Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 9.0e-84 313.5 157 100.0
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.2e-67 260.0 154 85.7
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 5.0e-50 201.4 142 70.4
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.9e-49 199.5 158 64.6
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 2.5e-49 199.1 159 64.8
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 2.5e-49 199.1 158 60.8
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 5.5e-49 198.0 155 63.9
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 1.2e-48 196.8 158 59.5
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 1.6e-48 196.4 158 63.9
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 2.7e-48 195.7 157 63.1
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 4.6e-48 194.9 158 59.5
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 1.4e-47 193.4 160 59.4
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 1.4e-47 193.4 157 64.3
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 1.8e-47 193.0 158 60.1
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 3.9e-47 191.8 158 58.9
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 6.7e-47 191.0 160 62.5
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 6.7e-47 191.0 159 61.6
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 8.8e-47 190.7 157 62.4
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 8.8e-47 190.7 158 63.9
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-46 189.9 160 61.9
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.5e-46 189.9 148 67.6
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 1.5e-46 189.9 159 63.5
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 2.0e-46 189.5 160 61.2
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 2.6e-46 189.1 160 61.2
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 2.6e-46 189.1 160 61.2
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 4.4e-46 188.3 158 61.4
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 4.4e-46 188.3 157 63.1
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 5.7e-46 188.0 162 63.6
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 5.7e-46 188.0 137 66.4
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 2.8e-45 185.7 160 61.2
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 3.7e-45 185.3 158 57.0
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 4.8e-45 184.9 137 66.4
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 4.8e-45 184.9 160 61.9
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 6.3e-45 184.5 157 60.5
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 1.1e-44 183.7 163 57.7
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 1.8e-44 183.0 130 66.2
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 2.4e-44 182.6 137 65.7
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 2.4e-44 182.6 157 59.9
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.1e-44 182.2 138 62.3
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 3.1e-44 182.2 135 68.1
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 4.1e-44 181.8 151 60.9
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 4.1e-44 181.8 152 62.5
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 1.2e-43 180.3 137 65.7
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 1.2e-43 180.3 159 60.4
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 1.5e-43 179.9 157 58.6
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 2.0e-43 179.5 158 57.6
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 5.9e-43 177.9 146 64.4
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 7.7e-43 177.6 164 58.5
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 7.7e-43 177.6 164 58.5
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 7.7e-43 177.6 164 58.5
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.0e-42 177.2 160 55.6
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 1.0e-42 177.2 142 65.5
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 2.2e-42 176.0 158 63.3
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 2.2e-42 176.0 159 61.0
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 2.2e-42 176.0 156 57.7
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 2.9e-42 175.6 119 73.9
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 3.8e-42 175.3 120 71.7
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 5.0e-42 174.9 157 59.2
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 5.0e-42 174.9 141 61.0
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 1.1e-41 173.7 154 63.0
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 3.2e-41 172.2 142 61.3
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 4.2e-41 171.8 160 57.5
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 5.5e-41 171.4 161 56.5
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 5.5e-41 171.4 136 64.0
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 1.2e-40 170.2 145 58.6
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 2.1e-40 169.5 159 55.3
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 4.7e-40 168.3 102 75.5
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 4.7e-40 168.3 145 59.3
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 6.1e-40 167.9 139 62.6
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 7.9e-40 167.5 158 57.0
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 1.0e-39 167.2 159 56.6
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 1.0e-39 167.2 150 58.0
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 1.0e-39 167.2 157 53.5
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 1.0e-39 167.2 157 60.5
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 1.4e-39 166.8 145 60.0
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 1.4e-39 166.8 153 58.2
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 1.8e-39 166.4 160 51.9
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 3.0e-39 165.6 160 58.8
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 3.0e-39 165.6 158 55.7
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 6.7e-39 164.5 154 57.8
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 1.1e-38 163.7 157 54.8
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.3e-38 162.2 166 50.6
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 3.3e-38 162.2 141 56.0
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 3.3e-38 162.2 100 74.0
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 3.3e-38 162.2 149 56.4
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 3.3e-38 162.2 133 61.7
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 4.4e-38 161.8 144 54.9
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 4.4e-38 161.8 142 56.3
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 5.7e-38 161.4 157 56.7
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 7.4e-38 161.0 102 74.5
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 7.4e-38 161.0 98 77.6
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 7.4e-38 161.0 137 59.9
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 9.7e-38 160.6 159 54.7
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 1.7e-37 159.8 103 75.7
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 2.8e-37 159.1 104 70.2
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 4.8e-37 158.3 101 71.3
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 6.3e-37 157.9 157 53.5
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 8.2e-37 157.5 118 66.1
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.4e-36 156.8 163 54.0
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 1.4e-36 156.8 157 54.8
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.8e-36 156.4 163 54.0
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 1.8e-36 156.4 93 73.1
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 5.3e-36 154.8 155 54.2
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 1.2e-35 153.7 73 90.4
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 2.0e-35 152.9 155 54.2
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 2.6e-35 152.5 160 53.1
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 4.5e-35 151.8 168 53.0
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 1.3e-34 150.2 120 64.2
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 2.2e-34 149.4 160 51.9
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 3.8e-34 148.7 156 52.6
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 1.9e-33 146.4 171 50.3
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 2.5e-33 146.0 158 55.7
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 7.2e-33 144.4 156 53.2
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 2.1e-32 142.9 133 56.4
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 2.1e-32 142.9 135 57.8
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 3.3e-30 135.6 112 57.1
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 1.7e-29 133.3 89 67.4
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 9.1e-28 127.5 92 68.5
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 1.6e-27 126.7 178 41.6
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 7.7e-27 124.4 140 46.4
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 6.5e-26 121.3 111 59.5
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 8.5e-26 120.9 106 58.5
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 3.2e-25 119.0 112 57.1
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 3.6e-24 115.5 52 94.2
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 1.4e-23 113.6 85 65.9
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 5.2e-23 111.7 94 62.8
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 8.8e-23 110.9 88 61.4
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 3.7e-21 105.5 126 49.2
COL.COLO4_19070 Corchorus olitorius HOM05D005372 ORTHO05D006593 1.1e-20 104.0 159 42.8
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 1.4e-20 103.6 77 57.1
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 3.8e-18 95.5 77 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 5.0e-18 95.1 110 43.6
BraA10t43707Z Brassica rapa HOM05D005372 ORTHO05D006593 6.5e-18 94.7 89 60.7
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 3.4e-14 82.4 97 51.5
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 1.3e-13 80.5 80 47.5
vmacro03009 Vaccinium macrocarpon HOM05D005372 ORTHO05D006593 4.9e-13 78.6 71 56.3
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 3.1e-12 75.9 85 52.9
Dinv20930 Davidia involucrata HOM05D005372 ORTHO05D006593 1.3e-10 70.5 46 65.2
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 2.3e-10 69.7 87 40.2
Dinv21014 Davidia involucrata HOM05D005372 ORTHO05D006593 2.9e-10 69.3 45 66.7
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 2.5e-09 66.2 41 68.3
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 1.2e-08 63.9 49 59.2


User provided reference genes

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