Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G1707 Tripterygium wilfordii HOM05D003739 ORTHO05D003996 0.0e+00 1236.5 691 100.0
GSVIVG01023816001 Vitis vinifera HOM05D003739 ORTHO05D003996 3.2e-109 400.2 772 38.9
QL11p044151 Quercus lobata HOM05D003739 ORTHO05D003996 1.9e-101 374.4 784 40.6
Cfa005045 Carpinus fangiana HOM05D003739 ORTHO05D003996 5.1e-99 366.3 753 38.6
Ciclev10027900m.g Citrus clementina HOM05D003739 ORTHO05D003996 4.3e-98 363.2 753 37.2
CiPaw.06G133400 Carya illinoinensis HOM05D003739 ORTHO05D003996 4.1e-96 356.7 802 37.3
CiPaw.10G121500 Carya illinoinensis HOM05D003739 ORTHO05D003996 1.1e-93 348.6 747 36.8
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 2.5e-93 347.4 785 37.1
CSS0038123 Camellia sinensis var. sinensis HOM05D003739 ORTHO05D003996 3.6e-92 343.6 766 37.1
Manes.11G084700 Manihot esculenta HOM05D003739 ORTHO05D003996 1.2e-87 328.6 762 36.2
Gohir.D09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 3.8e-86 323.6 739 36.4
Prupe.8G091800 Prunus persica HOM05D003739 ORTHO05D003996 1.0e-83 315.5 756 36.2
Duzib187G1144 Durio zibethinus HOM05D003739 ORTHO05D003996 2.3e-83 314.3 748 35.4
Gorai.006G107300 Gossypium raimondii HOM05D003739 ORTHO05D003996 3.9e-83 313.5 739 36.1
Cc09_g05210 Coffea canephora HOM05D003739 ORTHO05D003996 1.1e-82 312.0 727 35.6
Thecc.08G060300 Theobroma cacao HOM05D003739 ORTHO05D003996 2.8e-81 307.4 703 37.1
TAR628G0054 Trochodendron aralioides HOM05D003739 ORTHO05D003996 5.5e-77 293.1 840 33.5
Atru.chr12.1298 Acer truncatum HOM05D003739 ORTHO05D003996 8.0e-76 289.3 719 35.3
CANSAT54G2857 Cannabis sativa HOM05D003739 ORTHO05D003996 2.3e-75 287.7 770 33.4
Nn4g24182 Nelumbo nucifera HOM05D003739 ORTHO05D003996 3.0e-75 287.3 802 33.3
COL.COLO4_32233 Corchorus olitorius HOM05D003739 ORTHO05D003996 5.2e-75 286.6 762 33.3
MD10G1070200 Malus domestica HOM05D003739 ORTHO05D003996 2.8e-73 280.8 741 34.0
MSTRG.9105 Avicennia marina HOM05D003739 ORTHO05D003996 3.7e-73 280.4 745 34.1
Oeu005537.3 Olea europaea HOM05D003739 ORTHO05D003996 1.8e-72 278.1 761 34.4
Potri.010G019600 Populus trichocarpa HOM05D003739 ORTHO05D003996 4.1e-72 276.9 766 32.6
ClCG01G008230 Citrullus lanatus HOM05D003739 ORTHO05D003996 1.0e-70 272.3 800 32.4
Lalb_Chr11g0068001 Lupinus albus HOM05D003739 ORTHO05D003996 2.2e-70 271.2 306 53.6
Sopen02g026250 Solanum pennellii HOM05D003739 ORTHO05D003996 1.1e-69 268.9 742 32.7
Actinidia35828 Actinidia chinensis HOM05D003739 ORTHO05D003996 4.2e-69 266.9 803 33.0
CsaV3_5G020720 Cucumis sativus L. HOM05D003739 ORTHO05D003996 7.2e-69 266.2 765 32.5
Sed0001527 Sechium edule HOM05D003739 ORTHO05D003996 8.0e-68 262.7 785 32.4
Gohir.A09G091100 Gossypium hirsutum HOM05D003739 ORTHO05D003996 1.8e-67 261.5 740 33.0
CANSAT11G0250 Cannabis sativa HOM05D003739 ORTHO05D003996 4.0e-67 260.4 728 32.6
CAN.G809.70 Capsicum annuum HOM05D003739 ORTHO05D003996 1.2e-66 258.8 724 32.6
PGSC0003DMG402017733 Solanum tuberosum HOM05D003739 ORTHO05D003996 1.3e-65 255.4 732 32.1
RcHm_v2.0_Chr5g0054461 Rosa chinensis HOM05D003739 ORTHO05D003996 8.3e-65 252.7 777 32.7
Nitab4.5_0010401g0020 Nicotiana tabacum HOM05D003739 ORTHO05D003996 7.7e-63 246.1 671 32.8
Peaxi162Scf00048g01417 Petunia axillaris HOM05D003739 ORTHO05D003996 7.7e-63 246.1 742 30.7
arahy.Tifrunner.gnm1.ann1.H3NIN5 Arachis hypogaea HOM05D003739 ORTHO05D003996 1.0e-62 245.7 293 47.8
Atru.chr5.3065 Acer truncatum HOM05D003739 ORTHO05D003996 1.3e-62 245.4 296 52.0
Sabra10G0016300 Salix brachista HOM05D003739 ORTHO05D003996 2.9e-62 244.2 425 40.2
RcHm_v2.0_Chr6g0265811 Rosa chinensis HOM05D003739 ORTHO05D003996 9.5e-61 239.2 766 32.6
Nitab4.5_0006794g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 2.8e-60 237.7 722 30.5
LjContig00222g0016564 Lotus japonicus HOM05D003739 ORTHO05D003996 8.0e-60 236.1 289 51.2
Glyma.01G228200 Glycine max HOM05D003739 ORTHO05D003996 1.5e-58 231.9 735 30.5
PSO339G5323 Papaver somniferum HOM05D003739 ORTHO05D003996 4.9e-57 226.9 802 29.4
AUR62005990 Chenopodium quinoa HOM05D003739 ORTHO05D003996 6.3e-57 226.5 720 30.6
Cpa.g.sc14.123 Carica papaya HOM05D003739 ORTHO05D003996 1.1e-56 225.7 759 30.6
VMungo1215G1752 Vigna mungo HOM05D003739 ORTHO05D003996 1.1e-56 225.7 273 49.5
Glyma.11G010900 Glycine max HOM05D003739 ORTHO05D003996 1.4e-56 225.3 777 30.2
Eucgr.A01623 Eucalyptus grandis HOM05D003739 ORTHO05D003996 1.6e-55 221.9 716 34.4
FvH4_2g09520 Fragaria vesca HOM05D003739 ORTHO05D003996 1.3e-54 218.8 767 30.5
Sed0009728 Sechium edule HOM05D003739 ORTHO05D003996 2.9e-54 217.6 461 35.6
TPR.G2246 Trifolium pratense HOM05D003739 ORTHO05D003996 6.6e-54 216.5 313 46.6
PGR042G2822 Punica granatum HOM05D003739 ORTHO05D003996 1.5e-53 215.3 724 32.2
AUR62028080 Chenopodium quinoa HOM05D003739 ORTHO05D003996 1.9e-53 214.9 722 29.4
FAN24G2517 Fragaria x ananassa HOM05D003739 ORTHO05D003996 2.5e-53 214.5 775 29.9
SGA_v2.0_scaffold62G21539 Striga asiatica HOM05D003739 ORTHO05D003996 3.3e-53 214.2 731 35.4
FAN27G2905 Fragaria x ananassa HOM05D003739 ORTHO05D003996 5.6e-53 213.4 768 29.6
Phvul.002G039700 Phaseolus vulgaris HOM05D003739 ORTHO05D003996 7.3e-53 213.0 717 35.6
arahy.Tifrunner.gnm1.ann1.TF9NF6 Arachis hypogaea HOM05D003739 ORTHO05D003996 1.2e-52 212.2 303 44.2
ECA234G4722 Erigeron canadensis HOM05D003739 ORTHO05D003996 1.2e-52 212.2 717 29.8
Aqoxy2G03991 Aquilegia oxysepala HOM05D003739 ORTHO05D003996 1.6e-52 211.8 777 29.5
PSO675G5166 Papaver somniferum HOM05D003739 ORTHO05D003996 6.1e-52 209.9 740 30.8
Nitab4.5_0004903g0060 Nicotiana tabacum HOM05D003739 ORTHO05D003996 1.4e-51 208.8 725 29.2
FAN15G1163 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.8e-51 208.4 763 29.2
Psat7g051640 Pisum sativum HOM05D003739 ORTHO05D003996 1.5e-50 205.3 279 47.0
PSO541G6540 Papaver somniferum HOM05D003739 ORTHO05D003996 5.8e-50 203.4 305 43.9
Lj8C306T17 Lonicera japonica HOM05D003739 ORTHO05D003996 1.3e-49 202.2 649 33.6
Migut.F00900 Erythranthe guttata HOM05D003739 ORTHO05D003996 2.2e-49 201.4 745 28.9
vmacro15435 Vaccinium macrocarpon HOM05D003739 ORTHO05D003996 2.4e-48 198.0 808 28.7
unitig_46.g18632 Utricularia gibba HOM05D003739 ORTHO05D003996 6.0e-47 193.4 214 50.0
THA.LOC104800691 Tarenaya hassleriana HOM05D003739 ORTHO05D003996 6.6e-46 189.9 707 30.0
Lj6g0022884 Lotus japonicus HOM05D003739 ORTHO05D003996 4.3e-45 187.2 187 56.7
CDE06G1699 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 7.3e-45 186.4 291 43.3
Dinv05658 Davidia involucrata HOM05D003739 ORTHO05D003996 2.8e-44 184.5 592 32.6
Dinv05659 Davidia involucrata HOM05D003739 ORTHO05D003996 6.2e-44 183.3 160 60.6
MBI16_g35489_MAGBIO Magnolia biondii HOM05D033968 ORTHO05D003996 6.2e-44 183.3 213 50.2
Medtr8g091830 Medicago truncatula HOM05D003739 ORTHO05D003996 1.1e-43 182.6 684 33.3
Ca_17694_v3 Cicer arietinum L. HOM05D003739 ORTHO05D003996 1.8e-43 181.8 699 30.0
Hund09717 Selenicereus undatus HOM05D003739 ORTHO05D003996 5.2e-43 180.3 745 28.9
AL7G11100 Arabidopsis lyrata HOM05D003739 ORTHO05D003996 1.2e-42 179.1 278 42.1
Hund09716 Selenicereus undatus HOM05D003739 ORTHO05D003996 1.5e-42 178.7 741 29.7
TAR376G0790 Trochodendron aralioides HOM05D003739 ORTHO05D003996 3.4e-42 177.6 268 44.0
PSO063G1830 Papaver somniferum HOM05D003739 ORTHO05D003996 3.7e-41 174.1 413 34.6
AT4G39160 Arabidopsis thaliana HOM05D003739 ORTHO05D003996 6.4e-41 173.3 276 42.0
Lsat_1_v5_gn_5_112881 Lactuca sativa HOM05D003739 ORTHO05D003996 1.9e-40 171.8 604 30.1
SalBow6G4317 Salvia bowleyana HOM05D003739 ORTHO05D003996 1.9e-40 171.8 205 50.2
DCAR_004344 Daucus carota HOM05D003739 ORTHO05D003996 3.2e-40 171.0 731 26.9
Hma1.2p1_1073F.1_g254250 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 1.2e-39 169.1 137 62.8
A08p23790 Brassica napus HOM05D003739 ORTHO05D003996 4.6e-39 167.2 280 38.6
BraA08t34331Z Brassica rapa HOM05D003739 ORTHO05D003996 1.0e-38 166.0 280 38.6
Aa31LG6G16100 Aethionema arabicum HOM05D003739 ORTHO05D003996 1.7e-38 165.2 286 39.5
Psat7g051160 Pisum sativum HOM05D003739 ORTHO05D003996 1.7e-38 165.2 266 44.0
BcaNung03888 Brassica carinata HOM05D003739 ORTHO05D003996 5.1e-38 163.7 261 40.6
EL10Ac3g05170 Beta vulgaris HOM05D003739 ORTHO05D003996 3.3e-37 161.0 748 27.7
C03p77640 Brassica napus HOM05D003739 ORTHO05D003996 5.6e-37 160.2 729 28.4
ATR0564G411 Amborella trichopoda HOM05D003739 ORTHO05D003996 7.3e-37 159.8 222 42.8
BolC7t46745H Brassica oleracea HOM05D003739 ORTHO05D003996 9.5e-37 159.5 271 38.7
CARHR247590 Cardamine hirsuta HOM05D003739 ORTHO05D003996 1.6e-36 158.7 280 38.6
FvH4_2g03400 Fragaria vesca HOM05D003739 ORTHO05D003996 2.1e-36 158.3 516 29.8
HanXRQChr10g0289001 Helianthus annuus HOM05D003739 ORTHO05D003996 4.7e-36 157.1 290 37.6
BolC3t20021H Brassica oleracea HOM05D003739 ORTHO05D003996 1.4e-35 155.6 728 28.4
BcaB03g12246 Brassica carinata HOM05D003739 ORTHO05D003996 2.3e-35 154.8 273 38.1
HPP92_028201 Vanilla planifolia HOM05D003739 ORTHO05D003996 2.3e-35 154.8 250 39.2
BraA06t27734Z Brassica rapa HOM05D003739 ORTHO05D003996 4.0e-35 154.1 275 41.1
A06p48670 Brassica napus HOM05D003739 ORTHO05D003996 2.0e-34 151.8 273 40.3
Carub.0007s0104 Capsella rubella HOM05D003739 ORTHO05D003996 3.4e-34 151.0 314 35.7
FvH4_2g09510 Fragaria vesca HOM05D003739 ORTHO05D003996 7.5e-34 149.8 736 27.2
CARHR106820 Cardamine hirsuta HOM05D003739 ORTHO05D003996 1.7e-33 148.7 291 38.1
Thhalv10024751m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 1.7e-33 148.7 216 44.4
Sp3g07810 Schrenkiella parvula HOM05D003739 ORTHO05D000043 2.2e-33 148.3 290 36.9
Medtr8g091850 Medicago truncatula HOM05D003739 ORTHO05D003996 8.3e-33 146.4 185 48.1
C09p07090 Brassica napus HOM05D003739 ORTHO05D003996 1.4e-32 145.6 272 36.8
BcaC01g00285 Brassica carinata HOM05D000394 ORTHO05D000299 1.2e-31 142.5 728 28.8
FAN24G0708 Fragaria x ananassa HOM05D003739 ORTHO05D003996 1.2e-31 142.5 513 30.4
BcaC04g23559 Brassica carinata HOM05D003739 ORTHO05D003996 3.5e-31 141.0 279 35.1
TPR.G2191 Trifolium pratense HOM05D003739 ORTHO05D003996 3.5e-31 141.0 238 42.0
BolC9t53626H Brassica oleracea HOM05D003739 ORTHO05D003996 6.6e-30 136.7 273 35.9
BraA09t36326Z Brassica rapa HOM05D003739 ORTHO05D003996 1.9e-29 135.2 265 35.8
A09p06800 Brassica napus HOM05D003739 ORTHO05D003996 3.3e-29 134.4 269 36.1
C07p63340 Brassica napus HOM05D003739 ORTHO05D003996 2.1e-28 131.7 243 37.9
Aa31LG7G15010 Aethionema arabicum HOM05D003739 ORTHO05D003996 6.2e-28 130.2 414 30.2
SEGI_13436 Sequoiadendron giganteum HOM05D003739 ORTHO05D003996 5.2e-27 127.1 136 46.3
RcHm_v2.0_Chr6g0265821 Rosa chinensis HOM05D003739 ORTHO05D003996 8.9e-27 126.3 624 29.3
MELO3C005063.2 Cucumis melo HOM05D003739 ORTHO05D003996 3.4e-26 124.4 400 31.0
BcaNung02353 Brassica carinata HOM05D003739 ORTHO05D003996 1.3e-25 122.5 229 38.0
Glyma.10G205233 Glycine max HOM05D003739 ORTHO05D003996 2.9e-25 121.3 221 39.4
Medtr4g067250 Medicago truncatula HOM05D003739 ORTHO05D003996 4.9e-25 120.6 182 37.4
Dinv13445 Davidia involucrata HOM05D003739 ORTHO05D003996 1.1e-24 119.4 199 36.7
Actinidia20856 Actinidia chinensis HOM05D003739 ORTHO05D003996 1.4e-24 119.0 374 31.8
Glyma.20G185167 Glycine max HOM05D003739 ORTHO05D003996 7.1e-24 116.7 167 44.3
Zm00001eb261130 Zea mays HOM05D025681 ORTHO05D003996 1.2e-23 115.9 184 39.1
FvH4_2g03360 Fragaria vesca HOM05D003739 ORTHO05D003996 1.9e-21 108.6 499 27.5
Zm00001eb249730 Zea mays HOM05D025681 ORTHO05D003996 1.9e-21 108.6 121 46.3
Atru.chr12.1559 Acer truncatum HOM05D003739 ORTHO05D003996 5.6e-21 107.1 454 28.9
FAN27G3438 Fragaria x ananassa HOM05D003739 ORTHO05D003996 7.3e-21 106.7 517 26.1
AagrBONN_evm.TU.Sc2ySwM_340.755 Anthoceros agrestis HOM05D003739 ORTHO05D003996 1.2e-18 99.4 161 37.9
AagrBONN_evm.TU.Sc2ySwM_344.3723 Anthoceros agrestis HOM05D003739 ORTHO05D003996 1.2e-18 99.4 161 37.9
AagrBONN_evm.TU.Sc2ySwM_368.1462 Anthoceros agrestis HOM05D000001 ORTHO05D000003 2.6e-18 98.2 240 30.4
Pp3c18_8710 Physcomitrium patens HOM05D003739 ORTHO05D003996 3.8e-17 94.4 278 29.9
CARHR112440 Cardamine hirsuta HOM05D003739 ORTHO05D003996 4.9e-17 94.0 62 67.7
Pp3c21_11880 Physcomitrium patens HOM05D003739 ORTHO05D003996 6.4e-17 93.6 116 39.7
AagrBONN_evm.TU.Sc2ySwM_344.4525 Anthoceros agrestis HOM05D003739 ORTHO05D003996 8.4e-17 93.2 274 29.2
FAN15G1290 Fragaria x ananassa HOM05D003739 ORTHO05D003996 8.4e-17 93.2 162 37.7
Mapoly0023s0090 Marchantia polymorpha HOM05D003739 ORTHO05D003996 4.2e-16 90.9 167 33.5
Sc19g0000570 Simmondsia chinensis HOM05D003739 ORTHO05D003996 5.1e-14 84.0 523 25.6
CBR_g31667 Chara braunii HOM05D003739 ORTHO05D003996 8.7e-14 83.2 111 38.7
Manes.04G075172 Manihot esculenta HOM05D003739 ORTHO05D003996 3.3e-13 81.3 84 54.8
TPR.G20410 Trifolium pratense HOM05D003739 ORTHO05D003996 7.3e-13 80.1 114 46.5
MCO01G601 Micromonas commoda HOM05D003739 ORTHO05D003996 9.6e-13 79.7 114 35.1
Glyma.16G093750 Glycine max HOM05D003739 ORTHO05D003996 2.8e-12 78.2 100 47.0
Dinv07186 Davidia involucrata HOM05D000053 ORTHO05D045112 6.9e-11 73.6 134 33.6
FAN20G1594 Fragaria x ananassa HOM05D003739 ORTHO05D003996 9.0e-11 73.2 127 40.9
FAN24G0282 Fragaria x ananassa HOM05D003739 ORTHO05D003996 9.0e-11 73.2 131 39.7
CDE02G4347 Ceratophyllum demersum HOM05D003739 ORTHO05D003996 1.5e-10 72.4 55 61.8
Actinidia05492 Actinidia chinensis HOM05D003739 ORTHO05D003996 9.9e-10 69.7 90 50.0
SMO293G0020 Selaginella moellendorffii HOM05D027797 ORTHO05D003996 4.9e-09 67.4 82 41.5
Hma1.2p1_0088F.1_g045220 Hydrangea macrophylla HOM05D003739 ORTHO05D003996 8.4e-09 66.6 54 61.1
Atru.chr5.3066 Acer truncatum HOM05D003739 ORTHO05D003996 4.2e-08 64.3 317 27.8
HPP92_008918 Vanilla planifolia HOM05D003739 ORTHO05D003996 3.5e-07 61.2 120 35.0
Thhalv10000433m.g Eutrema salsugineum HOM05D003739 ORTHO05D003996 4.6e-07 60.8 70 47.1
Lj8A306T63 Lonicera japonica HOM05D003739 ORTHO05D003996 1.8e-06 58.9 95 40.0


User provided reference genes

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