Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI81G0123 Tripterygium wilfordii HOM05D006567 ORTHO05D009430 3.0e-218 761.5 375 100.0
TAR636G1533 Trochodendron aralioides HOM05D006567 ORTHO05D009430 3.0e-186 655.2 366 85.8
CSS0024870 Camellia sinensis var. sinensis HOM05D006567 ORTHO05D009430 1.1e-185 653.3 363 86.8
COL.COLO4_37145 Corchorus olitorius HOM05D006567 ORTHO05D009430 1.1e-185 653.3 363 86.5
Glyma.05G061300 Glycine max HOM05D006567 ORTHO05D009430 1.1e-185 653.3 366 85.5
Potri.003G078500 Populus trichocarpa HOM05D006567 ORTHO05D009430 4.3e-185 651.4 373 83.6
Duzib084G0744 Durio zibethinus HOM05D006567 ORTHO05D009430 7.4e-185 650.6 368 84.8
Sabra03G0048700 Salix brachista HOM05D006567 ORTHO05D009430 1.6e-184 649.4 372 82.8
Atru.chr9.1289 Acer truncatum HOM05D006567 ORTHO05D009430 3.7e-184 648.3 363 85.7
Lj4g0021343 Lotus japonicus HOM05D006567 ORTHO05D009430 3.7e-184 648.3 372 84.4
arahy.Tifrunner.gnm1.ann1.69E4XE Arachis hypogaea HOM05D006567 ORTHO05D009430 8.2e-184 647.1 365 85.2
QL12p011664 Quercus lobata HOM05D006567 ORTHO05D009430 8.2e-184 647.1 364 86.5
arahy.Tifrunner.gnm1.ann1.E0WBQ7 Arachis hypogaea HOM05D006567 ORTHO05D009430 2.4e-183 645.6 365 84.9
Cc08_g12240 Coffea canephora HOM05D006567 ORTHO05D009430 6.9e-183 644.0 371 82.7
VMungo0251G1330 Vigna mungo HOM05D006567 ORTHO05D009430 9.0e-183 643.7 364 84.1
Thecc.03G249000 Theobroma cacao HOM05D006567 ORTHO05D009430 1.2e-182 643.3 361 86.1
Actinidia14413 Actinidia chinensis HOM05D006567 ORTHO05D009430 1.5e-182 642.9 365 84.4
MSTRG.12113 Avicennia marina HOM05D006567 ORTHO05D009430 2.6e-182 642.1 364 84.3
Gohir.D12G218600 Gossypium hirsutum HOM05D006567 ORTHO05D009430 4.5e-182 641.3 363 84.6
Gorai.008G234200 Gossypium raimondii HOM05D006567 ORTHO05D009430 4.5e-182 641.3 363 84.8
Cfa015824 Carpinus fangiana HOM05D006567 ORTHO05D009430 5.9e-182 641.0 365 84.9
vmacro00188 Vaccinium macrocarpon HOM05D006567 ORTHO05D009430 5.9e-182 641.0 365 83.6
CANSAT21G0369 Cannabis sativa HOM05D006567 ORTHO05D009430 7.7e-182 640.6 366 83.6
TPR.G37608 Trifolium pratense HOM05D006567 ORTHO05D009430 1.3e-181 639.8 370 83.2
Cpa.g.sc29.179 Carica papaya HOM05D006567 ORTHO05D009430 5.0e-181 637.9 366 83.6
Medtr4g100760 Medicago truncatula HOM05D006567 ORTHO05D009430 5.0e-181 637.9 363 84.6
Lalb_Chr05g0221201 Lupinus albus HOM05D006567 ORTHO05D009430 1.1e-180 636.7 363 84.0
Ca_21975_v3 Cicer arietinum L. HOM05D006567 ORTHO05D009430 2.5e-180 635.6 363 85.7
Gohir.A12G216000 Gossypium hirsutum HOM05D006567 ORTHO05D009430 2.5e-180 635.6 369 83.2
Peaxi162Scf00209g00122 Petunia axillaris HOM05D006567 ORTHO05D009430 7.2e-180 634.0 365 82.7
MD04G1062400 Malus domestica HOM05D006567 ORTHO05D009430 9.4e-180 633.6 362 85.1
RcHm_v2.0_Chr7g0203711 Rosa chinensis HOM05D006567 ORTHO05D009430 9.4e-180 633.6 363 84.0
Aqoxy7G00822 Aquilegia oxysepala HOM05D006567 ORTHO05D009430 1.2e-179 633.3 363 83.7
Ciclev10020637m.g Citrus clementina HOM05D006567 ORTHO05D009430 1.6e-179 632.9 372 81.5
PGR031G0713 Punica granatum HOM05D006567 ORTHO05D009430 4.6e-179 631.3 369 82.1
Hund11604 Selenicereus undatus HOM05D006567 ORTHO05D009430 4.6e-179 631.3 364 81.6
Phvul.003G221900 Phaseolus vulgaris HOM05D006567 ORTHO05D009430 7.9e-179 630.6 367 82.3
MBI04_g09522_MAGBIO Magnolia biondii HOM05D006567 ORTHO05D009430 1.4e-178 629.8 364 82.4
Eucgr.D02095 Eucalyptus grandis HOM05D006567 ORTHO05D009430 3.0e-178 628.6 363 84.3
PGSC0003DMG400004822 Solanum tuberosum HOM05D006567 ORTHO05D009430 3.9e-178 628.2 365 81.6
Psat4g072680 Pisum sativum HOM05D006567 ORTHO05D009430 5.1e-178 627.9 369 82.1
Solyc08g078460.3 Solanum lycopersicum HOM05D006567 ORTHO05D009430 5.1e-178 627.9 365 81.9
SalBow6G6157 Salvia bowleyana HOM05D006567 ORTHO05D009430 2.5e-177 625.5 361 81.7
FAN18G0654 Fragaria x ananassa HOM05D006567 ORTHO05D009430 3.3e-177 625.2 371 80.3
Sopen08g026950 Solanum pennellii HOM05D006567 ORTHO05D009430 3.3e-177 625.2 365 81.4
DCAR_004966 Daucus carota HOM05D006567 ORTHO05D009430 4.3e-177 624.8 365 80.5
Nn1g00949 Nelumbo nucifera HOM05D006567 ORTHO05D009430 7.4e-177 624.0 364 82.1
FAN08G1209 Fragaria x ananassa HOM05D006567 ORTHO05D009430 9.7e-177 623.6 370 80.5
Migut.A01121 Erythranthe guttata HOM05D006567 ORTHO05D009430 1.3e-176 623.2 365 82.2
FAN04G2727 Fragaria x ananassa HOM05D006567 ORTHO05D009430 2.8e-176 622.1 371 80.3
CAN.G1178.26 Capsicum annuum HOM05D006567 ORTHO05D009430 3.7e-176 621.7 364 81.0
HanXRQChr13g0417851 Helianthus annuus HOM05D006567 ORTHO05D009430 3.7e-176 621.7 363 79.6
MELO3C005521.2 Cucumis melo HOM05D006567 ORTHO05D009430 6.3e-176 620.9 364 81.3
CsaV3_5G004320 Cucumis sativus L. HOM05D006567 ORTHO05D009430 3.1e-175 618.6 364 81.3
EL10Ac5g12369 Beta vulgaris HOM05D006567 ORTHO05D009430 2.6e-174 615.5 368 80.4
Ah.12g054200 Amaranthus hybridus HOM05D006567 ORTHO05D006679 7.7e-174 614.0 365 79.7
EL10Ac5g12374 Beta vulgaris HOM05D006567 ORTHO05D009430 1.7e-173 612.8 361 81.7
Nitab4.5_0001381g0120 Nicotiana tabacum HOM05D006567 ORTHO05D009430 2.9e-173 612.1 368 80.7
Lsat_1_v5_gn_6_92541 Lactuca sativa HOM05D006567 ORTHO05D009430 6.5e-173 610.9 362 79.0
ECA240G4587 Erigeron canadensis HOM05D006567 ORTHO05D009430 1.4e-172 609.8 361 78.7
Haze_00669 Corylus avellana HOM05D006567 ORTHO05D009430 1.2e-171 606.7 396 77.0
AUR62019967 Chenopodium quinoa HOM05D006567 ORTHO05D009430 8.8e-170 600.5 352 80.7
ClCG01G004160 Citrullus lanatus HOM05D006567 ORTHO05D009430 3.3e-169 598.6 374 77.8
THA.LOC104806666 Tarenaya hassleriana HOM05D006567 ORTHO05D009430 7.4e-169 597.4 371 78.2
PSO170G1323 Papaver somniferum HOM05D006567 ORTHO05D009430 9.7e-169 597.0 388 75.0
CARHR223980 Cardamine hirsuta HOM05D006567 ORTHO05D009430 1.3e-168 596.7 365 78.1
SGA_v2.0_scaffold26G11306 Striga asiatica HOM05D006567 ORTHO05D009430 6.3e-168 594.3 376 76.6
Nitab4.5_0002289g0070 Nicotiana tabacum HOM05D006567 ORTHO05D009430 1.4e-167 593.2 365 79.5
PSO017G4082 Papaver somniferum HOM05D006567 ORTHO05D009430 4.1e-167 591.7 380 76.1
Carub.0007s2404 Capsella rubella HOM05D006567 ORTHO05D009430 1.5e-166 589.7 365 77.5
Thhalv10025513m.g Eutrema salsugineum HOM05D006567 ORTHO05D009430 2.0e-166 589.3 365 77.0
AT4G17370 Arabidopsis thaliana HOM05D006567 ORTHO05D009430 4.5e-166 588.2 365 77.5
Sp7g16810 Schrenkiella parvula HOM05D006567 ORTHO05D009430 1.9e-164 582.8 365 76.7
AL7G37340 Arabidopsis lyrata HOM05D006567 ORTHO05D009430 4.2e-164 581.6 385 74.5
ATR0057G105 Amborella trichopoda HOM05D006567 ORTHO05D009430 5.5e-164 581.3 363 74.9
BcaNung03466 Brassica carinata HOM05D006567 ORTHO05D009430 9.4e-164 580.5 365 76.7
BraA03t14129Z Brassica rapa HOM05D006567 ORTHO05D009430 2.3e-162 575.9 363 76.3
Aa31LG1G23140 Aethionema arabicum HOM05D006567 ORTHO05D009430 3.0e-162 575.5 359 76.9
A03p50390 Brassica napus HOM05D006567 ORTHO05D009430 8.8e-162 573.9 368 74.7
BolC7t45378H Brassica oleracea HOM05D006567 ORTHO05D009430 2.0e-161 572.8 365 75.6
HPP92_025881 Vanilla planifolia HOM05D006567 ORTHO05D009430 1.7e-160 569.7 365 75.9
SEGI_34288 Sequoiadendron giganteum HOM05D006567 ORTHO05D009430 9.4e-156 553.9 364 72.5
AUR62007104 Chenopodium quinoa HOM05D006567 ORTHO05D009430 1.2e-153 547.0 352 75.3
unitig_899.g15594 Utricularia gibba HOM05D006567 ORTHO05D009430 5.7e-153 544.7 370 71.4
CiPaw.11G081200 Carya illinoinensis HOM05D006567 ORTHO05D009430 5.0e-149 531.6 301 86.4
Os08g0148267 Oryza sativa ssp. japonica HOM05D006567 ORTHO05D009430 3.6e-147 525.4 303 83.2
Manes.01G082300 Manihot esculenta HOM05D006567 ORTHO05D009430 6.8e-146 521.2 285 88.4
Dinv39160 Davidia involucrata HOM05D006567 ORTHO05D009430 2.2e-144 516.2 286 86.4
AagrBONN_evm.TU.Sc2ySwM_228.3639 Anthoceros agrestis HOM05D006567 ORTHO05D009430 1.1e-140 503.8 367 64.6
Pp3c4_15440 Physcomitrium patens HOM05D006567 ORTHO05D009430 4.4e-137 491.9 371 65.0
Mapoly0040s0044 Marchantia polymorpha HOM05D006567 ORTHO05D009430 1.3e-136 490.3 375 64.0
Prupe.5G066000 Prunus persica HOM05D006567 ORTHO05D009430 6.3e-136 488.0 268 85.8
SMO228G0171 Selaginella moellendorffii HOM05D006567 ORTHO05D009430 1.6e-134 483.4 363 63.9
Sed0022818 Sechium edule HOM05D006567 ORTHO05D009430 1.8e-130 469.9 267 83.9
Zm00001eb416490 Zea mays HOM05D006567 ORTHO05D009430 1.3e-128 463.8 306 74.2
Lj2C221T14 Lonicera japonica HOM05D006567 ORTHO05D009430 1.6e-115 420.2 243 84.0
Rhsim09G0000200 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.3e-112 410.6 346 61.0
GSVIVG01004725001 Vitis vinifera HOM05D006567 ORTHO05D009430 4.9e-112 408.7 227 87.2
FvH4_5g19170 Fragaria vesca HOM05D006567 ORTHO05D009430 1.6e-107 393.7 222 81.5
Sc07g0009260 Simmondsia chinensis HOM05D006567 ORTHO05D009430 2.1e-107 393.3 223 82.5
Glyma.17G143100 Glycine max HOM05D006567 ORTHO05D009430 8.4e-80 301.6 180 78.9
BcaC06g33541 Brassica carinata HOM05D006567 ORTHO05D009430 4.8e-67 259.2 212 63.2
QL08p052096 Quercus lobata HOM05D006567 ORTHO05D015939 2.4e-50 203.8 113 83.2
QL08p055973 Quercus lobata HOM05D006567 ORTHO05D015939 4.5e-49 199.5 124 75.0
FvH4_5g07380 Fragaria vesca HOM05D006567 ORTHO05D015939 4.2e-47 193.0 121 72.7
FvH4_3g36620 Fragaria vesca HOM05D006567 ORTHO05D015939 5.2e-45 186.0 124 71.8
FAN04G0922 Fragaria x ananassa HOM05D006567 ORTHO05D015939 4.4e-44 183.0 124 69.4
FAN09G0929 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-43 181.4 123 69.1
FAN22G0783 Fragaria x ananassa HOM05D006567 ORTHO05D015939 1.3e-43 181.4 123 69.1
FAN27G0484 Fragaria x ananassa HOM05D006567 ORTHO05D015939 9.1e-42 175.3 124 67.7
Rhsim09G0000100 Rhododendron simsii HOM05D006567 ORTHO05D009430 1.6e-33 147.9 97 74.2
BcaC06g33542 Brassica carinata HOM05D006567 ORTHO05D015939 5.5e-31 139.4 93 69.9
FAN28G1973 Fragaria x ananassa HOM05D006567 ORTHO05D015939 3.5e-17 93.6 57 68.4
TPR.G40300 Trifolium pratense HOM05D006567 ORTHO05D412752 3.1e-13 80.5 54 72.2
Pp3s96_60 Physcomitrium patens HOM05D016182 ORTHO05D028865 4.0e-13 80.1 313 25.2
TPR.G24425 Trifolium pratense HOM05D006567 ORTHO05D411483 5.2e-13 79.7 54 70.4
TPR.G2696 Trifolium pratense HOM05D006567 ORTHO05D411767 5.2e-13 79.7 54 72.2
TPR.G2679 Trifolium pratense HOM05D006567 ORTHO05D412848 1.7e-11 74.7 54 68.5
AL7G37260 Arabidopsis lyrata HOM05D006567 ORTHO05D015939 9.2e-10 68.9 43 69.8
EL10Ac4g09527 Beta vulgaris HOM05D006567 ORTHO05D010541 3.3e-07 60.5 34 82.4
Ca_29050_v3 Cicer arietinum L. HOM05D006567 ORTHO05D018939 4.7e-06 56.6 210 24.8


User provided reference genes

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