Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0817 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 4.9e-140 501.1 253 100.0
TWI75G0729 Tripterygium wilfordii HOM05D005496 ORTHO05D006677 7.3e-136 487.3 253 96.8
Atru.chr5.2543 Acer truncatum HOM05D005496 ORTHO05D006677 1.7e-129 466.1 254 91.7
Atru.chr5.2566 Acer truncatum HOM05D005496 ORTHO05D006677 1.7e-129 466.1 254 91.7
CiPaw.06G169300 Carya illinoinensis HOM05D005496 ORTHO05D006677 5.1e-129 464.5 254 90.9
Gohir.D12G022500 Gossypium hirsutum HOM05D005496 ORTHO05D006677 5.1e-129 464.5 253 90.5
Cpa.g.sc106.90 Carica papaya HOM05D005496 ORTHO05D006677 1.1e-128 463.4 253 90.1
Gohir.A12G022100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 1.1e-128 463.4 253 90.1
Dinv15765 Davidia involucrata HOM05D005496 ORTHO05D006677 1.6e-127 459.5 253 90.5
Thecc.02G107900 Theobroma cacao HOM05D005496 ORTHO05D006677 1.6e-127 459.5 253 90.1
Potri.009G095900 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.8e-127 458.8 255 90.6
CiPaw.05G011600 Carya illinoinensis HOM05D005496 ORTHO05D006677 2.4e-126 455.7 254 89.0
Dinv42193 Davidia involucrata HOM05D005496 ORTHO05D006677 4.0e-126 454.9 253 89.3
Manes.07G069764 Manihot esculenta HOM05D005496 ORTHO05D006677 4.0e-126 454.9 253 88.5
Thhalv10022824m.g Eutrema salsugineum HOM05D005496 ORTHO05D006677 8.9e-126 453.8 253 87.7
AT2G15240 Arabidopsis thaliana HOM05D005496 ORTHO05D006677 2.6e-125 452.2 253 87.4
AL3G46950 Arabidopsis lyrata HOM05D005496 ORTHO05D006677 3.4e-125 451.8 253 87.4
MD05G1089700 Malus domestica HOM05D005496 ORTHO05D006677 7.6e-125 450.7 252 88.1
C07p08630 Brassica napus HOM05D005496 ORTHO05D006677 9.9e-125 450.3 253 87.4
CsaV3_7G008130 Cucumis sativus L. HOM05D005496 ORTHO05D006677 9.9e-125 450.3 253 87.4
Carub.0003s2908 Capsella rubella HOM05D005496 ORTHO05D006677 1.3e-124 449.9 253 87.0
Prupe.8G135000 Prunus persica HOM05D005496 ORTHO05D006677 1.3e-124 449.9 252 88.1
ClCG02G006320 Citrullus lanatus HOM05D005496 ORTHO05D006677 2.9e-124 448.7 253 87.0
Eucgr.E02959 Eucalyptus grandis HOM05D005496 ORTHO05D006677 2.9e-124 448.7 253 87.4
Potri.001G300100 Populus trichocarpa HOM05D005496 ORTHO05D006677 2.9e-124 448.7 255 89.4
MELO3C018493.2 Cucumis melo HOM05D005496 ORTHO05D006677 3.8e-124 448.4 253 87.0
Sp3g28490 Schrenkiella parvula HOM05D005496 ORTHO05D006677 3.8e-124 448.4 253 86.6
CSS0023946 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 4.9e-124 448.0 250 87.6
CSS0028960 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 4.9e-124 448.0 250 87.6
BcaB07g31795 Brassica carinata HOM05D005496 ORTHO05D006677 8.4e-124 447.2 253 86.6
CANSAT25G1824 Cannabis sativa HOM05D005496 ORTHO05D006677 8.4e-124 447.2 255 87.1
CANSAT25G2648 Cannabis sativa HOM05D005496 ORTHO05D006677 8.4e-124 447.2 255 87.1
DCAR_021987 Daucus carota HOM05D005496 ORTHO05D006677 1.1e-123 446.8 253 87.0
Sed0023992 Sechium edule HOM05D005496 ORTHO05D006677 2.4e-123 445.7 253 85.4
GSVIVG01003155001 Vitis vinifera HOM05D005496 ORTHO05D006677 2.4e-123 445.7 257 87.2
BolC9t54157H Brassica oleracea HOM05D005496 ORTHO05D006677 3.2e-123 445.3 252 86.5
FvH4_2g05170 Fragaria vesca HOM05D005496 ORTHO05D006677 3.2e-123 445.3 254 87.8
MD10G1096900 Malus domestica HOM05D005496 ORTHO05D006677 5.4e-123 444.5 252 86.1
RcHm_v2.0_Chr6g0255081 Rosa chinensis HOM05D005496 ORTHO05D006677 7.1e-123 444.1 254 87.4
Sc18g0005590 Simmondsia chinensis HOM05D005496 ORTHO05D006677 1.2e-122 443.4 254 86.2
Sed0010088 Sechium edule HOM05D005496 ORTHO05D006677 1.6e-122 443.0 254 85.4
THA.LOC104807241 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 1.6e-122 443.0 253 85.8
PGR142G1113 Punica granatum HOM05D005496 ORTHO05D006677 2.1e-122 442.6 253 85.8
Actinidia17481 Actinidia chinensis HOM05D005496 ORTHO05D006677 2.7e-122 442.2 253 84.2
Gohir.D01G008100 Gossypium hirsutum HOM05D005496 ORTHO05D006677 2.7e-122 442.2 253 86.6
CSS0021038 Camellia sinensis var. sinensis HOM05D005496 ORTHO05D006677 7.8e-122 440.7 253 84.6
TAR376G0359 Trochodendron aralioides HOM05D005496 ORTHO05D006677 1.7e-121 439.5 249 85.1
Cc02_g19260 Coffea canephora HOM05D005496 ORTHO05D006677 3.9e-121 438.3 262 84.4
TAR628G1491 Trochodendron aralioides HOM05D005496 ORTHO05D006677 3.9e-121 438.3 249 85.1
PGSC0003DMG402025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 8.7e-121 437.2 254 85.0
Sopen01g049790 Solanum pennellii HOM05D005496 ORTHO05D006677 1.1e-120 436.8 254 84.6
Lalb_Chr06g0165461 Lupinus albus HOM05D005496 ORTHO05D006677 1.5e-120 436.4 253 85.0
Solyc01g107600.3 Solanum lycopersicum HOM05D005496 ORTHO05D006677 2.5e-120 435.6 254 84.6
Lj5g0001757 Lotus japonicus HOM05D005496 ORTHO05D006677 3.3e-120 435.3 253 84.2
THA.LOC104819553 Tarenaya hassleriana HOM05D005496 ORTHO05D006677 7.3e-120 434.1 253 84.2
Gorai.002G009400 Gossypium raimondii HOM05D005496 ORTHO05D006677 9.6e-120 433.7 253 85.0
FAN27G2869 Fragaria x ananassa HOM05D005496 ORTHO05D006677 1.3e-119 433.3 275 81.5
BolC7t41274H Brassica oleracea HOM05D005496 ORTHO05D006677 1.6e-119 433.0 239 88.3
Aqoxy6G02861 Aquilegia oxysepala HOM05D005496 ORTHO05D006677 2.1e-119 432.6 249 83.9
MSTRG.5341 Avicennia marina HOM05D005496 ORTHO05D006677 2.1e-119 432.6 250 84.0
A07p05380 Brassica napus HOM05D005496 ORTHO05D006677 2.1e-119 432.6 255 84.3
BraA07t28330Z Brassica rapa HOM05D005496 ORTHO05D006677 2.1e-119 432.6 256 84.0
Phvul.007G039900 Phaseolus vulgaris HOM05D005496 ORTHO05D006677 2.8e-119 432.2 256 82.4
Actinidia27972 Actinidia chinensis HOM05D005496 ORTHO05D006677 4.8e-119 431.4 280 77.9
Migut.N01167 Erythranthe guttata HOM05D005496 ORTHO05D006677 6.2e-119 431.0 254 83.1
Medtr1g107430 Medicago truncatula HOM05D005496 ORTHO05D006677 1.1e-118 430.3 258 83.3
TPR.G30567 Trifolium pratense HOM05D005496 ORTHO05D006677 1.4e-118 429.9 257 83.7
Glyma.10G262300 Glycine max HOM05D005496 ORTHO05D006677 2.4e-118 429.1 256 82.0
MSTRG.27744 Avicennia marina HOM05D005496 ORTHO05D006677 5.3e-118 427.9 254 83.1
PSO675G7162 Papaver somniferum HOM05D005496 ORTHO05D006677 5.3e-118 427.9 249 82.3
Ca_11075_v3 Cicer arietinum L. HOM05D005496 ORTHO05D006677 2.6e-117 425.6 257 82.5
PSO541G0750 Papaver somniferum HOM05D005496 ORTHO05D006677 2.6e-117 425.6 249 82.7
Lalb_Chr21g0308341 Lupinus albus HOM05D005496 ORTHO05D006677 5.8e-117 424.5 258 82.6
Peaxi162Scf00016g02325 Petunia axillaris HOM05D005496 ORTHO05D006677 7.6e-117 424.1 281 77.2
Glyma.20G128700 Glycine max HOM05D005496 ORTHO05D006677 3.8e-116 421.8 259 81.1
Rhsim11G0160100 Rhododendron simsii HOM05D005496 ORTHO05D006677 4.2e-115 418.3 294 73.5
ATR0691G184 Amborella trichopoda HOM05D005496 ORTHO05D006677 7.1e-115 417.5 248 80.2
CARHR105630 Cardamine hirsuta HOM05D005496 ORTHO05D006677 1.6e-114 416.4 225 88.0
arahy.Tifrunner.gnm1.ann1.7NM92S Arachis hypogaea HOM05D005496 ORTHO05D006677 2.1e-114 416.0 256 82.8
BcaC04g23051 Brassica carinata HOM05D005496 ORTHO05D006677 3.5e-114 415.2 226 88.1
arahy.Tifrunner.gnm1.ann1.CE7Z9D Arachis hypogaea HOM05D005496 ORTHO05D006677 6.0e-114 414.5 256 82.4
HanXRQChr10g0292361 Helianthus annuus HOM05D005496 ORTHO05D006677 2.3e-113 412.5 250 80.8
HanXRQChr16g0509221 Helianthus annuus HOM05D005496 ORTHO05D006677 7.4e-112 407.5 250 78.8
A09p10680 Brassica napus HOM05D005496 ORTHO05D006677 9.6e-112 407.1 231 85.7
C09p12670 Brassica napus HOM05D005496 ORTHO05D006677 9.6e-112 407.1 231 85.7
ECA236G0884 Erigeron canadensis HOM05D005496 ORTHO05D006677 2.1e-111 406.0 250 78.8
FAN15G3658 Fragaria x ananassa HOM05D005496 ORTHO05D006677 9.0e-110 400.6 254 80.7
BraA09t36711Z Brassica rapa HOM05D005496 ORTHO05D006677 8.4e-108 394.0 254 78.0
QL11p033686 Quercus lobata HOM05D005496 ORTHO05D006677 6.0e-106 387.9 452 50.7
Duzib052G0798 Durio zibethinus HOM05D005496 ORTHO05D006677 3.9e-105 385.2 253 78.3
Lsat_1_v5_gn_7_86500 Lactuca sativa HOM05D005496 ORTHO05D006677 2.8e-103 379.0 222 81.5
FAN24G2091 Fragaria x ananassa HOM05D005496 ORTHO05D006677 3.7e-103 378.6 254 78.3
Aa31LG8G13100 Aethionema arabicum HOM05D005496 ORTHO05D006677 6.2e-103 377.9 255 76.9
Ciclev10029109m.g Citrus clementina HOM05D005496 ORTHO05D006677 8.2e-103 377.5 208 88.9
Nn5g30423 Nelumbo nucifera HOM05D005496 ORTHO05D006677 1.1e-102 377.1 249 75.5
Gorai.008G022900 Gossypium raimondii HOM05D005496 ORTHO05D006677 6.9e-102 374.4 248 79.0
Os09g0109500 Oryza sativa ssp. japonica HOM05D005496 ORTHO05D006677 1.3e-100 370.2 249 74.7
Sabra16G0188400 Salix brachista HOM05D005496 ORTHO05D006677 2.9e-100 369.0 283 72.1
Pp3c22_1600 Physcomitrium patens HOM05D005496 ORTHO05D006677 3.8e-100 368.6 249 70.3
Gohir.A01G008000 Gossypium hirsutum HOM05D005496 ORTHO05D006677 8.4e-100 367.5 257 76.7
Pp3c21_16720 Physcomitrium patens HOM05D005496 ORTHO05D006677 7.9e-98 360.9 249 69.9
Psat6g219080 Pisum sativum HOM05D005496 ORTHO05D006677 6.7e-97 357.8 211 83.9
Mapoly0001s0126 Marchantia polymorpha HOM05D005496 ORTHO05D006677 2.1e-95 352.8 249 68.7
BcaC06g36040 Brassica carinata HOM05D005496 ORTHO05D006677 4.5e-93 345.1 199 84.4
BcaB03g16270 Brassica carinata HOM05D005496 ORTHO05D006677 3.8e-92 342.0 251 70.9
Hund00151 Selenicereus undatus HOM05D005496 ORTHO05D006677 1.2e-90 337.0 194 84.0
unitig_699.g19872 Utricularia gibba HOM05D005496 ORTHO05D006677 7.9e-90 334.3 208 77.9
AagrBONN_evm.TU.Sc2ySwM_228.4354 Anthoceros agrestis HOM05D005496 ORTHO05D006677 1.3e-89 333.6 236 67.8
SMO358G0568 Selaginella moellendorffii HOM05D005496 ORTHO05D006677 3.0e-89 332.4 249 65.1
Duzib132G0296 Durio zibethinus HOM05D005496 ORTHO05D006677 2.5e-88 329.3 253 69.2
Actinidia00410 Actinidia chinensis HOM05D005496 ORTHO05D006677 6.3e-87 324.7 241 70.1
Zm00001eb307360 Zea mays HOM05D005496 ORTHO05D006677 8.2e-87 324.3 249 69.1
AUR62039077 Chenopodium quinoa HOM05D005496 ORTHO05D006677 1.9e-83 313.2 268 63.4
Lj5C214T6 Lonicera japonica HOM05D005496 ORTHO05D006677 4.6e-82 308.5 206 77.7
CDE02G0272 Ceratophyllum demersum HOM05D005496 ORTHO05D006677 5.1e-81 305.1 249 61.4
vmacro02003 Vaccinium macrocarpon HOM05D005496 ORTHO05D006677 4.1e-78 295.4 336 54.5
Nitab4.5_0002815g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.0e-76 290.8 253 64.8
Actinidia05496 Actinidia chinensis HOM05D005496 ORTHO05D006677 1.3e-76 290.4 270 59.6
PGSC0003DMG401025863 Solanum tuberosum HOM05D005496 ORTHO05D006677 5.0e-76 288.5 210 71.9
EL10Ac9g22275 Beta vulgaris HOM05D005496 ORTHO05D006677 1.2e-74 283.9 161 84.5
SGA_v2.0_scaffold13G06610 Striga asiatica HOM05D005496 ORTHO05D006677 5.2e-73 278.5 161 85.1
Cre06.g250350 Chlamydomonas reinhardtii HOM05D005496 ORTHO05D006677 1.3e-71 273.9 225 56.4
AUR62010309 Chenopodium quinoa HOM05D005496 ORTHO05D006677 7.0e-70 268.1 207 65.7
Sabra09G0073700 Salix brachista HOM05D005496 ORTHO05D006677 2.6e-69 266.2 286 54.9
MCO15G042 Micromonas commoda HOM05D005496 ORTHO05D006677 4.7e-66 255.4 244 50.8
Oeu056146.1 Olea europaea HOM05D005496 ORTHO05D006677 8.0e-66 254.6 173 75.7
PRCOL_00006227 Prasinoderma coloniale HOM05D005496 ORTHO05D006677 5.7e-64 248.4 238 52.9
FAN20G2824 Fragaria x ananassa HOM05D005496 ORTHO05D006677 5.9e-61 238.4 145 84.1
Ah.01g018260 Amaranthus hybridus HOM05D005496 ORTHO05D006677 2.7e-58 229.6 182 65.4
SalBow3G0726 Salvia bowleyana HOM05D005496 ORTHO05D006677 4.7e-58 228.8 206 59.7
HPP92_011625 Vanilla planifolia HOM05D005496 ORTHO05D006677 7.0e-54 214.9 146 71.2
BolC7t41273H Brassica oleracea HOM05D005496 ORTHO05D006677 6.8e-49 198.4 115 84.3
SEGI_40705 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 3.5e-45 186.0 112 77.7
Haze_10172 Corylus avellana HOM05D005496 ORTHO05D006677 5.6e-43 178.7 133 73.7
SEGI_21612 Sequoiadendron giganteum HOM05D005496 ORTHO05D006677 6.0e-37 158.7 91 80.2
CBR_g4069 Chara braunii HOM05D005496 ORTHO05D006677 6.2e-34 148.7 93 76.3
Nitab4.5_0005392g0040 Nicotiana tabacum HOM05D005496 ORTHO05D006677 1.4e-33 147.5 253 42.7
COL.COLO4_32594 Corchorus olitorius HOM05D005496 ORTHO05D006677 5.2e-33 145.6 174 48.9
CBR_g4071 Chara braunii HOM05D000019 ORTHO05D000048 1.0e-28 131.3 102 66.7
HPP92_026155 Vanilla planifolia HOM05D005496 ORTHO05D006677 7.8e-13 78.6 52 73.1


User provided reference genes

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