Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.0e-57 226.5 114 100.0
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 9.6e-19 97.1 75 65.3
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 1.6e-18 96.3 78 62.8
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.1e-18 95.9 115 47.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.2e-18 94.4 81 61.7
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 6.2e-18 94.4 81 61.7
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 5.3e-17 91.3 115 47.8
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 5.8e-16 87.8 78 59.0
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 1.3e-15 86.7 124 45.2
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.3e-15 86.7 110 45.5
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 6.4e-15 84.3 113 47.8
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.1e-14 83.6 83 54.2
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.1e-14 83.6 97 47.4
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.9e-14 82.8 78 55.1
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 4.2e-14 81.6 96 46.9
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.4e-14 81.3 79 55.7
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 5.4e-14 81.3 79 57.0
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.6e-13 79.7 79 54.4
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.5e-13 78.6 93 48.4
Atru.chr3.3495 Acer truncatum HOM05D005304 ORTHO05D004438 6.0e-13 77.8 116 46.6
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 2.3e-12 75.9 103 45.6
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.0e-12 75.5 79 55.7
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 8.7e-12 73.9 79 51.9
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.1e-11 73.6 75 50.7
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.9e-11 72.8 95 42.1
FAN11G2118 Fragaria x ananassa HOM05D025255 ORTHO05D004438 4.3e-11 71.6 79 48.1
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 4.3e-11 71.6 91 42.9
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 9.6e-11 70.5 65 50.8
FAN16G1536 Fragaria x ananassa HOM05D025255 ORTHO05D004438 1.3e-10 70.1 79 48.1
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.1e-10 69.3 108 41.7
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 2.8e-10 68.9 75 46.7
FvH4_3g30440 Fragaria vesca HOM05D025255 ORTHO05D004438 2.8e-10 68.9 65 53.8
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.8e-10 68.9 72 45.8
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 3.6e-10 68.6 57 54.4
FAN21G1648 Fragaria x ananassa HOM05D025255 ORTHO05D004438 3.6e-10 68.6 65 52.3
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 4.8e-10 68.2 70 50.0
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 4.8e-10 68.2 81 37.0
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 8.1e-10 67.4 77 49.4
PGR102G2181 Punica granatum HOM05D005304 ORTHO05D004438 8.1e-10 67.4 118 37.3
Potri.001G212300 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.1e-09 67.0 153 38.6
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.4e-09 66.6 78 42.3
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.8e-09 66.2 81 38.3
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 1.8e-09 66.2 79 46.8
ClCG01G013950 Citrullus lanatus HOM05D026992 ORTHO05D004438 3.1e-09 65.5 87 43.7
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.1e-09 65.5 86 33.7
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 3.1e-09 65.5 76 46.1
MELO3C035553.2 Cucumis melo HOM05D026992 ORTHO05D004438 4.0e-09 65.1 75 48.0
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 5.3e-09 64.7 72 47.2
Oeu026982.1 Olea europaea HOM05D047474 ORTHO05D004438 9.0e-09 63.9 109 37.6
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 9.0e-09 63.9 78 41.0
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 9.0e-09 63.9 54 51.9
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.2e-08 63.5 96 39.6
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 1.2e-08 63.5 88 33.0
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 2.0e-08 62.8 76 50.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 2.6e-08 62.4 76 43.4
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.5e-08 61.6 109 35.8
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 4.5e-08 61.6 97 32.0
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 4.5e-08 61.6 114 41.2
CsaV3_1G014250 Cucumis sativus L. HOM05D026992 ORTHO05D004438 5.8e-08 61.2 82 43.9
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 5.8e-08 61.2 95 37.9
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 7.6e-08 60.8 86 37.2
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 9.9e-08 60.5 79 41.8
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 9.9e-08 60.5 64 45.3
Oeu026980.1 Olea europaea HOM05D047474 ORTHO05D004438 1.3e-07 60.1 109 36.7
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.7e-07 59.7 58 50.0
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 2.2e-07 59.3 65 52.3
Eucgr.J01032 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.2e-07 59.3 74 40.5
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 2.9e-07 58.9 89 38.2
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 2.9e-07 58.9 74 43.2
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.9e-07 58.9 63 50.8
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 4.9e-07 58.2 83 39.8
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 6.4e-07 57.8 91 42.9
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 6.4e-07 57.8 58 46.6
Sopen06g031160 Solanum pennellii HOM05D005304 ORTHO05D004438 6.4e-07 57.8 73 43.8
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 8.4e-07 57.4 72 43.1
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 8.4e-07 57.4 98 39.8
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.1e-06 57.0 75 49.3
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 1.4e-06 56.6 77 44.2
Haze_23519 Corylus avellana HOM05D005304 ORTHO05D004438 1.4e-06 56.6 119 33.6
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.9e-06 56.2 90 37.8
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 1.9e-06 56.2 88 43.2
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.9e-06 56.2 105 35.2
Sed0018639 Sechium edule HOM05D026992 ORTHO05D004438 1.9e-06 56.2 83 41.0
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 1.9e-06 56.2 92 40.2
Cfa010131 Carpinus fangiana HOM05D005304 ORTHO05D004438 2.4e-06 55.8 118 33.9
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 2.4e-06 55.8 57 47.4
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 2.4e-06 55.8 89 38.2
Sabra08G0019700 Salix brachista HOM05D005304 ORTHO05D004438 3.2e-06 55.5 80 37.5
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 3.2e-06 55.5 59 49.2
C08p03530 Brassica napus HOM05D010843 ORTHO05D012975 4.2e-06 55.1 82 42.7
BolC8t47157H Brassica oleracea HOM05D010843 ORTHO05D012975 4.2e-06 55.1 82 42.7
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 4.2e-06 55.1 88 35.2
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.2e-06 55.1 90 41.1
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.2e-06 55.1 59 47.5
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 4.2e-06 55.1 54 50.0
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 4.2e-06 55.1 93 35.5
BraA08t35439Z Brassica rapa HOM05D010843 ORTHO05D012975 5.5e-06 54.7 82 43.9
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 5.5e-06 54.7 106 32.1
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 5.5e-06 54.7 59 47.5
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.5e-06 54.7 59 47.5
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 5.5e-06 54.7 74 41.9
A08p35300 Brassica napus HOM05D010843 ORTHO05D012975 7.1e-06 54.3 82 43.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 7.1e-06 54.3 80 41.2
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 7.1e-06 54.3 102 35.3
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 7.1e-06 54.3 66 43.9
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.1e-06 54.3 90 41.1
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 7.1e-06 54.3 57 47.4
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 9.3e-06 53.9 60 41.7
Lalb_Chr03g0027791 Lupinus albus HOM05D014522 ORTHO05D004438 9.3e-06 53.9 71 45.1


User provided reference genes

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