Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 1.2e-86 323.2 173 100.0
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 8.1e-70 267.3 173 80.3
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 1.4e-69 266.5 173 81.5
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 3.1e-69 265.4 173 80.3
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 3.1e-69 265.4 173 80.3
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 5.3e-69 264.6 173 80.3
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 5.3e-69 264.6 173 79.8
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 6.9e-69 264.2 173 80.3
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 9.0e-69 263.8 173 79.2
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 9.0e-69 263.8 173 79.2
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.5e-68 263.1 173 80.9
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 2.0e-68 262.7 173 80.3
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 4.5e-68 261.5 173 79.2
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 7.6e-68 260.8 173 79.2
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 7.6e-68 260.8 173 79.8
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 7.6e-68 260.8 172 80.2
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.3e-67 260.0 173 79.2
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 2.9e-67 258.8 173 78.6
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 4.9e-67 258.1 173 76.9
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 8.4e-67 257.3 175 78.3
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 1.9e-66 256.1 167 79.6
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 3.2e-66 255.4 173 77.5
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 4.2e-66 255.0 173 75.7
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 5.4e-66 254.6 173 76.9
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 1.6e-65 253.1 175 75.4
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 2.7e-65 252.3 174 76.4
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 6.0e-65 251.1 173 77.5
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 6.0e-65 251.1 173 74.6
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 6.0e-65 251.1 175 74.3
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 6.0e-65 251.1 175 74.3
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 6.0e-65 251.1 173 76.9
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 7.9e-65 250.8 173 75.7
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 7.9e-65 250.8 173 76.9
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 1.0e-64 250.4 173 75.7
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 3.0e-64 248.8 173 75.1
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 5.1e-64 248.1 173 75.1
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 5.1e-64 248.1 173 76.9
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 6.7e-64 247.7 173 75.7
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 6.7e-64 247.7 173 75.7
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 8.7e-64 247.3 173 75.7
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 8.7e-64 247.3 173 75.7
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 8.7e-64 247.3 176 74.4
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 1.5e-63 246.5 167 75.4
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.5e-63 246.5 173 75.1
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 1.9e-63 246.1 173 74.0
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.5e-63 245.7 181 71.8
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 4.3e-63 245.0 173 73.4
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 4.3e-63 245.0 174 74.7
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.6e-63 244.6 167 77.2
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 5.6e-63 244.6 167 77.2
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 5.6e-63 244.6 173 75.1
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.3e-62 243.4 173 74.0
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.3e-62 243.4 173 73.4
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.6e-62 243.0 173 73.4
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 2.1e-62 242.7 173 74.0
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 8.1e-62 240.7 167 74.3
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 1.1e-61 240.4 173 74.6
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 1.1e-61 240.4 182 72.0
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 1.5e-60 236.5 194 67.5
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 3.8e-59 231.9 173 71.7
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 4.9e-59 231.5 173 71.1
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 6.5e-59 231.1 173 71.7
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 8.4e-59 230.7 173 72.3
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 8.4e-59 230.7 173 71.1
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 1.4e-58 229.9 173 71.1
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 1.4e-58 229.9 173 71.7
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 3.2e-58 228.8 173 71.1
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 70.5
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 7.1e-58 227.6 173 69.9
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 9.3e-58 227.3 173 68.8
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 1.2e-57 226.9 150 77.3
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 1.2e-57 226.9 168 71.4
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 1.6e-57 226.5 144 80.6
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 1.6e-57 226.5 149 79.9
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 4.6e-57 224.9 173 69.9
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 6.0e-57 224.6 150 78.7
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 1.0e-56 223.8 173 70.5
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 1.1e-55 220.3 144 78.5
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.5e-55 219.9 149 77.2
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 1.3e-54 216.9 173 69.9
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 6.2e-54 214.5 144 77.8
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 1.4e-53 213.4 144 78.5
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 4.5e-52 208.4 145 75.2
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 3.8e-51 205.3 143 76.9
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 3.2e-50 202.2 144 72.2
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.2e-50 202.2 173 63.6
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 4.2e-50 201.8 150 72.0
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 7.1e-50 201.1 165 59.4
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.2e-49 200.3 173 63.0
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 2.7e-49 199.1 165 62.4
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 3.0e-48 195.7 165 63.0
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 2.5e-47 192.6 144 71.5
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 2.5e-47 192.6 173 63.6
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.1e-45 187.2 165 57.6
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.6e-44 182.6 173 60.7
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 1.9e-42 176.4 170 55.3
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 1.9e-42 176.4 127 71.7
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 3.6e-41 172.2 144 66.0
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 1.3e-38 163.7 111 74.8
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.2e-35 152.9 139 67.6
SEGI_00233 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 3.8e-35 152.1 108 73.1
BolC1t00422H Brassica oleracea HOM05D006253 ORTHO05D007666 4.2e-34 148.7 116 70.7
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 2.7e-33 146.0 123 64.2
MD10G1094500 Malus domestica HOM05D006253 ORTHO05D007666 3.0e-32 142.5 101 73.3
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 5.3e-29 131.7 89 75.3
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 2.6e-28 129.4 99 69.7
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 8.5e-27 124.4 120 59.2
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 1.9e-26 123.2 115 57.4
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 1.9e-26 123.2 104 62.5
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 1.2e-25 120.6 86 72.1
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 6.1e-25 118.2 161 47.8
A03p62890 Brassica napus HOM05D000211 ORTHO05D007666 1.4e-24 117.1 95 66.3
MCO10G211 Micromonas commoda HOM05D006253 ORTHO05D007666 1.4e-24 117.1 159 42.1
Cre01.g030950 Chlamydomonas reinhardtii HOM05D006253 ORTHO05D007666 1.8e-24 116.7 170 40.6
Gorai.005G238200 Gossypium raimondii HOM05D006253 ORTHO05D007666 6.7e-24 114.8 105 61.9
PRCOL_00001305 Prasinoderma coloniale HOM05D006253 ORTHO05D007666 1.3e-22 110.5 182 40.7
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.1e-21 107.5 95 62.1
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 2.2e-19 99.8 86 67.4
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 1.5e-18 97.1 71 70.4
Gohir.D02G210201 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.6e-17 93.6 105 55.2
ClCG05G009990 Citrullus lanatus HOM05D006253 ORTHO05D007666 8.0e-17 91.3 116 49.1
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 5.7e-15 85.1 58 74.1
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 6.3e-14 81.6 59 67.8
Oeu025576.2 Olea europaea HOM05D006253 ORTHO05D007666 1.2e-12 77.4 63 66.7
Prupe.4G259300 Prunus persica HOM05D006253 ORTHO05D007666 2.7e-12 76.3 86 51.2
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.3e-11 73.9 57 61.4
Prupe.2G172700 Prunus persica HOM05D006253 ORTHO05D007666 5.0e-11 72.0 51 70.6
SEGI_00525 Sequoiadendron giganteum HOM05D006253 ORTHO05D007666 5.5e-10 68.6 58 58.6
Migut.N01189 Erythranthe guttata HOM05D006253 ORTHO05D007666 7.2e-10 68.2 47 72.3
BolC1t00423H Brassica oleracea HOM05D000123 ORTHO05D009958 2.2e-06 56.6 40 70.0


User provided reference genes

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