Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G0140 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.5e-72 276.2 144 100.0
TWI74G0676 Tripterygium wilfordii HOM05D005427 ORTHO05D006461 1.2e-47 193.4 117 82.9
Atru.chr3.1127 Acer truncatum HOM05D005427 ORTHO05D006461 1.1e-35 153.7 117 65.0
Atru.chr3.1136 Acer truncatum HOM05D005427 ORTHO05D006461 1.1e-35 153.7 117 65.0
Ciclev10026408m.g Citrus clementina HOM05D005427 ORTHO05D006461 2.4e-35 152.5 117 62.4
Potri.017G091300 Populus trichocarpa HOM05D005427 ORTHO05D006461 2.4e-35 152.5 117 62.4
QL06p037683 Quercus lobata HOM05D005427 ORTHO05D006461 3.5e-34 148.7 117 61.5
Duzib264G0001 Durio zibethinus HOM05D005427 ORTHO05D006461 2.3e-33 146.0 117 60.7
GSVIVG01017423001 Vitis vinifera HOM05D005427 ORTHO05D006461 3.9e-33 145.2 122 57.4
Prupe.6G211100 Prunus persica HOM05D005427 ORTHO05D006461 1.5e-32 143.3 117 59.0
Manes.13G105100 Manihot esculenta HOM05D005427 ORTHO05D006461 2.5e-32 142.5 114 60.5
THA.LOC104819282 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 7.3e-32 141.0 112 60.7
ClCG09G016510 Citrullus lanatus HOM05D005427 ORTHO05D006461 1.2e-31 140.2 111 60.4
Gohir.A11G206966 Gossypium hirsutum HOM05D005427 ORTHO05D006461 1.6e-31 139.8 107 62.6
TAR628G1492 Trochodendron aralioides HOM05D001631 ORTHO05D001591 1.6e-31 139.8 117 60.7
COL.COLO4_11665 Corchorus olitorius HOM05D005427 ORTHO05D006461 4.7e-31 138.3 117 54.7
Thecc.01G082100 Theobroma cacao HOM05D005427 ORTHO05D006461 8.1e-31 137.5 105 63.8
Gorai.007G232600 Gossypium raimondii HOM05D005427 ORTHO05D006461 1.4e-30 136.7 107 61.7
CSS0026502 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.8e-30 136.3 117 54.7
CsaV3_7G007450 Cucumis sativus L. HOM05D005427 ORTHO05D006461 1.8e-30 136.3 111 58.6
Hma1.2p1_0561F.1_g178960 Hydrangea macrophylla HOM05D005427 ORTHO05D006461 6.8e-30 134.4 122 55.7
MELO3C018556.2 Cucumis melo HOM05D005427 ORTHO05D006461 8.9e-30 134.0 111 57.7
CSS0024088 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.2e-29 133.7 116 56.0
CSS0032221 Camellia sinensis var. sinensis HOM05D005427 ORTHO05D006461 1.2e-29 133.7 116 56.0
TAR376G0349 Trochodendron aralioides HOM05D005427 ORTHO05D006461 1.2e-29 133.7 112 58.9
Dinv36993 Davidia involucrata HOM05D005427 ORTHO05D006461 7.6e-29 131.0 115 57.4
Sed0018601 Sechium edule HOM05D005427 ORTHO05D006461 7.6e-29 131.0 111 55.0
FvH4_1g18830 Fragaria vesca HOM05D005427 ORTHO05D006461 1.3e-28 130.2 116 55.2
Nn1g05775 Nelumbo nucifera HOM05D005427 ORTHO05D006461 1.7e-28 129.8 116 51.7
RcHm_v2.0_Chr2g0109701 Rosa chinensis HOM05D005427 ORTHO05D006461 6.4e-28 127.9 116 54.3
Rhsim07G0122400 Rhododendron simsii HOM05D005427 ORTHO05D006461 1.1e-27 127.1 116 54.3
Lalb_Chr04g0263231 Lupinus albus HOM05D005427 ORTHO05D006461 1.9e-27 126.3 108 56.5
Cfa001616 Carpinus fangiana HOM05D005427 ORTHO05D006461 4.1e-27 125.2 102 60.8
PGSC0003DMG400012980 Solanum tuberosum HOM05D005427 ORTHO05D006461 4.1e-27 125.2 124 50.0
Lj3g0020172 Lotus japonicus HOM05D005427 ORTHO05D006461 5.4e-27 124.8 117 53.8
CAN.G1830.8 Capsicum annuum HOM05D005427 ORTHO05D006461 7.1e-27 124.4 121 47.9
Sc06g0009050 Simmondsia chinensis HOM05D005427 ORTHO05D006461 2.1e-26 122.9 107 52.3
Gohir.D11G216500 Gossypium hirsutum HOM05D005427 ORTHO05D006461 3.5e-26 122.1 95 63.2
Sopen09g003480 Solanum pennellii HOM05D005427 ORTHO05D006461 4.6e-26 121.7 124 49.2
PGR102G2470 Punica granatum HOM05D005427 ORTHO05D006461 7.8e-26 120.9 117 51.3
AL5G29490 Arabidopsis lyrata HOM05D007023 ORTHO05D008684 1.0e-25 120.6 121 49.6
FAN23G0196 Fragaria x ananassa HOM05D005427 ORTHO05D006461 1.0e-25 120.6 126 49.2
MD01G1046300 Malus domestica HOM05D005427 ORTHO05D006461 1.0e-25 120.6 116 51.7
AT3G49645 Arabidopsis thaliana HOM05D005427 ORTHO05D006461 1.3e-25 120.2 112 54.5
MD15G1405500 Malus domestica HOM05D005427 ORTHO05D006461 1.7e-25 119.8 117 51.3
Phvul.003G285800 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 1.7e-25 119.8 117 48.7
SGA_v2.0_scaffold70G23436 Striga asiatica HOM05D005427 ORTHO05D006461 2.3e-25 119.4 121 45.5
TPR.G15264 Trifolium pratense HOM05D005427 ORTHO05D006461 2.3e-25 119.4 122 50.8
Phvul.003G285200 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 3.0e-25 119.0 117 48.7
AL7G47510 Arabidopsis lyrata HOM05D005427 ORTHO05D006461 5.1e-25 118.2 116 50.0
SGA_v2.0_scaffold4G02171 Striga asiatica HOM05D005427 ORTHO05D006461 5.1e-25 118.2 116 47.4
Migut.F01758 Erythranthe guttata HOM05D005427 ORTHO05D006461 8.7e-25 117.5 117 47.0
Aqoxy3G03178 Aquilegia oxysepala HOM05D005427 ORTHO05D006461 1.1e-24 117.1 112 48.2
Hund15020 Selenicereus undatus HOM05D005427 ORTHO05D006461 1.1e-24 117.1 113 50.4
Solyc09g008680.4 Solanum lycopersicum HOM05D005427 ORTHO05D006461 1.1e-24 117.1 124 46.8
Aa31LG4G18120 Aethionema arabicum HOM05D005427 ORTHO05D006461 1.5e-24 116.7 112 52.7
Glyma.08G273000 Glycine max HOM05D005427 ORTHO05D006461 1.5e-24 116.7 110 50.9
SGA_v2.0_scaffold147G36350 Striga asiatica HOM05D005427 ORTHO05D006461 1.5e-24 116.7 116 47.4
CiPaw.08G147100 Carya illinoinensis HOM05D005427 ORTHO05D006461 4.3e-24 115.2 115 49.6
CARHR158680 Cardamine hirsuta HOM05D005427 ORTHO05D006461 9.6e-24 114.0 117 50.4
Eucgr.H02348 Eucalyptus grandis HOM05D005427 ORTHO05D006461 9.6e-24 114.0 119 48.7
Hund13132 Selenicereus undatus HOM05D005427 ORTHO05D006461 9.6e-24 114.0 113 48.7
Carub.0005s1599 Capsella rubella HOM05D005427 ORTHO05D006461 1.2e-23 113.6 112 49.1
THA.LOC104799739 Tarenaya hassleriana HOM05D005427 ORTHO05D006461 1.2e-23 113.6 114 52.6
PSO761G0697 Papaver somniferum HOM05D005427 ORTHO05D006461 1.6e-23 113.2 117 48.7
Sp5g12450 Schrenkiella parvula HOM05D005427 ORTHO05D006461 1.6e-23 113.2 112 50.9
Cpa.g.sc3.369 Carica papaya HOM05D005427 ORTHO05D006461 3.6e-23 112.1 117 50.4
A06p28350 Brassica napus HOM05D005427 ORTHO05D006461 6.2e-23 111.3 112 50.9
BraA06t25777Z Brassica rapa HOM05D005427 ORTHO05D006461 6.2e-23 111.3 112 50.9
Thhalv10010700m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 1.1e-22 110.5 117 48.7
BraA07t29893Z Brassica rapa HOM05D005427 ORTHO05D006461 1.4e-22 110.2 112 49.1
BraA06t24896Z Brassica rapa HOM05D007023 ORTHO05D008684 1.8e-22 109.8 111 49.5
Psat4g120800 Pisum sativum HOM05D005427 ORTHO05D006461 1.8e-22 109.8 110 50.9
BcaC01g02424 Brassica carinata HOM05D005427 ORTHO05D006461 2.4e-22 109.4 112 50.0
C03p65440 Brassica napus HOM05D005427 ORTHO05D006461 2.4e-22 109.4 112 50.0
BolC3t18796H Brassica oleracea HOM05D005427 ORTHO05D006461 2.4e-22 109.4 112 50.0
FAN19G1732 Fragaria x ananassa HOM05D005427 ORTHO05D006461 2.4e-22 109.4 145 43.4
RcHm_v2.0_Chr5g0054161 Rosa chinensis HOM05D005427 ORTHO05D006461 3.1e-22 109.0 116 49.1
Sabra17G0080400 Salix brachista HOM05D005427 ORTHO05D006461 3.1e-22 109.0 119 51.3
Hund00873 Selenicereus undatus HOM05D005427 ORTHO05D006461 3.1e-22 109.0 109 49.5
Thhalv10019696m.g Eutrema salsugineum HOM05D005427 ORTHO05D006461 4.0e-22 108.6 117 47.9
CANSAT01G2304 Cannabis sativa HOM05D005427 ORTHO05D006461 1.2e-21 107.1 117 44.4
Haze_16903 Corylus avellana HOM05D005427 ORTHO05D006461 9.9e-21 104.0 138 47.1
BcaB01g00686 Brassica carinata HOM05D005427 ORTHO05D006461 1.3e-20 103.6 111 46.8
Nitab4.5_0006709g0040 Nicotiana tabacum HOM05D005427 ORTHO05D006461 3.8e-20 102.1 85 55.3
Cc09_g02990 Coffea canephora HOM05D005427 ORTHO05D006461 8.4e-20 100.9 82 56.1
Dinv21205 Davidia involucrata HOM05D005427 ORTHO05D006461 8.4e-20 100.9 115 48.7
Nitab4.5_0004281g0090 Nicotiana tabacum HOM05D005427 ORTHO05D006461 8.4e-20 100.9 123 42.3
CDE02G2678 Ceratophyllum demersum HOM05D005427 ORTHO05D006160 1.4e-19 100.1 117 41.9
C08p24660 Brassica napus HOM05D007023 ORTHO05D008684 1.9e-19 99.8 112 45.5
BolC8t50081H Brassica oleracea HOM05D007023 ORTHO05D008684 1.9e-19 99.8 112 45.5
BcaC07g39428 Brassica carinata HOM05D005427 ORTHO05D006461 5.4e-19 98.2 112 45.5
Medtr8g067265 Medicago truncatula HOM05D005427 ORTHO05D006461 5.4e-19 98.2 101 48.5
arahy.Tifrunner.gnm1.ann1.SHER6S Arachis hypogaea HOM05D006058 ORTHO05D007686 7.1e-19 97.8 131 42.0
Glyma.20G162400 Glycine max HOM05D005427 ORTHO05D006461 7.1e-19 97.8 115 48.7
Ah.01g015840 Amaranthus hybridus HOM05D005427 ORTHO05D006461 1.6e-18 96.7 111 44.1
A07p22100 Brassica napus HOM05D005427 ORTHO05D006461 2.1e-18 96.3 130 41.5
arahy.Tifrunner.gnm1.ann1.Y2QWLJ Arachis hypogaea HOM05D006058 ORTHO05D007686 2.7e-18 95.9 84 54.8
AUR62041740 Chenopodium quinoa HOM05D005427 ORTHO05D006461 4.6e-18 95.1 109 44.0
AUR62024067 Chenopodium quinoa HOM05D005427 ORTHO05D006461 6.0e-18 94.7 110 44.5
AUR62012052 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.0e-17 94.0 104 46.2
AUR62019836 Chenopodium quinoa HOM05D005427 ORTHO05D006461 1.3e-17 93.6 110 44.5
EL10Ac9g20957 Beta vulgaris HOM05D005427 ORTHO05D006461 1.7e-17 93.2 103 47.6
EL10Ac6g13479 Beta vulgaris HOM05D005427 ORTHO05D006461 2.3e-17 92.8 110 42.7
Ah.01g003640 Amaranthus hybridus HOM05D000109 ORTHO05D000520 3.0e-17 92.4 103 44.7
DCAR_006436 Daucus carota HOM05D005427 ORTHO05D006461 3.0e-17 92.4 104 47.1
vmacro07282 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 3.0e-17 92.4 120 41.7
Ah.16g109230 Amaranthus hybridus HOM05D005427 ORTHO05D006461 1.9e-16 89.7 110 41.8
ECA233G5189 Erigeron canadensis HOM05D005427 ORTHO05D006461 3.3e-16 89.0 106 43.4
PSO210G5957 Papaver somniferum HOM05D005427 ORTHO05D006461 3.3e-16 89.0 113 40.7
HPP92_024834 Vanilla planifolia HOM05D005427 ORTHO05D006461 4.3e-16 88.6 110 41.8
HPP92_026626 Vanilla planifolia HOM05D005427 ORTHO05D006461 4.3e-16 88.6 110 41.8
HanXRQChr12g0368771 Helianthus annuus HOM05D005427 ORTHO05D006461 1.6e-15 86.7 101 44.6
A06p18060 Brassica napus HOM05D007023 ORTHO05D008684 2.1e-15 86.3 113 41.6
Os10g0360900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 2.8e-15 85.9 111 38.7
Zm00001eb210960 Zea mays HOM05D005427 ORTHO05D006461 2.8e-15 85.9 106 40.6
Zm00001eb064010 Zea mays HOM05D005427 ORTHO05D006461 3.6e-15 85.5 106 39.6
Peaxi162Scf01051g00142 Petunia axillaris HOM05D005427 ORTHO05D006461 1.8e-14 83.2 72 52.8
Peaxi162Scf00500g00116 Petunia axillaris HOM05D005427 ORTHO05D006461 4.0e-14 82.0 104 40.4
MBI16_g14676_MAGBIO Magnolia biondii HOM05D005427 ORTHO05D006461 6.9e-14 81.3 108 42.6
BcaB02g09598 Brassica carinata HOM05D005427 ORTHO05D006461 1.2e-13 80.5 92 48.9
vmacro05473 Vaccinium macrocarpon HOM05D005427 ORTHO05D006461 6.4e-12 74.7 86 44.2
MSTRG.375 Avicennia marina HOM05D005427 ORTHO05D006461 1.1e-11 73.9 78 50.0
SalBow7G4264 Salvia bowleyana HOM05D005427 ORTHO05D006461 9.3e-11 70.9 98 40.8
Os07g0264900 Oryza sativa ssp. japonica HOM05D005427 ORTHO05D006461 1.2e-10 70.5 73 46.6
Phvul.002G065300 Phaseolus vulgaris HOM05D005427 ORTHO05D006461 2.7e-10 69.3 72 44.4
Pp3c24_9930 Physcomitrium patens HOM05D005427 ORTHO05D006461 6.0e-10 68.2 111 31.5
AagrBONN_evm.TU.Sc2ySwM_228.2937 Anthoceros agrestis HOM05D005427 ORTHO05D006461 1.0e-09 67.4 104 33.7


User provided reference genes

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