Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G1606 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.4e-51 207.2 244 100.0
TWI75G0359 Tripterygium wilfordii HOM05D006591 ORTHO05D007861 1.1e-35 154.5 118 81.4
QL03p070967 Quercus lobata HOM05D006591 ORTHO05D007861 1.0e-30 137.9 118 60.2
Ciclev10032613m.g Citrus clementina HOM05D006591 ORTHO05D007861 4.9e-28 129.0 110 72.7
Peaxi162Scf00314g00027 Petunia axillaris HOM05D006591 ORTHO05D007861 4.9e-28 129.0 103 73.8
Atru.chr11.1685 Acer truncatum HOM05D006591 ORTHO05D007861 1.1e-27 127.9 120 69.2
COL.COLO4_05797 Corchorus olitorius HOM05D006591 ORTHO05D007861 1.9e-27 127.1 110 61.8
Solyc05g012590.4 Solanum lycopersicum HOM05D006591 ORTHO05D007861 2.4e-27 126.7 108 61.1
Duzib268G0337 Durio zibethinus HOM05D006591 ORTHO05D007861 3.2e-27 126.3 116 58.6
Psat2g128080 Pisum sativum HOM05D006591 ORTHO05D007861 3.2e-27 126.3 120 67.5
Sopen05g007420 Solanum pennellii HOM05D006591 ORTHO05D007861 3.2e-27 126.3 108 74.1
PGSC0003DMG400028326 Solanum tuberosum HOM05D006591 ORTHO05D007861 4.1e-27 125.9 108 74.1
CANSAT64G0984 Cannabis sativa HOM05D006591 ORTHO05D007861 9.2e-27 124.8 120 68.3
Phvul.002G068900 Phaseolus vulgaris HOM05D006591 ORTHO05D007861 9.2e-27 124.8 118 55.1
Cfa008903 Carpinus fangiana HOM05D006591 ORTHO05D007861 2.0e-26 123.6 244 82.8
Gohir.D05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 2.0e-26 123.6 120 57.5
Actinidia19919 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.7e-26 123.2 120 57.5
Glyma.02G113900 Glycine max HOM05D006591 ORTHO05D007861 3.5e-26 122.9 121 57.9
GSVIVG01012181001 Vitis vinifera HOM05D006591 ORTHO05D007861 6.0e-26 122.1 120 65.0
MELO3C002930.2 Cucumis melo HOM05D006591 ORTHO05D007861 1.0e-25 121.3 120 54.2
Dinv16706 Davidia involucrata HOM05D006591 ORTHO05D007861 1.3e-25 120.9 121 68.6
Gohir.A05G306200 Gossypium hirsutum HOM05D006591 ORTHO05D007861 3.0e-25 119.8 120 55.0
BcaC04g21487 Brassica carinata HOM05D006591 ORTHO05D007861 5.0e-25 119.0 113 53.1
C09p31230 Brassica napus HOM05D006591 ORTHO05D007861 5.0e-25 119.0 113 53.1
BolC9t55979H Brassica oleracea HOM05D006591 ORTHO05D007861 5.0e-25 119.0 113 53.1
Lalb_Chr10g0098581 Lupinus albus HOM05D006591 ORTHO05D007861 6.6e-25 118.6 122 66.4
Cpa.g.sc1.95 Carica papaya HOM05D006591 ORTHO05D007861 1.1e-24 117.9 120 50.8
Gorai.009G326200 Gossypium raimondii HOM05D006591 ORTHO05D007861 1.1e-24 117.9 108 58.3
Lj2g0025600 Lotus japonicus HOM05D006591 ORTHO05D007861 1.1e-24 117.9 121 64.5
TPR.G2283 Trifolium pratense HOM05D006591 ORTHO05D007861 1.1e-24 117.9 120 53.3
Oeu028261.1 Olea europaea HOM05D006591 ORTHO05D007861 1.9e-24 117.1 117 68.4
CSS0032544 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.5e-24 116.7 122 52.5
Haze_11932 Corylus avellana HOM05D006591 ORTHO05D007861 2.5e-24 116.7 145 48.3
CAN.G1340.9 Capsicum annuum HOM05D006591 ORTHO05D007861 4.3e-24 115.9 103 71.8
Glyma.01G055500 Glycine max HOM05D006591 ORTHO05D007861 7.3e-24 115.2 120 65.0
Thecc.02G335700 Theobroma cacao HOM05D006591 ORTHO05D007861 7.3e-24 115.2 120 65.8
Manes.05G107800 Manihot esculenta HOM05D006591 ORTHO05D007861 9.5e-24 114.8 114 69.3
PGR119G1238 Punica granatum HOM05D006591 ORTHO05D007861 1.6e-23 114.0 120 49.2
VMungo1215G0675 Vigna mungo HOM05D006591 ORTHO05D007861 1.6e-23 114.0 118 65.3
CiPaw.06G090100 Carya illinoinensis HOM05D006591 ORTHO05D007861 2.1e-23 113.6 120 64.2
MD16G1064400 Malus domestica HOM05D006591 ORTHO05D007861 4.7e-23 112.5 121 64.5
arahy.Tifrunner.gnm1.ann1.09DLU7 Arachis hypogaea HOM05D006591 ORTHO05D007861 6.2e-23 112.1 120 63.3
DCAR_027452 Daucus carota HOM05D006591 ORTHO05D007861 8.0e-23 111.7 120 62.5
Nn4g23331 Nelumbo nucifera HOM05D006591 ORTHO05D007861 1.4e-22 110.9 121 63.6
Potri.010G161300 Populus trichocarpa HOM05D006591 ORTHO05D007861 1.4e-22 110.9 112 68.8
Prupe.1G282400 Prunus persica HOM05D006591 ORTHO05D007861 1.4e-22 110.9 121 64.5
Actinidia31944 Actinidia chinensis HOM05D006591 ORTHO05D007861 2.3e-22 110.2 116 54.3
HanXRQChr17g0545461 Helianthus annuus HOM05D006591 ORTHO05D007861 4.0e-22 109.4 123 57.7
Thhalv10004832m.g Eutrema salsugineum HOM05D006591 ORTHO05D007861 8.9e-22 108.2 115 53.0
arahy.Tifrunner.gnm1.ann1.74ATFD Arachis hypogaea HOM05D006591 ORTHO05D007861 1.2e-21 107.8 120 50.0
MD13G1065800 Malus domestica HOM05D006591 ORTHO05D007861 1.2e-21 107.8 121 62.8
Hund25197 Selenicereus undatus HOM05D006591 ORTHO05D007861 1.2e-21 107.8 111 51.4
vmacro16368 Vaccinium macrocarpon HOM05D006591 ORTHO05D007861 2.0e-21 107.1 117 50.4
BraA09t38037Z Brassica rapa HOM05D006591 ORTHO05D007861 3.4e-21 106.3 114 60.5
Sabra10G0122800 Salix brachista HOM05D006591 ORTHO05D007861 3.4e-21 106.3 113 67.3
ECA246G1963 Erigeron canadensis HOM05D006591 ORTHO05D007861 5.8e-21 105.5 115 63.5
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.7e-20 104.0 111 57.7
A09p24440 Brassica napus HOM05D006591 ORTHO05D007861 1.7e-20 104.0 106 63.2
Lj3C1032T3 Lonicera japonica HOM05D006591 ORTHO05D007861 2.9e-20 103.2 121 65.3
MSTRG.2323 Avicennia marina HOM05D006591 ORTHO05D007861 3.7e-20 102.8 116 65.5
Medtr5g043640 Medicago truncatula HOM05D006591 ORTHO05D007861 3.7e-20 102.8 113 62.8
Carub.0005s0239 Capsella rubella HOM05D006591 ORTHO05D007861 4.9e-20 102.4 116 59.5
Sc11g0002290 Simmondsia chinensis HOM05D006591 ORTHO05D007861 6.4e-20 102.1 114 64.0
THA.LOC104801815 Tarenaya hassleriana HOM05D006591 ORTHO05D007861 6.4e-20 102.1 112 62.5
Aqoxy3G00449 Aquilegia oxysepala HOM05D006591 ORTHO05D007861 1.4e-19 100.9 111 69.4
BcaB07g30669 Brassica carinata HOM05D006591 ORTHO05D007861 1.4e-19 100.9 114 61.4
PSO017G3262 Papaver somniferum HOM05D006591 ORTHO05D007861 1.4e-19 100.9 119 62.2
Rhsim12G0134100 Rhododendron simsii HOM05D006591 ORTHO05D007861 3.2e-19 99.8 152 40.8
Sp2g14340 Schrenkiella parvula HOM05D006591 ORTHO05D007861 3.2e-19 99.8 114 58.8
AL5G13180 Arabidopsis lyrata HOM05D006591 ORTHO05D007861 5.4e-19 99.0 112 59.8
Cc11_g12350 Coffea canephora HOM05D006591 ORTHO05D007861 5.4e-19 99.0 116 50.0
Lsat_1_v5_gn_3_56260 Lactuca sativa HOM05D006591 ORTHO05D007861 5.4e-19 99.0 124 58.9
SGA_v2.0_scaffold287G47153 Striga asiatica HOM05D006591 ORTHO05D007861 5.4e-19 99.0 120 64.2
CsaV3_5G025480 Cucumis sativus L. HOM05D006591 ORTHO05D007861 1.6e-18 97.4 120 59.2
CSS0024373 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 2.1e-18 97.1 109 49.5
Ca_04911_v3 Cicer arietinum L. HOM05D006591 ORTHO05D007861 3.5e-18 96.3 120 59.2
CSS0002938 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.6e-18 95.9 109 49.5
CSS0020090 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 4.6e-18 95.9 109 49.5
TPR.G24426 Trifolium pratense HOM05D006591 ORTHO05D007861 4.6e-18 95.9 120 59.2
CSS0029304 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 6.0e-18 95.5 109 54.1
EL10Ac6g14958 Beta vulgaris HOM05D006591 ORTHO05D007861 3.0e-17 93.2 105 58.1
AagrBONN_evm.TU.Sc2ySwM_344.1136 Anthoceros agrestis HOM05D006591 ORTHO05D007861 3.9e-17 92.8 105 47.6
TAR374G1558 Trochodendron aralioides HOM05D006591 ORTHO05D007861 5.1e-17 92.4 119 56.3
CARHR145770 Cardamine hirsuta HOM05D006591 ORTHO05D007861 6.6e-17 92.0 110 59.1
ATR0111G005 Amborella trichopoda HOM05D006591 ORTHO05D007861 8.6e-17 91.7 120 55.8
RcHm_v2.0_Chr4g0438821 Rosa chinensis HOM05D006591 ORTHO05D007861 1.1e-16 91.3 113 61.1
FAN12G1471 Fragaria x ananassa HOM05D006591 ORTHO05D007861 1.9e-16 90.5 106 61.3
PSO478G2874 Papaver somniferum HOM05D006591 ORTHO05D007861 4.3e-16 89.4 120 58.3
Migut.E00061 Erythranthe guttata HOM05D006591 ORTHO05D007861 1.2e-15 87.8 116 60.3
FvH4_4g30470 Fragaria vesca HOM05D006591 ORTHO05D007861 1.6e-15 87.4 112 60.7
Eucgr.G02461 Eucalyptus grandis HOM05D006591 ORTHO05D007861 2.1e-15 87.0 115 56.5
FAN07G2187 Fragaria x ananassa HOM05D006591 ORTHO05D007861 3.6e-15 86.3 107 58.9
FAN17G0139 Fragaria x ananassa HOM05D006591 ORTHO05D007861 4.7e-15 85.9 105 60.0
FAN22G1196 Fragaria x ananassa HOM05D006591 ORTHO05D007861 6.2e-15 85.5 107 58.9
Mapoly0001s0139 Marchantia polymorpha HOM05D006591 ORTHO05D007861 8.1e-15 85.1 98 44.9
AT2G03430 Arabidopsis thaliana HOM05D006591 ORTHO05D007861 2.3e-14 83.6 101 59.4
Pp3c6_21850 Physcomitrium patens HOM05D006591 ORTHO05D007861 6.8e-14 82.0 101 46.5
SEGI_35394 Sequoiadendron giganteum HOM05D006591 ORTHO05D007861 6.8e-14 82.0 76 51.3
Ah.02g126600 Amaranthus hybridus HOM05D006591 ORTHO05D007861 8.9e-14 81.6 115 46.1
C06p01310 Brassica napus HOM05D006591 ORTHO05D007861 8.9e-14 81.6 122 45.1
Nitab4.5_0000334g0240 Nicotiana tabacum HOM05D006591 ORTHO05D007861 2.0e-13 80.5 99 47.5
Zm00001eb214530 Zea mays HOM05D006591 ORTHO05D007861 4.4e-13 79.3 122 54.1
unitig_22.g5555 Utricularia gibba HOM05D006591 ORTHO05D007861 2.9e-12 76.6 101 57.4
CDE07G0054 Ceratophyllum demersum HOM05D006591 ORTHO05D007861 3.7e-12 76.3 119 49.6
HPP92_018457 Vanilla planifolia HOM05D006591 ORTHO05D007861 3.7e-12 76.3 112 55.4
CSS0029980 Camellia sinensis var. sinensis HOM05D006591 ORTHO05D007861 8.3e-12 75.1 109 44.0
CBR_g23768 Chara braunii HOM05D006591 ORTHO05D007861 9.2e-11 71.6 102 39.2
BcaC02g07876 Brassica carinata HOM05D006591 ORTHO05D007861 1.2e-10 71.2 109 42.2
Sed0000747 Sechium edule HOM05D006591 ORTHO05D007861 1.3e-09 67.8 55 61.8
Cre02.g117550 Chlamydomonas reinhardtii HOM05D006591 ORTHO05D007861 1.7e-09 67.4 105 40.0
EL10Ac6g14960 Beta vulgaris HOM05D006591 ORTHO05D007861 8.6e-09 65.1 99 37.4
Gohir.D10G139700 Gossypium hirsutum HOM05D006591 ORTHO05D007861 9.5e-08 61.6 65 50.8
EL10Ac6g14961 Beta vulgaris HOM05D027931 ORTHO05D007861 1.2e-07 61.2 107 31.8
BolC4t27718H Brassica oleracea HOM05D006591 ORTHO05D007861 2.1e-07 60.5 138 36.2


User provided reference genes

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