Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G0870 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 7.8e-97 357.1 174 100.0
TWI53G1247 Tripterygium wilfordii HOM05D005696 ORTHO05D007099 4.9e-75 284.6 156 87.2
Manes.08G025300 Manihot esculenta HOM05D005696 ORTHO05D007099 2.2e-67 259.2 155 79.4
Sabra18G0074700 Salix brachista HOM05D005696 ORTHO05D007099 3.8e-67 258.5 149 79.9
Potri.018G086400 Populus trichocarpa HOM05D005696 ORTHO05D007099 6.5e-67 257.7 151 80.8
COL.COLO4_29734 Corchorus olitorius HOM05D005696 ORTHO05D007099 5.5e-66 254.6 149 78.5
Thecc.05G089100 Theobroma cacao HOM05D005696 ORTHO05D007099 9.3e-66 253.8 149 77.9
Ciclev10012817m.g Citrus clementina HOM05D005696 ORTHO05D007099 1.2e-65 253.4 150 78.7
GSVIVG01033843001 Vitis vinifera HOM05D005696 ORTHO05D007099 1.2e-65 253.4 157 78.3
Dinv21209 Davidia involucrata HOM05D005696 ORTHO05D007099 4.6e-65 251.5 149 79.2
QL07p039009 Quercus lobata HOM05D005696 ORTHO05D007099 6.1e-65 251.1 148 80.4
Atru.chr8.1538 Acer truncatum HOM05D005696 ORTHO05D007099 1.0e-64 250.4 151 78.8
QL07p038757 Quercus lobata HOM05D005696 ORTHO05D007099 1.0e-64 250.4 154 77.3
CSS0033781 Camellia sinensis var. sinensis HOM05D005696 ORTHO05D007099 1.3e-64 250.0 156 75.6
Cfa016607 Carpinus fangiana HOM05D005696 ORTHO05D007099 1.3e-64 250.0 152 77.0
Haze_19611 Corylus avellana HOM05D005696 ORTHO05D007099 1.5e-63 246.5 152 77.0
Duzib106G0894 Durio zibethinus HOM05D005696 ORTHO05D007099 4.3e-63 245.0 155 72.9
Lj2P137T17 Lonicera japonica HOM05D005696 ORTHO05D007099 4.3e-63 245.0 156 73.7
Rhsim03G0075100 Rhododendron simsii HOM05D005696 ORTHO05D007099 7.4e-63 244.2 152 75.0
PGR142G1689 Punica granatum HOM05D005696 ORTHO05D007099 1.3e-62 243.4 158 74.1
AUR62028517 Chenopodium quinoa HOM05D005696 ORTHO05D007099 2.8e-62 242.3 153 71.2
arahy.Tifrunner.gnm1.ann1.NXU1NB Arachis hypogaea HOM05D005696 ORTHO05D007099 3.7e-62 241.9 149 75.8
Gorai.002G158300 Gossypium raimondii HOM05D005696 ORTHO05D007099 3.7e-62 241.9 157 72.6
Lj2P1003T8 Lonicera japonica HOM05D005696 ORTHO05D007099 4.8e-62 241.5 156 71.8
MD06G1040400 Malus domestica HOM05D005696 ORTHO05D007099 4.8e-62 241.5 144 77.1
Hma1.2p1_0084F.1_g043820 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.3e-62 241.1 155 72.9
Hma1.2p1_0820F.1_g223835 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 6.3e-62 241.1 155 72.9
Sc02g0000250 Simmondsia chinensis HOM05D005696 ORTHO05D007099 6.3e-62 241.1 156 71.2
Ca_09006_v3 Cicer arietinum L. HOM05D005696 ORTHO05D007099 2.4e-61 239.2 149 73.8
Gohir.D01G127700 Gossypium hirsutum HOM05D005696 ORTHO05D007099 2.4e-61 239.2 157 72.0
MD14G1023000 Malus domestica HOM05D005696 ORTHO05D007099 2.4e-61 239.2 149 74.5
Rhsim03G0187900 Rhododendron simsii HOM05D005696 ORTHO05D007099 3.1e-61 238.8 153 73.2
Lalb_Chr01g0018151 Lupinus albus HOM05D005696 ORTHO05D007099 4.1e-61 238.4 145 77.2
TPR.G22495 Trifolium pratense HOM05D005696 ORTHO05D007099 4.1e-61 238.4 149 73.8
CiPaw.09G014000 Carya illinoinensis HOM05D005696 ORTHO05D007099 5.3e-61 238.0 164 69.5
Sed0022063 Sechium edule HOM05D005696 ORTHO05D007099 6.9e-61 237.7 155 71.0
DCAR_013385 Daucus carota HOM05D005696 ORTHO05D007099 9.1e-61 237.3 149 73.8
Gohir.A01G138000 Gossypium hirsutum HOM05D005696 ORTHO05D007099 9.1e-61 237.3 157 71.3
TPR.G19517 Trifolium pratense HOM05D005696 ORTHO05D007099 1.5e-60 236.5 149 73.8
Cc03_g11090 Coffea canephora HOM05D005696 ORTHO05D007099 2.0e-60 236.1 147 73.5
CAN.G397.49 Capsicum annuum HOM05D005696 ORTHO05D007099 2.6e-60 235.7 149 72.5
CsaV3_3G037280 Cucumis sativus L. HOM05D005696 ORTHO05D007099 2.6e-60 235.7 153 69.3
Eucgr.K02040 Eucalyptus grandis HOM05D005696 ORTHO05D007099 3.4e-60 235.3 146 75.3
Medtr7g104610 Medicago truncatula HOM05D005696 ORTHO05D007099 3.4e-60 235.3 149 71.1
RcHm_v2.0_Chr3g0473671 Rosa chinensis HOM05D005696 ORTHO05D007099 3.4e-60 235.3 151 72.2
Ah.01g020980 Amaranthus hybridus HOM05D005696 ORTHO05D007099 4.5e-60 235.0 153 69.3
ClCG10G018970 Citrullus lanatus HOM05D005696 ORTHO05D007099 4.5e-60 235.0 155 71.6
FvH4_6g18700 Fragaria vesca HOM05D005696 ORTHO05D007099 4.5e-60 235.0 151 72.2
Oeu017678.1 Olea europaea HOM05D005696 ORTHO05D007099 4.5e-60 235.0 157 70.7
Oeu017679.1 Olea europaea HOM05D005696 ORTHO05D007099 4.5e-60 235.0 157 70.7
MELO3C009473.2 Cucumis melo HOM05D005696 ORTHO05D007099 1.0e-59 233.8 147 73.5
Glyma.19G194929 Glycine max HOM05D005696 ORTHO05D007099 1.0e-59 233.8 154 71.4
ECA240G0707 Erigeron canadensis HOM05D005696 ORTHO05D007099 1.3e-59 233.4 153 71.2
DCAR_007752 Daucus carota HOM05D005696 ORTHO05D007099 1.7e-59 233.0 154 70.1
FAN14G5868 Fragaria x ananassa HOM05D005696 ORTHO05D007099 2.2e-59 232.6 151 71.5
Glyma.03G195900 Glycine max HOM05D005696 ORTHO05D007099 2.2e-59 232.6 155 71.0
Phvul.001G189800 Phaseolus vulgaris HOM05D005696 ORTHO05D007099 2.2e-59 232.6 147 74.8
Nn2g14158 Nelumbo nucifera HOM05D005696 ORTHO05D007099 2.9e-59 232.3 154 70.1
PGSC0003DMG400008956 Solanum tuberosum HOM05D005696 ORTHO05D007099 2.9e-59 232.3 149 69.8
CANSAT80G0528 Cannabis sativa HOM05D005696 ORTHO05D007099 3.8e-59 231.9 147 73.5
FAN05G4755 Fragaria x ananassa HOM05D005696 ORTHO05D007099 6.5e-59 231.1 151 70.9
TPR.G30027 Trifolium pratense HOM05D005696 ORTHO05D007099 6.5e-59 231.1 151 68.9
VMungo1383G2828 Vigna mungo HOM05D005696 ORTHO05D007099 6.5e-59 231.1 147 74.8
MSTRG.19260 Avicennia marina HOM05D005696 ORTHO05D007099 8.5e-59 230.7 155 69.0
EL10Ac7g16916 Beta vulgaris HOM05D005696 ORTHO05D007099 8.5e-59 230.7 151 68.9
Sed0001709 Sechium edule HOM05D005696 ORTHO05D007099 8.5e-59 230.7 145 71.0
Nitab4.5_0000794g0110 Nicotiana tabacum HOM05D005696 ORTHO05D007099 1.9e-58 229.6 156 66.7
Sopen09g004540 Solanum pennellii HOM05D005696 ORTHO05D007099 2.5e-58 229.2 149 69.1
Hma1.2p1_0232F.1_g097930 Hydrangea macrophylla HOM05D005696 ORTHO05D007099 3.2e-58 228.8 146 72.6
Solyc09g009780.4 Solanum lycopersicum HOM05D005696 ORTHO05D007099 3.2e-58 228.8 149 69.1
Aqoxy1G00460 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 4.2e-58 228.4 147 71.4
TAR374G1347 Trochodendron aralioides HOM05D005696 ORTHO05D007099 4.2e-58 228.4 153 69.3
Lsat_1_v5_gn_7_37701 Lactuca sativa HOM05D005696 ORTHO05D007099 5.5e-58 228.0 155 70.3
Prupe.7G110200 Prunus persica HOM05D005696 ORTHO05D007099 5.5e-58 228.0 143 72.7
Cpa.g.sc5.19 Carica papaya HOM05D005696 ORTHO05D007099 2.7e-57 225.7 143 74.1
SalBow3G1016 Salvia bowleyana HOM05D005696 ORTHO05D007099 2.7e-57 225.7 147 69.4
SGA_v2.0_scaffold75G24749 Striga asiatica HOM05D005696 ORTHO05D007099 2.7e-57 225.7 146 69.2
HanXRQChr03g0060731 Helianthus annuus HOM05D005696 ORTHO05D007099 1.0e-56 223.8 155 66.5
Psat3g033280 Pisum sativum HOM05D005696 ORTHO05D007099 1.4e-56 223.4 147 68.7
SalBow6G6426 Salvia bowleyana HOM05D005696 ORTHO05D007099 3.9e-56 221.9 160 65.0
unitig_744.g24697 Utricularia gibba HOM05D001616 ORTHO05D007099 5.1e-56 221.5 147 67.3
Aa31LG5G12820 Aethionema arabicum HOM05D005696 ORTHO05D007099 8.8e-56 220.7 163 64.4
Aqoxy2G01202 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 8.8e-56 220.7 146 69.2
CiPaw.10G009800 Carya illinoinensis HOM05D005696 ORTHO05D007099 1.7e-54 216.5 138 71.7
THA.LOC104820979 Tarenaya hassleriana HOM05D005696 ORTHO05D007099 2.8e-54 215.7 155 65.8
HanXRQChr07g0189921 Helianthus annuus HOM05D005696 ORTHO05D007099 8.2e-54 214.2 148 68.9
AL6G26610 Arabidopsis lyrata HOM05D005696 ORTHO05D007099 5.3e-53 211.5 146 67.1
AT5G15770 Arabidopsis thaliana HOM05D005696 ORTHO05D007099 6.9e-53 211.1 144 68.1
Thhalv10014892m.g Eutrema salsugineum HOM05D005696 ORTHO05D007099 6.9e-53 211.1 154 65.6
C02p07960 Brassica napus HOM05D005696 ORTHO05D007099 9.1e-53 210.7 154 66.2
Carub.0006s1392 Capsella rubella HOM05D005696 ORTHO05D007099 9.1e-53 210.7 144 68.1
BraA02t05292Z Brassica rapa HOM05D005696 ORTHO05D007099 2.0e-52 209.5 154 65.6
SHI28289 Sapria himalayana HOM05D005696 ORTHO05D007099 2.0e-52 209.5 142 65.5
PSO339G3505 Papaver somniferum HOM05D005696 ORTHO05D007099 2.6e-52 209.1 144 66.7
MBI04_g14262_MAGBIO Magnolia biondii HOM05D005696 ORTHO05D007099 3.4e-52 208.8 140 66.4
A02p03210 Brassica napus HOM05D005696 ORTHO05D007099 4.5e-52 208.4 154 64.9
Sp6g28350 Schrenkiella parvula HOM05D005696 ORTHO05D007099 5.9e-52 208.0 154 64.9
BolC9t58974H Brassica oleracea HOM05D005696 ORTHO05D007099 7.7e-52 207.6 144 67.4
A10p23260 Brassica napus HOM05D005696 ORTHO05D007099 1.0e-51 207.2 144 66.7
C09p61330 Brassica napus HOM05D005696 ORTHO05D007099 1.0e-51 207.2 144 67.4
PSO384G1553 Papaver somniferum HOM05D005696 ORTHO05D007099 1.0e-51 207.2 144 66.0
BraA10t44394Z Brassica rapa HOM05D005696 ORTHO05D007099 1.3e-51 206.8 144 66.7
BcaC03g18448 Brassica carinata HOM05D005696 ORTHO05D007099 1.7e-51 206.5 154 64.9
BolC2t06719H Brassica oleracea HOM05D005696 ORTHO05D007099 1.7e-51 206.5 154 64.9
Aa31LG11G13810 Aethionema arabicum HOM05D005696 ORTHO05D007099 1.1e-50 203.8 146 65.1
BcaNung02203 Brassica carinata HOM05D005696 ORTHO05D007099 1.9e-50 203.0 158 61.4
CARHR197560 Cardamine hirsuta HOM05D005696 ORTHO05D007099 2.1e-49 199.5 144 63.9
HPP92_015765 Vanilla planifolia HOM05D005696 ORTHO05D007099 1.0e-48 197.2 142 63.4
Dinv31687 Davidia involucrata HOM05D005696 ORTHO05D010438 8.8e-48 194.1 120 75.8
SEGI_17930 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 4.8e-46 188.3 160 54.4
ATR0618G201 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.4e-45 186.8 155 56.8
BcaC04g18939 Brassica carinata HOM05D005696 ORTHO05D007099 7.0e-45 184.5 144 62.5
ATR0605G169 Amborella trichopoda HOM05D005696 ORTHO05D007099 1.0e-43 180.6 143 57.3
Peaxi162Scf00006g00016 Petunia axillaris HOM05D005696 ORTHO05D007099 1.1e-42 177.2 124 67.7
FAN09G4491 Fragaria x ananassa HOM05D005696 ORTHO05D007099 9.4e-42 174.1 120 67.5
SMO364G0918 Selaginella moellendorffii HOM05D005696 ORTHO05D007099 2.2e-38 162.9 131 59.5
Migut.C00979 Erythranthe guttata HOM05D005696 ORTHO05D007099 1.1e-37 160.6 99 71.7
AagrBONN_evm.TU.Sc2ySwM_344.341 Anthoceros agrestis HOM05D005696 ORTHO05D007099 1.4e-37 160.2 145 53.1
Os09g0488000 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 4.1e-37 158.7 159 47.8
Zm00001eb189250 Zea mays HOM05D005696 ORTHO05D007099 4.5e-36 155.2 144 52.1
Peaxi162Scf00068g02511 Petunia axillaris HOM05D005696 ORTHO05D007099 1.3e-35 153.7 109 67.0
Os02g0717700 Oryza sativa ssp. japonica HOM05D005696 ORTHO05D007099 8.5e-35 151.0 145 52.4
Mapoly0046s0019 Marchantia polymorpha HOM05D005696 ORTHO05D007099 2.1e-33 146.4 144 52.8
VMungo0540G0323 Vigna mungo HOM05D005696 ORTHO05D007099 3.6e-33 145.6 132 58.3
Aqoxy5G03051 Aquilegia oxysepala HOM05D005696 ORTHO05D007099 5.7e-31 138.3 90 68.9
MCO13G065 Micromonas commoda HOM05D005696 ORTHO05D007099 1.1e-29 134.0 143 48.3
Cre12.g560200 Chlamydomonas reinhardtii HOM05D005696 ORTHO05D007099 4.5e-28 128.6 144 47.2
SEGI_26718 Sequoiadendron giganteum HOM05D005696 ORTHO05D007099 5.0e-27 125.2 108 53.7
PRCOL_00001568 Prasinoderma coloniale HOM05D005696 ORTHO05D007099 2.5e-26 122.9 148 45.3
MD12G1036200 Malus domestica HOM05D005696 ORTHO05D007099 7.5e-23 111.3 78 60.3
VMungo1383G2413 Vigna mungo HOM05D005696 ORTHO05D007099 7.5e-23 111.3 147 44.2
CBR_g37710 Chara braunii HOM05D005696 ORTHO05D007099 2.2e-22 109.8 148 40.5
AagrBONN_evm.TU.Sc2ySwM_362.2223 Anthoceros agrestis HOM05D005696 ORTHO05D007099 2.0e-20 103.2 84 57.1
Pp3c14_20090 Physcomitrium patens HOM05D005696 ORTHO05D007099 1.5e-18 97.1 82 58.5


User provided reference genes

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