragaria x ananassa HOM05D002209 ORTHO05D007926 7.9e-74 281.2 245 62.9
Zm00001eb128260 Zea mays HOM05D002209 ORTHO05D007926 5.2e-73 278.5 246 57.7
DCAR_011381 Daucus carota HOM05D002209 ORTHO05D007926 8.8e-73 277.7 241 58.9
FAN18G2854 Fragaria x ananassa HOM05D002209 ORTHO05D007926 2.0e-72 276.6 240 63.3
Cc04_g06640 Coffea canephora HOM05D002209 ORTHO05D007926 2.8e-71 272.7 194 71.6
vmacro16426 Vaccinium macrocarpon HOM05D002209 ORTHO05D007926 1.8e-70 270.0 318 50.6
COL.COLO4_07530 Corchorus olitorius HOM05D002209 ORTHO05D007926 1.2e-69 267.3 188 70.2
ATR0068G069 Amborella trichopoda HOM05D002209 ORTHO05D007926 2.2e-68 263.1 238 55.9
Ca_17220_v3 Cicer arietinum L. HOM05D002209 ORTHO05D004761 6.1e-66 255.0 245 58.0
Lj9A422G65 Lonicera japonica HOM05D002209 ORTHO05D007926 1.0e-65 254.2 205 67.8
Mapoly0110s0002 Marchantia polymorpha HOM05D002209 ORTHO05D007926 2.6e-64 249.6 239 53.1
Pp3c9_17380 Physcomitrium patens HOM05D002209 ORTHO05D007926 3.7e-63 245.7 237 53.2
AagrBONN_evm.TU.Sc2ySwM_344.2039 Anthoceros agrestis HOM05D002209 ORTHO05D007926 7.7e-61 238.0 231 52.4
Dinv13547 Davidia involucrata HOM05D002209 ORTHO05D007926 1.7e-60 236.9 255 52.9
AUR62029954 Chenopodium quinoa HOM05D002209 ORTHO05D007926 2.2e-60 236.5 187 64.7
Oeu014368.1 Olea europaea HOM05D002209 ORTHO05D007926 4.0e-57 225.7 163 68.1
Haze_18790 Corylus avellana HOM05D002209 ORTHO05D004761 1.9e-51 206.8 137 75.2
SMO339G0064 Selaginella moellendorffii HOM05D002209 ORTHO05D007926 5.2e-49 198.7 238 43.7
CBR_g46893 Chara braunii HOM05D006221 ORTHO05D007759 7.5e-48 194.9 221 48.4
HPP92_018005 Vanilla planifolia HOM05D002209 ORTHO05D007926 3.7e-47 192.6 182 55.5
Hma1.2p1_1257F.1_g270860 Hydrangea macrophylla HOM05D002209 ORTHO05D007926 4.5e-45 185.7 139 71.9
Psat7g003920 Pisum sativum HOM05D002209 ORTHO05D007926 4.3e-43 179.1 140 62.9
SEGI_33728 Sequoiadendron giganteum HOM05D002209 ORTHO05D007926 2.7e-37 159.8 131 62.6
Cre17.g697350 Chlamydomonas reinhardtii HOM05D002209 ORTHO05D007926 7.8e-29 131.7 203 36.5
MCO11G869 Micromonas commoda HOM05D002209 ORTHO05D007926 1.3e-28 131.0 225 34.7
Psat7g003960 Pisum sativum HOM05D002209 ORTHO05D007926 2.6e-24 116.7 79 73.4
C05p44850 Brassica napus HOM05D002209 ORTHO05D007926 5.8e-24 115.5 79 70.9
BolC5t33212H Brassica oleracea HOM05D002209 ORTHO05D007926 5.8e-24 115.5 79 70.9
Ca_17308_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.3e-23 114.4 84 70.2
AUR62029953 Chenopodium quinoa HOM05D002209 ORTHO05D007926 4.1e-22 109.4 81 64.2
Ca_29797_v3 Cicer arietinum L. HOM05D002209 ORTHO05D007926 1.9e-14 84.0 64 70.3
A10p11050 Brassica napus HOM05D002209 ORTHO05D033214 4.6e-13 79.3 58 60.3
BraA10t43197Z Brassica rapa HOM05D002209 ORTHO05D033214 2.9e-07 60.1 47 57.4
BolC6t38528H Brassica oleracea HOM05D002209 ORTHO05D033214 3.8e-07 59.7 46 56.5


User provided reference genes

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