Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0599 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 0.0e+00 2237.2 1215 100.0
TWI79G0699 Tripterygium wilfordii HOM05D006963 ORTHO05D008783 0.0e+00 1389.8 804 99.3
Thecc.09G298600 Theobroma cacao HOM05D006963 ORTHO05D008783 0.0e+00 1372.1 1226 60.6
Manes.04G012900 Manihot esculenta HOM05D006963 ORTHO05D008783 0.0e+00 1366.3 1221 60.8
QL01p015018 Quercus lobata HOM05D006963 ORTHO05D008783 0.0e+00 1349.7 1184 62.6
Cfa010289 Carpinus fangiana HOM05D006963 ORTHO05D008783 0.0e+00 1349.0 1223 61.6
Prupe.6G112700 Prunus persica HOM05D006963 ORTHO05D008783 0.0e+00 1342.0 1183 61.4
Potri.009G005300 Populus trichocarpa HOM05D006963 ORTHO05D008783 0.0e+00 1339.3 1221 62.7
Haze_23703 Corylus avellana HOM05D006963 ORTHO05D008783 0.0e+00 1338.2 1215 61.5
Gohir.A13G223800 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1331.2 1231 60.4
Gorai.013G259300 Gossypium raimondii HOM05D006963 ORTHO05D008783 0.0e+00 1327.8 1231 60.4
CiPaw.13G122900 Carya illinoinensis HOM05D006963 ORTHO05D008783 0.0e+00 1324.3 1180 61.9
RcHm_v2.0_Chr5g0056861 Rosa chinensis HOM05D006963 ORTHO05D008783 0.0e+00 1313.9 1162 61.0
Duzib168G1517 Durio zibethinus HOM05D006963 ORTHO05D008783 0.0e+00 1300.4 1224 58.5
Atru.chr3.3517 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1295.4 1217 59.9
Gohir.D13G228600 Gossypium hirsutum HOM05D006963 ORTHO05D008783 0.0e+00 1295.4 1231 59.5
Atru.chr3.3511 Acer truncatum HOM05D006963 ORTHO05D008783 0.0e+00 1294.3 1217 59.9
FvH4_3g30640 Fragaria vesca HOM05D006963 ORTHO05D008783 0.0e+00 1288.9 1178 59.9
FAN21G1782 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1286.6 1224 60.1
Ciclev10027698m.g Citrus clementina HOM05D006963 ORTHO05D008783 0.0e+00 1282.7 1222 59.9
Sabra09G0002400 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1276.9 1218 59.9
MD03G1129000 Malus domestica HOM05D006963 ORTHO05D008783 0.0e+00 1270.0 1223 57.9
FAN11G1352 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1267.3 1274 57.7
FAN25G3586 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1265.4 1292 57.4
FAN16G1993 Fragaria x ananassa HOM05D006963 ORTHO05D008783 0.0e+00 1252.3 1171 59.2
COL.COLO4_19194 Corchorus olitorius HOM05D006963 ORTHO05D008783 0.0e+00 1233.8 1148 58.8
Lalb_Chr24g0394941 Lupinus albus HOM05D006963 ORTHO05D008783 0.0e+00 1210.3 1171 57.4
Glyma.13G322000 Glycine max HOM05D006963 ORTHO05D008783 0.0e+00 1202.2 1180 57.0
Sabra04G0147300 Salix brachista HOM05D006963 ORTHO05D008783 0.0e+00 1194.5 1221 58.0
CANSAT64G0534 Cannabis sativa HOM05D006963 ORTHO05D008783 0.0e+00 1188.3 1234 54.8
Phvul.005G130400 Phaseolus vulgaris HOM05D006963 ORTHO05D008783 0.0e+00 1187.6 1179 57.4
Lj3g0023334 Lotus japonicus HOM05D006963 ORTHO05D008783 0.0e+00 1176.8 1173 56.3
VMungo1080G0719 Vigna mungo HOM05D006963 ORTHO05D008783 0.0e+00 1160.6 1179 56.6
Medtr2g084285 Medicago truncatula HOM05D006963 ORTHO05D008783 0.0e+00 1154.8 1172 55.4
Ca_01706_v3 Cicer arietinum L. HOM05D006963 ORTHO05D008783 0.0e+00 1147.1 1165 55.8
arahy.Tifrunner.gnm1.ann1.10EEU4 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1146.3 1170 54.5
Psat5g253040 Pisum sativum HOM05D006963 ORTHO05D008783 0.0e+00 1145.6 1173 55.2
vmacro14391 Vaccinium macrocarpon HOM05D006963 ORTHO05D008783 0.0e+00 1144.0 1233 53.3
arahy.Tifrunner.gnm1.ann1.5C5N68 Arachis hypogaea HOM05D006963 ORTHO05D008783 0.0e+00 1143.3 1170 54.4
Rhsim01G0210700 Rhododendron simsii HOM05D006963 ORTHO05D008783 0.0e+00 1139.4 1225 55.1
MELO3C026954.2 Cucumis melo HOM05D006963 ORTHO05D008783 0.0e+00 1139.0 1235 54.4
Sed0000311 Sechium edule HOM05D006963 ORTHO05D008783 0.0e+00 1138.3 1220 55.2
CsaV3_6G014380 Cucumis sativus L. HOM05D006963 ORTHO05D008783 0.0e+00 1127.9 1234 53.4
Cc01_g10290 Coffea canephora HOM05D006963 ORTHO05D008783 0.0e+00 1109.4 1250 51.7
TAR369G1146 Trochodendron aralioides HOM05D006963 ORTHO05D008783 0.0e+00 1106.7 1186 53.8
ClCG02G021610 Citrullus lanatus HOM05D006963 ORTHO05D008783 0.0e+00 1102.8 1285 52.1
TPR.G21046 Trifolium pratense HOM05D006963 ORTHO05D008783 0.0e+00 1102.4 1191 53.4
Solyc06g074810.3 Solanum lycopersicum HOM05D006963 ORTHO05D008783 0.0e+00 1097.0 1250 50.7
Aqoxy1G01103 Aquilegia oxysepala HOM05D006963 ORTHO05D008783 0.0e+00 1092.0 1183 52.9
PGR119G1224 Punica granatum HOM05D006963 ORTHO05D008783 0.0e+00 1088.6 1227 53.0
PGSC0003DMG400007133 Solanum tuberosum HOM05D006963 ORTHO05D008783 0.0e+00 1088.6 1257 51.1
Sopen06g031250 Solanum pennellii HOM05D006963 ORTHO05D008783 0.0e+00 1087.8 1251 50.7
Eucgr.J00389 Eucalyptus grandis HOM05D006963 ORTHO05D008783 0.0e+00 1087.0 1162 51.7
Aa31LG5G7960 Aethionema arabicum HOM05D006963 ORTHO05D008783 0.0e+00 1078.5 1173 52.4
DCAR_018766 Daucus carota HOM05D006963 ORTHO05D008783 0.0e+00 1077.0 1232 52.1
CSS0000606 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 1.7e-311 1072.8 1087 56.7
Nitab4.5_0003155g0020 Nicotiana tabacum HOM05D006963 ORTHO05D008783 5.5e-306 1054.7 1297 49.3
MBI13_g24960_MAGBIO Magnolia biondii HOM05D006963 ORTHO05D008783 1.3e-299 1033.5 1192 50.6
MSTRG.18703 Avicennia marina HOM05D006963 ORTHO05D008783 6.5e-299 1031.2 1181 50.0
Lj2A1007T38 Lonicera japonica HOM05D006963 ORTHO05D008783 1.7e-294 1016.5 1019 56.8
PSO339G1013 Papaver somniferum HOM05D006963 ORTHO05D008783 1.1e-293 1013.8 1174 50.0
PSO063G0444 Papaver somniferum HOM05D006963 ORTHO05D008783 3.5e-292 1008.8 1179 49.7
Sc06g0010790 Simmondsia chinensis HOM05D006963 ORTHO05D008783 3.8e-291 1005.4 1185 50.5
AL4G21950 Arabidopsis lyrata HOM05D006963 ORTHO05D008783 9.4e-290 1000.7 1228 50.1
GSVIVG01031463001 Vitis vinifera HOM05D006963 ORTHO05D008783 1.9e-282 976.5 1170 47.9
ECA248G2820 Erigeron canadensis HOM05D006963 ORTHO05D008783 2.0e-279 966.5 1166 49.7
Peaxi162Scf00114g00812 Petunia axillaris HOM05D006963 ORTHO05D008783 2.0e-279 966.5 1231 47.0
EL10Ac9g22623 Beta vulgaris HOM05D006963 ORTHO05D008783 1.7e-278 963.4 1247 48.3
Cpa.g.sc1.5 Carica papaya HOM05D006963 ORTHO05D008783 5.6e-274 948.3 1230 48.6
Migut.D02292 Erythranthe guttata HOM05D006963 ORTHO05D008783 4.7e-273 945.3 1176 48.2
Lsat_1_v5_gn_1_64681 Lactuca sativa HOM05D006963 ORTHO05D008783 1.1e-269 934.1 1183 48.0
Ah.01g003350 Amaranthus hybridus HOM05D006963 ORTHO05D008783 4.1e-269 932.2 1192 48.2
Nitab4.5_0001163g0050 Nicotiana tabacum HOM05D006963 ORTHO05D008783 3.5e-268 929.1 1298 44.6
HanXRQChr11g0346501 Helianthus annuus HOM05D006963 ORTHO05D008783 6.0e-268 928.3 1232 48.9
Hund08356 Selenicereus undatus HOM05D006963 ORTHO05D008783 3.9e-267 925.6 1243 47.7
CAN.G1432.10 Capsicum annuum HOM05D006963 ORTHO05D008783 8.6e-259 897.9 1173 47.0
CARHR121070 Cardamine hirsuta HOM05D006963 ORTHO05D008783 1.5e-255 887.1 1069 50.5
SGA_v2.0_scaffold27G11571 Striga asiatica HOM05D006963 ORTHO05D008783 3.9e-251 872.5 1183 44.0
AUR62014974 Chenopodium quinoa HOM05D006963 ORTHO05D008783 1.9e-250 870.2 1118 48.2
AUR62029159 Chenopodium quinoa HOM05D006963 ORTHO05D008783 3.1e-248 862.8 1031 50.5
Dinv16225 Davidia involucrata HOM05D006963 ORTHO05D008783 2.4e-245 853.2 768 61.5
ATR0329G003 Amborella trichopoda HOM05D006963 ORTHO05D008783 1.2e-239 834.3 1248 43.5
Glyma.12G178700 Glycine max HOM05D006963 ORTHO05D008783 3.1e-224 783.1 743 59.5
Os02g0823800 Oryza sativa ssp. japonica HOM05D006963 ORTHO05D008783 1.0e-219 768.1 1174 42.2
Zm00001eb190880 Zea mays HOM05D006963 ORTHO05D008783 1.3e-219 767.7 1168 40.8
Oeu008360.1 Olea europaea HOM05D006963 ORTHO05D008783 2.8e-201 706.8 1058 41.6
HPP92_025769 Vanilla planifolia HOM05D006963 ORTHO05D008783 1.4e-200 704.5 982 43.5
SEGI_09379 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 5.0e-190 669.5 1171 40.2
Cc00_g22940 Coffea canephora HOM05D006963 ORTHO05D008783 2.8e-169 600.5 614 50.5
Mapoly0011s0199 Marchantia polymorpha HOM05D006963 ORTHO05D008783 7.0e-160 569.3 1245 35.3
unitig_899.g15359 Utricularia gibba HOM05D006963 ORTHO05D008783 4.7e-156 556.6 1169 35.7
Pp3c19_6480 Physcomitrium patens HOM05D006963 ORTHO05D008783 4.0e-139 500.4 1233 33.5
AagrBONN_evm.TU.Sc2ySwM_344.4789 Anthoceros agrestis HOM05D006963 ORTHO05D008783 2.4e-136 491.1 1132 36.0
Dinv16223 Davidia involucrata HOM05D006963 ORTHO05D008783 4.0e-115 420.6 384 57.0
CDE04G1589 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 2.8e-108 397.9 612 42.8
Glyma.12G178600 Glycine max HOM05D006963 ORTHO05D008783 2.0e-106 391.7 393 52.7
SEGI_31087 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 6.1e-79 300.4 518 38.8
Actinidia20425 Actinidia chinensis HOM05D006963 ORTHO05D008783 1.1e-72 279.6 440 45.5
CBR_g8254 Chara braunii HOM05D006963 ORTHO05D008783 2.2e-68 265.4 1154 27.0
CDE04G0208 Ceratophyllum demersum HOM05D006963 ORTHO05D008783 9.1e-67 260.0 388 40.5
TAR623G1253 Trochodendron aralioides HOM05D006963 ORTHO05D008783 4.0e-38 164.9 203 49.3
arahy.Tifrunner.gnm1.ann1.WJC7CQ Arachis hypogaea HOM05D006963 ORTHO05D008783 4.9e-36 157.9 262 37.4
arahy.Tifrunner.gnm1.ann1.YZCM4H Arachis hypogaea HOM05D006963 ORTHO05D008783 1.1e-32 146.7 270 35.2
Dinv29380 Davidia involucrata HOM05D006963 ORTHO05D008783 1.6e-31 142.9 180 56.1
Nn2g13854 Nelumbo nucifera HOM05D006963 ORTHO05D008783 6.2e-31 141.0 121 57.9
TAR623G0981 Trochodendron aralioides HOM05D006963 ORTHO05D008783 3.1e-30 138.7 86 70.9
CSS0014134 Camellia sinensis var. sinensis HOM05D006963 ORTHO05D008783 6.0e-26 124.4 177 46.9
MD11G1148100 Malus domestica HOM05D006963 ORTHO05D008783 1.7e-25 122.9 121 63.6
SEGI_19036 Sequoiadendron giganteum HOM05D006963 ORTHO05D008783 1.7e-25 122.9 96 60.4
CAN.G1432.11 Capsicum annuum HOM05D006963 ORTHO05D008783 5.1e-25 121.3 80 67.5
Oeu008361.1 Olea europaea HOM05D006963 ORTHO05D008783 1.2e-23 116.7 149 47.0
Psat0s1214g0160 Pisum sativum HOM05D006963 ORTHO05D008783 1.3e-20 106.7 90 55.6
TAR623G0866 Trochodendron aralioides HOM05D006963 ORTHO05D008783 5.4e-11 74.7 79 44.3
Cre07.g347700 Chlamydomonas reinhardtii HOM05D006963 ORTHO05D141144 4.8e-07 61.6 139 30.2
Pp3c7_26050 Physcomitrium patens HOM05D006963 ORTHO05D008783 4.0e-06 58.5 72 41.7


User provided reference genes

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