Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI79G0087 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 2.8e-118 428.7 227 100.0
TWI75G0877 Tripterygium wilfordii HOM05D005119 ORTHO05D006338 1.5e-108 396.4 231 92.6
GSVIVG01037452001 Vitis vinifera HOM05D005119 ORTHO05D006338 1.1e-106 390.2 229 89.5
CSS0022741 Camellia sinensis var. sinensis HOM05D005119 ORTHO05D006338 2.7e-105 385.6 230 89.6
FAN21G1454 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.0e-104 383.6 229 88.6
FAN21G3401 Fragaria x ananassa HOM05D005119 ORTHO05D006338 1.7e-104 382.9 229 88.2
Atru.chr3.2860 Acer truncatum HOM05D005119 ORTHO05D006338 3.9e-104 381.7 227 89.4
Ciclev10016530m.g Citrus clementina HOM05D005119 ORTHO05D006338 3.9e-104 381.7 231 88.7
Prupe.6G153600 Prunus persica HOM05D005119 ORTHO05D006338 3.9e-104 381.7 227 87.2
RcHm_v2.0_Chr5g0049761 Rosa chinensis HOM05D005119 ORTHO05D006338 3.9e-104 381.7 226 88.1
FAN16G2078 Fragaria x ananassa HOM05D005119 ORTHO05D006338 6.6e-104 380.9 227 88.1
Dinv05232 Davidia involucrata HOM05D005119 ORTHO05D006338 8.6e-104 380.6 227 88.5
Dinv25746 Davidia involucrata HOM05D005119 ORTHO05D006338 8.6e-104 380.6 227 89.4
C09p55010 Brassica napus HOM05D005119 ORTHO05D006338 1.9e-103 379.4 227 87.2
PGR102G2321 Punica granatum HOM05D005119 ORTHO05D006338 1.9e-103 379.4 227 87.7
Duzib170G0448 Durio zibethinus HOM05D005119 ORTHO05D006338 2.5e-103 379.0 227 88.1
Oeu026660.1 Olea europaea HOM05D005119 ORTHO05D006338 3.3e-103 378.6 227 87.2
BcaB05g22789 Brassica carinata HOM05D005119 ORTHO05D006338 5.6e-103 377.9 227 87.2
Sopen11g029200 Solanum pennellii HOM05D005119 ORTHO05D006338 7.3e-103 377.5 228 87.7
PGSC0003DMG400018703 Solanum tuberosum HOM05D005119 ORTHO05D006338 7.3e-103 377.5 228 87.7
THA.LOC104810964 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 9.6e-103 377.1 228 87.7
BolC9t58364H Brassica oleracea HOM05D005119 ORTHO05D006338 1.2e-102 376.7 227 86.8
Eucgr.B03785 Eucalyptus grandis HOM05D005119 ORTHO05D006338 1.2e-102 376.7 226 88.5
Gohir.D08G008500 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.2e-102 376.7 227 88.1
Gorai.004G001700 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.2e-102 376.7 227 88.1
Thhalv10014597m.g Eutrema salsugineum HOM05D005119 ORTHO05D006338 1.6e-102 376.3 227 87.7
Rhsim13G0201000 Rhododendron simsii HOM05D005119 ORTHO05D006338 1.6e-102 376.3 232 86.6
A10p19000 Brassica napus HOM05D005119 ORTHO05D006338 2.1e-102 375.9 227 86.3
BraA10t43978Z Brassica rapa HOM05D005119 ORTHO05D006338 2.1e-102 375.9 227 86.3
Carub.0006s1937 Capsella rubella HOM05D005119 ORTHO05D006338 2.1e-102 375.9 227 87.7
Hma1.2p1_0218F.1_g092630 Hydrangea macrophylla HOM05D005119 ORTHO05D006338 2.1e-102 375.9 232 87.1
Thecc.09G337400 Theobroma cacao HOM05D005119 ORTHO05D006338 2.1e-102 375.9 227 87.7
Actinidia07012 Actinidia chinensis HOM05D005119 ORTHO05D006338 2.8e-102 375.6 224 89.7
Cc01_g07550 Coffea canephora HOM05D005119 ORTHO05D006338 2.8e-102 375.6 226 87.2
BcaB08g36485 Brassica carinata HOM05D005119 ORTHO05D006338 6.2e-102 374.4 227 86.8
CAN.G864.4 Capsicum annuum HOM05D005119 ORTHO05D006338 6.2e-102 374.4 229 87.8
PSO339G0009 Papaver somniferum HOM05D005119 ORTHO05D006338 6.2e-102 374.4 224 87.5
Sp6g23450 Schrenkiella parvula HOM05D005119 ORTHO05D006338 6.2e-102 374.4 227 87.2
Aa31LG1G13700 Aethionema arabicum HOM05D005119 ORTHO05D006338 1.1e-101 373.6 227 87.2
AL6G32630 Arabidopsis lyrata HOM05D005119 ORTHO05D006338 1.1e-101 373.6 227 87.2
AT5G21070 Arabidopsis thaliana HOM05D005119 ORTHO05D006338 1.1e-101 373.6 227 87.2
Peaxi162Scf00217g00811 Petunia axillaris HOM05D005119 ORTHO05D006338 1.4e-101 373.2 228 87.7
BNapus_Darmor_BZH_scaffold_38p01200 Brassica napus HOM05D005119 ORTHO05D006338 1.8e-101 372.9 227 86.8
C02p10590 Brassica napus HOM05D005119 ORTHO05D006338 1.8e-101 372.9 227 86.8
BraA02t05611Z Brassica rapa HOM05D005119 ORTHO05D006338 1.8e-101 372.9 227 86.8
CARHR191800 Cardamine hirsuta HOM05D005119 ORTHO05D006338 1.8e-101 372.9 227 86.8
MELO3C015629.2 Cucumis melo HOM05D005119 ORTHO05D006338 1.8e-101 372.9 231 84.4
Migut.N02419 Erythranthe guttata HOM05D005119 ORTHO05D006338 1.8e-101 372.9 225 87.6
Potri.004G196600 Populus trichocarpa HOM05D005119 ORTHO05D006338 1.8e-101 372.9 229 85.2
SalBow3G0587 Salvia bowleyana HOM05D005119 ORTHO05D006338 1.8e-101 372.9 223 87.0
vmacro04109 Vaccinium macrocarpon HOM05D005119 ORTHO05D006338 1.8e-101 372.9 235 85.5
BcaC03g13824 Brassica carinata HOM05D005119 ORTHO05D006338 2.4e-101 372.5 227 86.3
MSTRG.17662 Avicennia marina HOM05D005119 ORTHO05D006338 3.1e-101 372.1 225 86.2
Lj2A941G6 Lonicera japonica HOM05D005119 ORTHO05D006338 3.1e-101 372.1 225 88.0
Ca_06151_v3 Cicer arietinum L. HOM05D005119 ORTHO05D006338 4.0e-101 371.7 234 84.2
CANSAT54G2327 Cannabis sativa HOM05D005119 ORTHO05D006338 5.2e-101 371.3 230 85.7
EL10Ac7g16218 Beta vulgaris HOM05D005119 ORTHO05D006338 6.8e-101 370.9 229 85.2
BolC2t07092H Brassica oleracea HOM05D005119 ORTHO05D006338 6.8e-101 370.9 227 85.9
QL01p020410 Quercus lobata HOM05D005119 ORTHO05D006338 6.8e-101 370.9 231 86.6
Duzib168G2211 Durio zibethinus HOM05D005119 ORTHO05D006338 8.9e-101 370.5 227 86.3
Medtr5g087720 Medicago truncatula HOM05D005119 ORTHO05D006338 8.9e-101 370.5 215 88.8
Gorai.009G105100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.5e-100 369.8 227 86.3
MD11G1180800 Malus domestica HOM05D005119 ORTHO05D006338 1.5e-100 369.8 230 85.7
Manes.04G053600 Manihot esculenta HOM05D005119 ORTHO05D006338 1.5e-100 369.8 230 85.7
FAN25G0803 Fragaria x ananassa HOM05D005119 ORTHO05D006338 2.0e-100 369.4 256 78.9
Lalb_Chr17g0347491 Lupinus albus HOM05D005119 ORTHO05D006338 2.0e-100 369.4 228 84.6
MBI13_g02397_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.0e-100 369.4 227 85.9
PSO384G4010 Papaver somniferum HOM05D005119 ORTHO05D006338 2.0e-100 369.4 224 86.6
Potri.009G158800 Populus trichocarpa HOM05D005119 ORTHO05D006338 2.0e-100 369.4 232 86.2
COL.COLO4_18366 Corchorus olitorius HOM05D005396 ORTHO05D006338 2.6e-100 369.0 214 90.2
Gohir.D05G101000 Gossypium hirsutum HOM05D005119 ORTHO05D006338 2.6e-100 369.0 227 85.9
Sed0002058 Sechium edule HOM05D005119 ORTHO05D006338 3.4e-100 368.6 232 84.1
THA.LOC104799587 Tarenaya hassleriana HOM05D005119 ORTHO05D006338 3.4e-100 368.6 227 86.8
Glyma.02G274200 Glycine max HOM05D005119 ORTHO05D006338 4.4e-100 368.2 227 85.0
Nitab4.5_0010431g0020 Nicotiana tabacum HOM05D005119 ORTHO05D006338 4.4e-100 368.2 228 85.5
SGA_v2.0_scaffold16G07568 Striga asiatica HOM05D005119 ORTHO05D006338 4.4e-100 368.2 225 85.3
DCAR_002131 Daucus carota HOM05D005119 ORTHO05D006338 5.8e-100 367.9 224 86.6
unitig_27.g25021 Utricularia gibba HOM05D005119 ORTHO05D006338 5.8e-100 367.9 225 85.8
PGSC0003DMG400008707 Solanum tuberosum HOM05D005119 ORTHO05D006338 7.6e-100 367.5 228 86.8
ClCG03G014150 Citrullus lanatus HOM05D005119 ORTHO05D006338 9.9e-100 367.1 231 83.5
Psat2g022840 Pisum sativum HOM05D005119 ORTHO05D006338 1.3e-99 366.7 232 83.2
Sopen01g004620 Solanum pennellii HOM05D005119 ORTHO05D006338 1.3e-99 366.7 223 87.4
Gohir.A05G101200 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.7e-99 366.3 227 85.5
TAR636G0794 Trochodendron aralioides HOM05D005119 ORTHO05D006338 1.7e-99 366.3 227 85.9
CsaV3_1G042110 Cucumis sativus L. HOM05D005119 ORTHO05D006338 4.9e-99 364.8 231 83.5
HanXRQChr13g0420891 Helianthus annuus HOM05D005119 ORTHO05D006338 4.9e-99 364.8 229 85.6
Sed0001894 Sechium edule HOM05D005119 ORTHO05D006338 4.9e-99 364.8 231 83.5
ECA240G4195 Erigeron canadensis HOM05D005119 ORTHO05D006338 6.4e-99 364.4 235 83.4
Aqoxy2G00066 Aquilegia oxysepala HOM05D005119 ORTHO05D006338 1.1e-98 363.6 228 85.1
TPR.G11644 Trifolium pratense HOM05D005119 ORTHO05D006338 1.4e-98 363.2 233 83.3
MSTRG.12410 Avicennia marina HOM05D005119 ORTHO05D006338 1.9e-98 362.8 225 84.9
Glyma.14G041900 Glycine max HOM05D005119 ORTHO05D006338 1.9e-98 362.8 215 87.9
Phvul.008G207500 Phaseolus vulgaris HOM05D005119 ORTHO05D006338 2.4e-98 362.5 226 85.0
Manes.11G112200 Manihot esculenta HOM05D005119 ORTHO05D006338 7.1e-98 360.9 230 83.9
VMungo0647G2262 Vigna mungo HOM05D005119 ORTHO05D006338 9.3e-98 360.5 210 89.0
Hund18832 Selenicereus undatus HOM05D005119 ORTHO05D006338 2.1e-97 359.4 208 89.9
Sc21g0006500 Simmondsia chinensis HOM05D005119 ORTHO05D006338 2.1e-97 359.4 207 91.8
MBI19_g28105_MAGBIO Magnolia biondii HOM05D005119 ORTHO05D006338 2.7e-97 359.0 224 81.2
Lj6g0018237 Lotus japonicus HOM05D005119 ORTHO05D006338 6.0e-97 357.8 212 86.8
Nitab4.5_0001183g0030 Nicotiana tabacum HOM05D005119 ORTHO05D006338 6.0e-97 357.8 215 87.4
AUR62001614 Chenopodium quinoa HOM05D005119 ORTHO05D006338 7.8e-97 357.5 229 82.5
Sabra04G0133300 Salix brachista HOM05D005119 ORTHO05D006338 7.8e-97 357.5 229 81.2
arahy.Tifrunner.gnm1.ann1.JSP71L Arachis hypogaea HOM05D005119 ORTHO05D006338 1.7e-96 356.3 210 86.7
LjContig00564g0012096 Lotus japonicus HOM05D005119 ORTHO05D006338 1.7e-96 356.3 232 81.9
arahy.Tifrunner.gnm1.ann1.4E592X Arachis hypogaea HOM05D005119 ORTHO05D006338 2.3e-96 355.9 210 86.7
ATR0307G125 Amborella trichopoda HOM05D005119 ORTHO05D006338 2.5e-95 352.4 224 82.6
SEGI_02516 Sequoiadendron giganteum HOM05D005119 ORTHO05D006338 5.6e-95 351.3 229 79.5
Lsat_1_v5_gn_3_116100 Lactuca sativa HOM05D005119 ORTHO05D006338 9.6e-95 350.5 202 90.1
Os01g0277700 Oryza sativa ssp. japonica HOM05D005119 ORTHO05D006338 8.1e-94 347.4 223 79.8
HPP92_006662 Vanilla planifolia HOM05D005119 ORTHO05D006338 1.4e-93 346.7 228 80.7
Oeu022226.2 Olea europaea HOM05D005119 ORTHO05D006338 2.9e-91 339.0 300 66.0
Zm00001eb128960 Zea mays HOM05D005119 ORTHO05D006338 4.2e-90 335.1 207 82.6
Ah.08g222830 Amaranthus hybridus HOM05D005119 ORTHO05D006338 6.6e-88 327.8 192 88.5
Sabra09G0124300 Salix brachista HOM05D005119 ORTHO05D006338 1.5e-87 326.6 233 77.3
CDE07G1923 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 6.4e-83 311.2 214 75.2
SMO347G0469 Selaginella moellendorffii HOM05D005119 ORTHO05D006338 7.1e-82 307.8 208 76.0
Mapoly0024s0118 Marchantia polymorpha HOM05D005119 ORTHO05D006338 9.3e-82 307.4 238 68.9
Solyc11g071510.3 Solanum lycopersicum HOM05D005119 ORTHO05D006338 9.6e-79 297.4 190 84.2
Haze_23668 Corylus avellana HOM05D005119 ORTHO05D006338 1.3e-75 287.0 194 82.0
Pp3c19_11640 Physcomitrium patens HOM05D005119 ORTHO05D006338 1.3e-75 287.0 215 70.2
Lj2C929T5 Lonicera japonica HOM05D005119 ORTHO05D006338 3.8e-75 285.4 178 86.5
Gohir.A08G000076 Gossypium hirsutum HOM05D005119 ORTHO05D006338 1.0e-72 277.3 161 91.3
Nn7g37297 Nelumbo nucifera HOM05D005119 ORTHO05D006338 3.9e-72 275.4 175 83.4
FvH4_3g27140 Fragaria vesca HOM05D005119 ORTHO05D006338 1.9e-71 273.1 157 91.7
CiPaw.14G091700 Carya illinoinensis HOM05D005119 ORTHO05D006338 7.4e-71 271.2 157 91.1
TAR369G0017 Trochodendron aralioides HOM05D005119 ORTHO05D006338 3.7e-70 268.9 157 90.4
SGA_v2.0_scaffold79G25507 Striga asiatica HOM05D005119 ORTHO05D006338 6.2e-70 268.1 157 89.2
DCAR_031602 Daucus carota HOM05D005119 ORTHO05D006338 1.2e-68 263.8 166 85.5
CDE08G0206 Ceratophyllum demersum HOM05D005119 ORTHO05D006338 2.6e-68 262.7 179 77.7
Cpa.g.sc103.65 Carica papaya HOM05D005119 ORTHO05D006338 5.0e-67 258.5 161 85.1
AagrBONN_evm.TU.Sc2ySwM_228.3807 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.2e-65 253.8 186 72.0
CDE04G1732 Ceratophyllum demersum HOM05D005119 ORTHO05D001779 1.2e-57 227.3 160 75.0
AUR62020163 Chenopodium quinoa HOM05D005119 ORTHO05D006338 9.1e-53 211.1 124 89.5
EL10Ac8g19914 Beta vulgaris HOM05D005119 ORTHO05D006338 1.4e-50 203.8 175 68.6
Gorai.006G031100 Gossypium raimondii HOM05D005119 ORTHO05D006338 1.9e-42 176.8 109 88.1
EL10Ac6g14714 Beta vulgaris HOM05D005119 ORTHO05D006338 9.4e-42 174.5 108 87.0
Solyc01g009145.1 Solanum lycopersicum HOM05D005119 ORTHO05D006338 2.7e-41 172.9 102 88.2
Gohir.D11G235450 Gossypium hirsutum HOM05D005119 ORTHO05D006338 6.5e-35 151.8 157 56.7
Gorai.004G093900 Gossypium raimondii HOM05D005119 ORTHO05D006338 2.3e-32 143.3 87 88.5
AagrBONN_evm.TU.Sc2ySwM_368.775 Anthoceros agrestis HOM05D005119 ORTHO05D006338 1.6e-25 120.6 79 73.4
PRCOL_00002764 Prasinoderma coloniale HOM05D005119 ORTHO05D006338 2.6e-23 113.2 205 37.1
arahy.Tifrunner.gnm1.ann1.PKBV9I Arachis hypogaea HOM05D005119 ORTHO05D006338 4.9e-22 109.0 76 75.0
Actinidia37188 Actinidia chinensis HOM05D005119 ORTHO05D006338 7.0e-21 105.1 56 91.1
RcHm_v2.0_Chr5g0049771 Rosa chinensis HOM05D005119 ORTHO05D006338 5.0e-19 99.0 64 76.6
Oeu048804.2 Olea europaea HOM05D001997 ORTHO05D004620 4.0e-16 89.4 66 69.7
SHI25369 Sapria himalayana HOM05D005119 ORTHO05D006338 5.7e-15 85.5 65 66.2
Dinv01011 Davidia involucrata HOM05D005119 ORTHO05D006338 3.0e-11 73.2 50 74.0


User provided reference genes

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