Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.9e-220 768.8 386 100.0
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 5.3e-178 627.9 382 79.1
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 5.3e-178 627.9 382 79.1
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 7.6e-177 624.0 382 80.1
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 1.0e-176 623.6 382 79.6
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 2.9e-176 622.1 383 80.4
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 4.9e-176 621.3 382 79.6
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.5e-175 619.0 386 78.8
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 1.6e-174 616.3 382 79.3
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 2.1e-174 615.9 381 79.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 6.0e-174 614.4 381 79.3
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.3e-173 612.5 383 78.6
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 3.0e-173 612.1 383 78.6
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 5.1e-173 611.3 376 78.5
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 1.1e-172 610.1 383 77.5
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 1.1e-172 610.1 376 80.3
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 1.5e-172 609.8 382 78.0
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 3.3e-172 608.6 389 77.4
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 5.7e-172 607.8 383 77.0
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 1.6e-171 606.3 383 76.5
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 8.2e-171 604.0 382 78.0
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 1.1e-170 603.6 384 78.6
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 1.1e-170 603.6 383 76.5
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.8e-170 602.8 386 76.4
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 4.1e-170 601.7 379 77.3
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 5.3e-170 601.3 381 78.0
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 6.9e-170 600.9 381 76.4
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 2.0e-169 599.4 391 77.2
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 2.0e-169 599.4 390 76.9
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.0e-169 599.4 383 76.2
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 4.5e-169 598.2 383 76.2
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 7.6e-169 597.4 381 77.2
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.0e-168 597.0 381 77.2
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.7e-168 596.3 383 75.7
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 2.9e-168 595.5 376 77.9
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 3.8e-168 595.1 378 76.7
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 5.0e-168 594.7 381 76.4
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 5.0e-168 594.7 386 75.6
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.9e-167 592.8 383 76.0
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 3.2e-167 592.0 385 75.3
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 4.2e-167 591.7 380 75.0
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 4.2e-167 591.7 402 73.1
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.2e-166 590.1 383 75.2
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 1.2e-166 590.1 383 75.2
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 7.9e-166 587.4 376 76.3
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 7.9e-166 587.4 386 73.8
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 7.9e-166 587.4 382 75.7
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 1.0e-165 587.0 381 76.1
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.8e-165 586.3 383 73.6
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 1.5e-164 583.2 378 75.7
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.9e-164 582.8 379 75.2
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 4.3e-164 581.6 383 73.1
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.3e-163 580.1 381 75.1
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 1.6e-163 579.7 380 75.5
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 3.7e-163 578.6 376 75.0
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 8.2e-163 577.4 381 72.7
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 1.4e-162 576.6 381 71.9
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 9.1e-162 573.9 381 74.8
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 9.1e-162 573.9 378 71.2
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 9.1e-162 573.9 376 72.1
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-161 573.5 383 72.3
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 1.2e-161 573.5 381 75.1
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 4.5e-161 571.6 384 72.4
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 5.9e-161 571.2 383 72.8
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 5.9e-161 571.2 381 72.7
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.0e-160 570.5 388 73.5
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 1.7e-160 569.7 379 71.0
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 1.7e-160 569.7 379 71.0
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 1.7e-160 569.7 384 70.1
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 2.9e-160 568.9 514 60.1
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 3.8e-160 568.5 384 70.1
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 4.2e-159 565.1 381 73.5
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 7.2e-159 564.3 389 69.4
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 2.3e-157 559.3 383 69.5
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 3.0e-157 558.9 383 74.9
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 2.0e-156 556.2 380 69.7
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.4e-156 555.1 383 69.7
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.8e-155 551.6 383 69.7
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 6.3e-155 551.2 383 68.4
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 5.3e-154 548.1 383 69.2
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 2.6e-153 545.8 424 66.0
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 9.4e-151 537.3 344 76.7
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 2.7e-150 535.8 384 65.9
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 3.6e-150 535.4 383 69.5
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 1.4e-149 533.5 353 72.2
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 1.8e-149 533.1 382 69.9
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 1.5e-148 530.0 382 67.3
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 2.0e-148 529.6 379 69.1
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 4.4e-148 528.5 383 65.0
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 4.1e-146 521.9 384 64.6
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 5.3e-146 521.5 381 67.7
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 7.0e-146 521.2 381 65.4
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 2.0e-145 519.6 305 81.6
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 5.0e-144 515.0 381 68.0
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 5.0e-144 515.0 383 68.1
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.3e-141 506.1 351 72.4
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 1.3e-139 500.4 310 80.6
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.0e-128 461.8 290 76.9
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 1.4e-125 453.8 385 62.9
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.9e-125 451.1 290 75.2
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 3.7e-123 445.7 332 69.0
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 1.8e-122 443.4 312 72.8
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 7.0e-122 441.4 306 72.2
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 2.3e-120 436.4 383 55.1
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 1.6e-118 430.3 378 55.8
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 2.7e-113 412.9 261 76.6
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.0e-108 396.7 385 51.4
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 3.7e-107 392.5 266 70.3
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 2.4e-106 389.8 376 52.4
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 5.4e-106 388.7 401 49.4
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 3.5e-105 386.0 376 57.4
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 4.7e-102 375.6 231 78.8
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 1.5e-95 354.0 271 66.4
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.6e-94 350.5 230 77.0
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 1.5e-71 274.2 240 58.8
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 2.4e-61 240.4 146 77.4
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 6.9e-61 238.8 428 36.2
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 7.6e-60 235.3 153 79.1
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 6.5e-59 232.3 397 36.3
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 8.4e-59 231.9 423 35.0
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 8.5e-51 205.3 149 67.8
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 1.2e-44 184.9 116 78.4
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.7e-38 163.3 107 70.1
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 2.2e-30 137.5 183 39.9
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 3.3e-23 113.6 146 49.3
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 3.7e-22 110.2 137 41.6
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 1.2e-20 105.1 62 80.6
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.2e-20 105.1 146 39.7
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 1.2e-20 105.1 97 59.8
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 4.2e-18 96.7 68 69.1
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 2.8e-14 84.0 69 53.6
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 4.8e-14 83.2 111 39.6
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 8.6e-11 72.4 36 91.7
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 1.5e-10 71.6 70 48.6
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 1.0e-08 65.5 36 83.3
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.2e-07 62.0 94 36.2


User provided reference genes

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