Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0544 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 9.1e-85 317.0 177 100.0
TWI31G0692 Tripterygium wilfordii HOM05D005967 ORTHO05D005174 3.7e-62 241.9 178 79.8
Manes.11G131200 Manihot esculenta HOM05D005967 ORTHO05D005174 8.1e-33 144.4 179 49.2
Manes.04G034400 Manihot esculenta HOM05D005967 ORTHO05D005174 3.1e-32 142.5 179 46.9
Duzib170G1125 Durio zibethinus HOM05D005967 ORTHO05D005174 2.4e-29 132.9 179 52.5
Duzib150G1094 Durio zibethinus HOM05D005967 ORTHO05D005174 4.6e-28 128.6 179 46.4
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 2.8e-25 119.4 173 48.0
Potri.009G030200 Populus trichocarpa HOM05D005967 ORTHO05D005174 3.7e-25 119.0 182 43.4
COL.COLO4_18500 Corchorus olitorius HOM05D005967 ORTHO05D005174 2.6e-23 112.8 192 48.4
Duzib168G1635 Durio zibethinus HOM05D005967 ORTHO05D005174 2.6e-23 112.8 182 42.3
Gohir.A07G098000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.0e-22 110.9 181 44.2
Potri.001G239000 Populus trichocarpa HOM05D005967 ORTHO05D005174 2.9e-22 109.4 175 42.9
Thecc.09G322800 Theobroma cacao HOM05D005967 ORTHO05D005174 9.3e-21 104.4 192 41.1
TAR623G0987 Trochodendron aralioides HOM05D005967 ORTHO05D005174 1.2e-20 104.0 176 43.8
Cfa011491 Carpinus fangiana HOM05D005967 ORTHO05D005174 1.6e-20 103.6 180 40.0
Haze_24086 Corylus avellana HOM05D005967 ORTHO05D005174 2.1e-20 103.2 180 40.0
CiPaw.14G068900 Carya illinoinensis HOM05D005967 ORTHO05D005174 3.5e-20 102.4 176 47.2
Gorai.001G110300 Gossypium raimondii HOM05D005967 ORTHO05D005174 7.9e-20 101.3 181 42.0
Gohir.D07G102400 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.0e-19 100.9 188 42.0
CiPaw.13G095300 Carya illinoinensis HOM05D005967 ORTHO05D005174 5.1e-19 98.6 182 46.7
Prupe.6G078900 Prunus persica HOM05D005967 ORTHO05D005174 8.7e-19 97.8 180 41.7
Dinv12413 Davidia involucrata HOM05D005967 ORTHO05D005174 1.5e-18 97.1 170 42.9
Ciclev10029478m.g Citrus clementina HOM05D005967 ORTHO05D005174 5.7e-18 95.1 184 38.0
Nn2g10378 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.1e-16 90.9 95 55.8
MD11G1110400 Malus domestica HOM05D005967 ORTHO05D005174 3.1e-16 89.4 191 41.9
Sabra16G0144100 Salix brachista HOM05D005967 ORTHO05D005174 3.1e-16 89.4 173 39.3
Gohir.A03G037600 Gossypium hirsutum HOM05D005967 ORTHO05D005174 5.3e-16 88.6 172 41.3
Nn5g26925 Nelumbo nucifera HOM05D005967 ORTHO05D005174 1.2e-15 87.4 165 46.1
CSS0030599 Camellia sinensis var. sinensis HOM05D003527 ORTHO05D004099 4.5e-15 85.5 164 38.4
Sabra09G0021100 Salix brachista HOM05D005967 ORTHO05D005174 4.5e-15 85.5 176 43.2
MD03G1095400 Malus domestica HOM05D005967 ORTHO05D005174 7.6e-15 84.7 192 39.1
TAR636G2062 Trochodendron aralioides HOM05D000645 ORTHO05D000494 7.6e-15 84.7 167 43.1
Gohir.D03G126300 Gossypium hirsutum HOM05D005967 ORTHO05D005174 1.3e-14 84.0 166 49.4
Gorai.003G132600 Gossypium raimondii HOM05D005967 ORTHO05D005174 1.3e-14 84.0 166 39.8
Glyma.15G038800 Glycine max HOM05D005967 ORTHO05D005174 3.8e-14 82.4 188 41.5
Atru.chr3.3892 Acer truncatum HOM05D005967 ORTHO05D005174 6.5e-14 81.6 124 43.5
Aqoxy2G02105 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 6.5e-14 81.6 109 47.7
Duzib106G1613 Durio zibethinus HOM05D005967 ORTHO05D005174 6.5e-14 81.6 182 36.3
Hma1.2p1_1513F.1_g288050 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 1.1e-13 80.9 182 34.6
Dinv37179 Davidia involucrata HOM05D005967 ORTHO05D005174 1.9e-13 80.1 175 36.6
QL07p048152 Quercus lobata HOM05D005967 ORTHO05D005174 1.9e-13 80.1 83 55.4
CSS0050430 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 5.5e-13 78.6 163 38.7
Gorai.002G258000 Gossypium raimondii HOM05D005967 ORTHO05D005174 5.5e-13 78.6 96 49.0
CANSAT54G2543 Cannabis sativa HOM05D005967 ORTHO05D005174 1.2e-12 77.4 125 43.2
Dinv16991 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-12 77.0 95 52.6
Dinv42940 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-12 77.0 95 52.6
Dinv43160 Davidia involucrata HOM05D005967 ORTHO05D005174 1.6e-12 77.0 95 52.6
Manes.09G089000 Manihot esculenta HOM05D005967 ORTHO05D005174 2.1e-12 76.6 87 54.0
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 3.5e-12 75.9 92 54.3
FAN16G3022 Fragaria x ananassa HOM05D005967 ORTHO05D005174 3.5e-12 75.9 103 51.5
FAN21G3710 Fragaria x ananassa HOM05D005967 ORTHO05D005174 3.5e-12 75.9 103 51.5
Glyma.13G335500 Glycine max HOM05D005967 ORTHO05D005174 4.6e-12 75.5 78 50.0
FvH4_3g35950 Fragaria vesca HOM05D005967 ORTHO05D005174 6.1e-12 75.1 183 36.6
FAN11G1916 Fragaria x ananassa HOM05D005967 ORTHO05D005174 6.1e-12 75.1 183 36.6
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.0e-11 74.3 79 55.7
Oeu019207.1 Olea europaea HOM05D005967 ORTHO05D005174 1.0e-11 74.3 95 45.3
Gohir.D01G212200 Gossypium hirsutum HOM05D005967 ORTHO05D005174 3.9e-11 72.4 96 46.9
FAN25G3118 Fragaria x ananassa HOM05D005967 ORTHO05D005174 5.1e-11 72.0 183 36.6
Eucgr.A01260 Eucalyptus grandis HOM05D005967 ORTHO05D005174 6.7e-11 71.6 182 34.1
Hma1.2p1_1829F.1_g304460 Hydrangea macrophylla HOM05D005967 ORTHO05D005174 6.7e-11 71.6 100 47.0
Oeu036150.1 Olea europaea HOM05D005967 ORTHO05D005174 6.7e-11 71.6 82 56.1
Oeu036152.1 Olea europaea HOM05D005967 ORTHO05D005174 6.7e-11 71.6 82 56.1
RcHm_v2.0_Chr5g0064301 Rosa chinensis HOM05D005967 ORTHO05D005174 6.7e-11 71.6 97 50.5
DCAR_005325 Daucus carota HOM05D005967 ORTHO05D005174 1.1e-10 70.9 103 44.7
Thecc.05G040600 Theobroma cacao HOM05D005967 ORTHO05D005174 1.1e-10 70.9 174 35.1
Potri.006G084700 Populus trichocarpa HOM05D005967 ORTHO05D005174 1.5e-10 70.5 172 35.5
ClCG03G001590 Citrullus lanatus HOM05D005967 ORTHO05D005174 2.5e-10 69.7 72 54.2
Gohir.A01G222700 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.5e-10 69.7 79 46.8
CsaV3_1G034090 Cucumis sativus L. HOM05D005967 ORTHO05D005174 3.3e-10 69.3 87 50.6
Oeu054156.1 Olea europaea HOM05D005967 ORTHO05D005174 5.7e-10 68.6 95 44.2
Sed0015612 Sechium edule HOM05D005967 ORTHO05D005174 5.7e-10 68.6 79 54.4
Duzib093G0486 Durio zibethinus HOM05D005967 ORTHO05D005174 7.4e-10 68.2 158 39.9
Peaxi162Scf00679g00042 Petunia axillaris HOM05D005967 ORTHO05D014046 7.4e-10 68.2 75 46.7
MELO3C020645.2 Cucumis melo HOM05D005967 ORTHO05D005174 9.7e-10 67.8 109 40.4
VMungo1080G1048 Vigna mungo HOM05D005967 ORTHO05D005174 1.3e-09 67.4 184 35.9
VMungo1309G2816 Vigna mungo HOM05D005967 ORTHO05D005174 1.6e-09 67.0 77 42.9
Actinidia23945 Actinidia chinensis HOM05D005967 ORTHO05D005174 2.2e-09 66.6 68 52.9
Migut.N02671 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.2e-09 66.6 100 48.0
Oeu007791.1 Olea europaea HOM05D005967 ORTHO05D005174 2.2e-09 66.6 79 50.6
DCAR_005974 Daucus carota HOM05D005967 ORTHO05D005174 2.8e-09 66.2 96 41.7
Migut.J00334 Erythranthe guttata HOM05D005967 ORTHO05D005174 2.8e-09 66.2 87 48.3
Eucgr.B02374 Eucalyptus grandis HOM05D005967 ORTHO05D005174 4.8e-09 65.5 111 42.3
Lalb_Chr03g0026661 Lupinus albus HOM05D005967 ORTHO05D005174 4.8e-09 65.5 154 33.8
MSTRG.5669 Avicennia marina HOM05D005967 ORTHO05D005174 8.2e-09 64.7 105 43.8
Ca_28209_v3 Cicer arietinum L. HOM05D005967 ORTHO05D005174 8.2e-09 64.7 81 48.1
Gohir.D04G121000 Gossypium hirsutum HOM05D005967 ORTHO05D005174 2.4e-08 63.2 76 48.7
Gorai.012G103600 Gossypium raimondii HOM05D005967 ORTHO05D005174 2.4e-08 63.2 76 48.7
Sabra06G0064300 Salix brachista HOM05D000729 ORTHO05D001063 2.4e-08 63.2 172 31.4
Cfa017389 Carpinus fangiana HOM05D005967 ORTHO05D005174 3.1e-08 62.8 80 47.5
Medtr4g063885 Medicago truncatula HOM05D005967 ORTHO05D005174 3.1e-08 62.8 87 49.4
Nitab4.5_0004094g0010 Nicotiana tabacum HOM05D005967 ORTHO05D005174 3.1e-08 62.8 90 42.2
Cpa.g.sc81.161 Carica papaya HOM05D005967 ORTHO05D005174 4.1e-08 62.4 202 33.2
Oeu024352.1 Olea europaea HOM05D005967 ORTHO05D005174 5.3e-08 62.0 67 56.7
Phvul.L004943 Phaseolus vulgaris HOM05D005967 ORTHO05D005174 5.3e-08 62.0 59 47.5
CiPaw.09G192100 Carya illinoinensis HOM05D005967 ORTHO05D005174 9.0e-08 61.2 86 44.2
Lj3g0014047 Lotus japonicus HOM05D005967 ORTHO05D005174 9.0e-08 61.2 73 46.6
EL10As1g23034 Beta vulgaris HOM05D005967 ORTHO05D005174 1.2e-07 60.8 88 48.9
DCAR_020849 Daucus carota HOM05D005967 ORTHO05D005174 1.5e-07 60.5 97 43.3
Lj3g0001714 Lotus japonicus HOM05D005967 ORTHO05D005174 1.5e-07 60.5 78 51.3
Rhsim05G0192000 Rhododendron simsii HOM05D005967 ORTHO05D005174 1.5e-07 60.5 99 40.4
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 4.5e-07 58.9 76 43.4
ClCG04G008210 Citrullus lanatus HOM05D023073 ORTHO05D005174 5.9e-07 58.5 85 40.0
Sc01g0004310 Simmondsia chinensis HOM05D005967 ORTHO05D005174 5.9e-07 58.5 82 42.7
CSS0050426 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 7.7e-07 58.2 109 44.0
Oeu011403.1 Olea europaea HOM05D005967 ORTHO05D005174 1.0e-06 57.8 81 50.6
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.3e-06 57.4 98 39.8
Oeu038352.1 Olea europaea HOM05D005967 ORTHO05D005174 1.7e-06 57.0 78 47.4
Psat7g217000 Pisum sativum HOM05D005967 ORTHO05D005174 2.9e-06 56.2 77 48.1
CSS0006279 Camellia sinensis var. sinensis HOM05D005967 ORTHO05D005174 3.8e-06 55.8 65 44.6
Carub.0004s0986 Capsella rubella HOM05D010012 ORTHO05D012171 3.8e-06 55.8 73 43.8
Lalb_Chr01g0003691 Lupinus albus HOM05D005967 ORTHO05D005174 3.8e-06 55.8 77 46.8
Peaxi162Scf00832g00006 Petunia axillaris HOM05D030065 ORTHO05D005174 3.8e-06 55.8 84 46.4
MSTRG.19086 Avicennia marina HOM05D005967 ORTHO05D005174 5.0e-06 55.5 74 45.9
FAN05G2792 Fragaria x ananassa HOM05D018126 ORTHO05D020711 5.0e-06 55.5 91 41.8
FAN09G0198 Fragaria x ananassa HOM05D018126 ORTHO05D020711 5.0e-06 55.5 91 41.8
Lsat_1_v5_gn_9_23241 Lactuca sativa HOM05D030279 ORTHO05D029282 5.0e-06 55.5 83 43.4
Atru.chr8.1967 Acer truncatum HOM05D005967 ORTHO05D005174 6.5e-06 55.1 93 43.0
MELO3C003127.2 Cucumis melo HOM05D023073 ORTHO05D005174 6.5e-06 55.1 84 36.9


User provided reference genes

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