Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 1.1e-179 633.3 325 100.0
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 1.7e-105 386.7 327 63.3
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 3.0e-102 375.9 326 62.3
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 2.2e-100 369.8 381 55.4
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 2.4e-99 366.3 328 63.4
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 2.8e-95 352.8 328 60.4
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 6.2e-95 351.7 326 58.9
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 2.0e-93 346.7 325 57.8
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 7.5e-93 344.7 326 58.9
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.3e-92 344.0 326 58.6
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 6.4e-92 341.7 329 61.1
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 5.4e-91 338.6 330 59.4
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 8.6e-89 331.3 327 56.9
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 1.8e-86 323.6 325 56.9
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 3.1e-86 322.8 327 56.6
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 8.9e-86 321.2 330 55.2
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.0e-85 320.1 328 56.4
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 3.4e-85 319.3 330 55.2
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 6.4e-84 315.1 325 55.1
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 8.3e-84 314.7 328 55.5
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 8.3e-84 314.7 342 55.6
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.4e-83 313.9 328 55.5
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 4.1e-83 312.4 327 55.4
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 7.1e-83 311.6 326 56.4
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 9.2e-83 311.2 329 55.6
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 1.2e-82 310.8 327 55.7
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 2.7e-82 309.7 310 56.8
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.5e-80 303.9 343 53.6
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 4.3e-80 302.4 327 53.5
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 9.5e-80 301.2 390 47.7
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 2.8e-79 299.7 328 53.0
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 8.1e-79 298.1 335 51.0
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 8.4e-76 288.1 329 50.8
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.9e-75 287.0 332 49.1
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 2.4e-75 286.6 326 54.3
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 9.2e-75 284.6 370 47.6
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 1.2e-74 284.3 332 48.8
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.2e-74 284.3 330 49.1
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 2.1e-74 283.5 324 50.0
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 2.7e-74 283.1 326 52.5
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 4.6e-74 282.3 338 52.1
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 4.6e-74 282.3 341 48.4
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 7.8e-74 281.6 330 49.1
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 3.3e-72 276.2 341 49.9
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 4.3e-72 275.8 326 49.1
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 4.3e-72 275.8 288 54.9
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 9.6e-72 274.6 328 47.9
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 9.6e-72 274.6 332 47.9
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 3.6e-71 272.7 334 52.1
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 8.1e-71 271.6 326 48.8
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 3.1e-70 269.6 327 48.9
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 5.2e-70 268.9 267 57.7
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 5.2e-70 268.9 294 53.7
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 2.6e-69 266.5 327 51.4
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 9.9e-69 264.6 331 51.1
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 1.7e-68 263.8 258 55.8
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 1.0e-65 254.6 262 55.0
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 3.9e-65 252.7 332 47.9
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 6.6e-65 251.9 325 44.6
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 2.5e-64 250.0 329 49.5
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.8e-63 245.7 335 46.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 6.2e-63 245.4 324 46.6
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 8.1e-63 245.0 324 46.6
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.1e-62 244.6 328 47.0
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 9.9e-61 238.0 318 45.9
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 1.7e-60 237.3 240 55.4
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.2e-60 236.9 224 58.9
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 4.2e-59 232.6 326 45.1
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.2e-58 231.1 213 58.2
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 2.7e-58 229.9 293 46.1
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 3.5e-58 229.6 327 46.2
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 1.1e-56 224.6 327 46.5
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.1e-56 224.6 303 47.9
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 2.5e-56 223.4 325 42.5
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 5.6e-56 222.2 326 44.8
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 1.3e-55 221.1 327 45.6
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 1.1e-54 218.0 327 44.3
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.8e-54 217.2 262 48.1
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 4.0e-54 216.1 298 48.7
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.5e-53 212.6 305 43.6
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 6.4e-52 208.8 361 37.4
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 1.9e-51 207.2 294 45.2
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 7.1e-51 205.3 323 43.3
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 6.0e-50 202.2 272 43.4
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.8e-47 193.4 294 41.5
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 1.9e-43 180.6 284 43.3
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 2.5e-43 180.3 369 33.9
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 9.3e-43 178.3 328 38.4
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 1.8e-41 174.1 179 53.1
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 8.7e-41 171.8 329 37.4
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 6.3e-39 165.6 189 54.0
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 5.3e-38 162.5 180 51.1
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 2.5e-32 143.7 92 78.3
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 6.3e-31 139.0 104 65.4
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 5.9e-29 132.5 160 50.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.5e-27 127.1 85 70.6
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 6.9e-22 109.0 264 33.7
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 5.9e-21 105.9 333 27.3
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 7.7e-21 105.5 75 72.0
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.8e-20 103.2 122 50.0
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 1.9e-19 100.9 108 56.5
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 2.3e-17 94.0 67 73.1
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 7.4e-16 89.0 398 23.6
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 1.8e-14 84.3 336 27.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 7.0e-14 82.4 65 61.5
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 1.9e-11 74.3 41 87.8
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.9e-11 74.3 66 62.1
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.9e-11 74.3 393 24.4
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 6.1e-10 69.3 45 73.3
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 4.0e-09 66.6 67 49.3
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 1.7e-07 61.2 378 21.7
MD12G1047700 Malus domestica HOM05D007071 ORTHO05D008677 3.7e-07 60.1 45 62.2
Actinidia26606 Actinidia chinensis HOM05D002116 ORTHO05D002438 6.3e-07 59.3 100 43.0
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 6.3e-07 59.3 73 42.5


User provided reference genes

Program Settings