Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 8.3e-183 643.7 346 100.0
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 6.2e-69 265.4 365 48.2
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 7.8e-64 248.4 368 45.1
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 7.8e-64 248.4 372 45.4
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 2.3e-63 246.9 369 46.1
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 3.9e-63 246.1 365 44.7
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 6.6e-63 245.4 361 44.3
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 1.1e-62 244.6 368 46.2
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 5.6e-62 242.3 373 44.8
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 3.6e-61 239.6 363 44.6
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 8.1e-61 238.4 374 44.9
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 1.1e-60 238.0 377 44.0
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 1.4e-60 237.7 380 45.5
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 1.8e-60 237.3 381 43.3
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 8.9e-60 235.0 380 45.3
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 1.2e-59 234.6 375 43.7
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 1.2e-59 234.6 383 43.9
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 1.5e-59 234.2 371 44.7
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 2.0e-59 233.8 355 45.1
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 7.1e-57 225.3 363 42.4
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 6.2e-53 212.2 419 40.1
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 6.9e-52 208.8 340 42.6
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.5e-48 196.4 400 36.0
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 8.7e-47 191.8 398 37.9
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 8.7e-47 191.8 309 41.7
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 2.4e-44 183.7 368 41.8
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 5.3e-44 182.6 297 44.1
MBI13_g29622_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 7.6e-43 178.7 387 36.4
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 1.7e-42 177.6 477 32.3
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 2.9e-42 176.8 425 32.7
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 3.2e-41 173.3 383 35.0
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 9.3e-41 171.8 359 36.8
CsaV3_4G028970 Cucumis sativus L. HOM05D007667 ORTHO05D008033 2.7e-40 170.2 413 34.9
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 2.7e-40 170.2 377 37.4
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 3.0e-39 166.8 368 35.6
Nn7g37184 Nelumbo nucifera HOM05D007667 ORTHO05D001109 5.1e-39 166.0 210 49.5
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 8.7e-39 165.2 346 37.0
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 4.8e-37 159.5 362 32.0
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 4.0e-36 156.4 263 43.3
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.5e-35 154.5 336 35.1
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.4e-35 153.3 404 36.4
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.7e-34 151.0 468 30.6
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.9e-34 150.2 398 31.9
Ca_08329_v3 Cicer arietinum L. HOM05D007667 ORTHO05D008033 4.9e-34 149.4 237 42.6
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 1.1e-33 148.3 410 32.9
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 1.4e-33 147.9 380 35.0
Sed0012185 Sechium edule HOM05D007667 ORTHO05D008033 1.4e-33 147.9 423 33.8
ClCG04G005020 Citrullus lanatus HOM05D007667 ORTHO05D008033 2.5e-33 147.1 421 31.1
Prupe.7G023900 Prunus persica HOM05D007667 ORTHO05D008033 2.5e-33 147.1 182 50.5
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 1.0e-31 141.7 400 33.5
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 3.9e-31 139.8 350 33.7
Dinv02787 Davidia involucrata HOM05D007667 ORTHO05D008033 5.1e-31 139.4 256 42.6
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 1.6e-29 134.4 393 30.3
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 2.1e-29 134.0 370 31.9
AUR62043193 Chenopodium quinoa HOM05D003743 ORTHO05D004311 2.4e-28 130.6 336 35.1
arahy.Tifrunner.gnm1.ann1.EU10QV Arachis hypogaea HOM05D007667 ORTHO05D008033 4.0e-28 129.8 180 51.1
arahy.Tifrunner.gnm1.ann1.8XR3F9 Arachis hypogaea HOM05D007667 ORTHO05D008033 5.3e-28 129.4 179 50.8
Lj1A1064T35 Lonicera japonica HOM05D007667 ORTHO05D008033 4.5e-27 126.3 206 43.2
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 5.8e-27 125.9 351 32.5
Cfa010473 Carpinus fangiana HOM05D007667 ORTHO05D008033 6.5e-26 122.5 160 48.1
Nitab4.5_0002201g0030 Nicotiana tabacum HOM05D007667 ORTHO05D008033 1.4e-25 121.3 355 31.8
Lalb_Chr22g0358171 Lupinus albus HOM05D007667 ORTHO05D008033 2.5e-25 120.6 170 47.6
EL10Ac3g07362 Beta vulgaris HOM05D007667 ORTHO05D008033 9.3e-25 118.6 390 29.2
HPP92_012452 Vanilla planifolia HOM05D007667 ORTHO05D008033 7.9e-24 115.5 374 30.2
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 1.3e-21 108.2 461 28.0
ClCG10G016970 Citrullus lanatus HOM05D007667 ORTHO05D008033 3.7e-21 106.7 259 32.8
arahy.Tifrunner.gnm1.ann1.3W78Z9 Arachis hypogaea HOM05D007667 ORTHO05D008033 8.2e-21 105.5 151 51.0
arahy.Tifrunner.gnm1.ann1.8931ZB Arachis hypogaea HOM05D007667 ORTHO05D008033 1.4e-20 104.8 155 51.0
Solyc08g067000.3 Solanum lycopersicum HOM05D007667 ORTHO05D008033 2.4e-20 104.0 356 27.2
Actinidia37860 Actinidia chinensis HOM05D007667 ORTHO05D008033 1.2e-19 101.7 356 27.8
ATR1096G118 Amborella trichopoda HOM05D007667 ORTHO05D008033 2.0e-19 100.9 187 43.3
PSO384G0308 Papaver somniferum HOM05D007667 ORTHO05D008033 4.5e-19 99.8 447 26.2
PSO339G5815 Papaver somniferum HOM05D007667 ORTHO05D008033 7.7e-19 99.0 456 27.2
Sopen08g020950 Solanum pennellii HOM05D007667 ORTHO05D008033 2.9e-18 97.1 341 26.7
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.1e-17 95.1 336 27.4
CsaV3_3G039420 Cucumis sativus L. HOM05D007667 ORTHO05D008033 1.4e-17 94.7 373 26.3
Sed0023543 Sechium edule HOM05D007667 ORTHO05D008033 2.5e-17 94.0 266 30.5
Dinv21555 Davidia involucrata HOM05D007667 ORTHO05D008033 9.4e-17 92.0 100 57.0
MELO3C030720.2 Cucumis melo HOM05D007667 ORTHO05D008033 6.1e-16 89.4 260 26.9
arahy.Tifrunner.gnm1.ann1.S7MPKE Arachis hypogaea HOM05D007667 ORTHO05D008033 1.8e-15 87.8 102 56.9
arahy.Tifrunner.gnm1.ann1.NYTL45 Arachis hypogaea HOM05D007667 ORTHO05D008033 5.1e-15 86.3 102 56.9
arahy.Tifrunner.gnm1.ann1.48UEJW Arachis hypogaea HOM05D007667 ORTHO05D008033 6.7e-15 85.9 99 54.5
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 4.3e-14 83.2 187 33.7
Lalb_Chr22g0358161 Lupinus albus HOM05D007667 ORTHO05D008033 7.4e-14 82.4 112 42.0
arahy.Tifrunner.gnm1.ann1.W45WAC Arachis hypogaea HOM05D007667 ORTHO05D008033 9.7e-14 82.0 101 52.5
MBI13_g08647_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 2.2e-13 80.9 115 43.5
CDE02G4005 Ceratophyllum demersum HOM05D000558 ORTHO05D008033 4.8e-13 79.7 249 30.9
AUR62020979 Chenopodium quinoa HOM05D003743 ORTHO05D004311 6.3e-13 79.3 127 50.4
Cpa.g.sc33.176 Carica papaya HOM05D007667 ORTHO05D008033 3.1e-12 77.0 173 38.7
MELO3C019169.2 Cucumis melo HOM05D007667 ORTHO05D008033 2.0e-11 74.3 83 47.0
unitig_744.g24157 Utricularia gibba HOM05D007667 ORTHO05D008033 3.4e-11 73.6 175 42.3
CDE04G0047 Ceratophyllum demersum HOM05D007667 ORTHO05D008033 1.0e-10 72.0 257 28.4
HPP92_014340 Vanilla planifolia HOM05D007667 ORTHO05D008033 1.0e-10 72.0 170 34.1
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-10 70.5 238 27.7
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 2.9e-10 70.5 238 27.3
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 2.9e-10 70.5 249 26.5
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 3.8e-10 70.1 299 26.1
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 5.0e-10 69.7 243 27.2
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 1.1e-09 68.6 81 43.2
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 2.5e-09 67.4 272 26.5
Ah.04g150340 Amaranthus hybridus HOM05D003123 ORTHO05D003492 3.2e-09 67.0 129 35.7
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 4.2e-09 66.6 252 26.2
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 4.2e-09 66.6 252 26.2
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 5.5e-09 66.2 255 26.3
FvH4_1g29470 Fragaria vesca HOM05D007667 ORTHO05D008033 5.5e-09 66.2 97 42.3
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 9.4e-09 65.5 257 26.1
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.2e-08 65.1 241 24.5
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 1.6e-08 64.7 267 26.2
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 1.6e-08 64.7 267 26.2
AUR62020980 Chenopodium quinoa HOM05D007667 ORTHO05D008033 2.1e-08 64.3 69 44.9
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 2.1e-08 64.3 87 37.9
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 2.7e-08 63.9 306 26.5
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.7e-08 63.9 263 25.1
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 6.1e-08 62.8 256 24.6
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 6.1e-08 62.8 256 24.6
MBI13_g31583_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 6.1e-08 62.8 54 64.8
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 1.4e-07 61.6 256 24.6
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 1.8e-07 61.2 247 25.5
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 3.9e-07 60.1 243 24.7
MBI13_g08646_MAGBIO Magnolia biondii HOM05D007667 ORTHO05D008033 5.1e-07 59.7 68 47.1
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 8.8e-07 58.9 245 25.3
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 1.5e-06 58.2 272 24.3
Os03g0319200 Oryza sativa ssp. japonica HOM05D043175 ORTHO05D008033 4.4e-06 56.6 99 38.4
Zm00001eb015190 Zea mays HOM05D043175 ORTHO05D008033 4.4e-06 56.6 104 36.5


User provided reference genes

Program Settings