Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI77G0135 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 3.6e-123 444.9 221 100.0
TWI12G0492 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 4.8e-51 205.3 99 97.0
TWI36G0013 Tripterygium wilfordii HOM05D004094 ORTHO05D004601 5.2e-37 158.7 85 85.9
GSVIVG01008880001 Vitis vinifera HOM05D004094 ORTHO05D004601 3.3e-23 112.8 98 54.1
Haze_00454 Corylus avellana HOM05D004094 ORTHO05D004601 7.3e-23 111.7 102 55.9
Ciclev10000067m.g Citrus clementina HOM05D004094 ORTHO05D004601 2.1e-22 110.2 127 46.5
Cfa016008 Carpinus fangiana HOM05D004094 ORTHO05D004601 2.3e-21 106.7 102 53.9
Nn1g08759 Nelumbo nucifera HOM05D004094 ORTHO05D004601 3.1e-21 106.3 125 45.6
Thecc.08G123800 Theobroma cacao HOM05D004094 ORTHO05D004601 4.0e-21 105.9 100 54.0
Duzib041G0387 Durio zibethinus HOM05D004094 ORTHO05D004601 5.2e-21 105.5 95 55.8
Duzib093G2002 Durio zibethinus HOM05D004094 ORTHO05D004601 3.4e-20 102.8 128 44.5
CiPaw.05G222800 Carya illinoinensis HOM05D004094 ORTHO05D004601 4.4e-20 102.4 102 52.9
EL10Ac1g01050 Beta vulgaris HOM05D004094 ORTHO05D004601 2.2e-19 100.1 99 47.5
Potri.005G177000 Populus trichocarpa HOM05D004094 ORTHO05D004601 2.9e-19 99.8 106 49.1
Hund16854 Selenicereus undatus HOM05D004094 ORTHO05D004601 3.7e-19 99.4 103 45.6
TAR625G0515 Trochodendron aralioides HOM05D004094 ORTHO05D004601 8.3e-19 98.2 100 48.0
QL09p035258 Quercus lobata HOM05D004094 ORTHO05D004601 1.4e-18 97.4 108 49.1
Potri.002G084700 Populus trichocarpa HOM05D004094 ORTHO05D004601 5.4e-18 95.5 108 46.3
Gohir.A06G043800 Gossypium hirsutum HOM05D004094 ORTHO05D004601 1.2e-17 94.4 113 50.4
Manes.02G162400 Manihot esculenta HOM05D004094 ORTHO05D004601 1.2e-17 94.4 98 48.0
CSS0004297 Camellia sinensis var. sinensis HOM05D004094 ORTHO05D004601 2.7e-17 93.2 100 49.0
Gohir.D06G044700 Gossypium hirsutum HOM05D004094 ORTHO05D004601 2.7e-17 93.2 113 49.6
Sabra02G0066100 Salix brachista HOM05D004094 ORTHO05D004601 2.7e-17 93.2 106 44.3
TPR.G24027 Trifolium pratense HOM05D004094 ORTHO05D004601 3.5e-17 92.8 101 44.6
Peaxi162Scf00051g00911 Petunia axillaris HOM05D004094 ORTHO05D004601 7.8e-17 91.7 83 48.2
AUR62027887 Chenopodium quinoa HOM05D004094 ORTHO05D004601 1.0e-16 91.3 99 43.4
MBI03_g47843_MAGBIO Magnolia biondii HOM05D004094 ORTHO05D004601 1.0e-16 91.3 100 47.0
Actinidia02613 Actinidia chinensis HOM05D004094 ORTHO05D004601 1.7e-16 90.5 100 49.0
Psat3g082880 Pisum sativum HOM05D004094 ORTHO05D004601 1.7e-16 90.5 101 43.6
AL142U10030 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 2.3e-16 90.1 92 50.0
AL2G37830 Arabidopsis lyrata HOM05D004094 ORTHO05D004601 2.3e-16 90.1 92 50.0
ECA234G0673 Erigeron canadensis HOM05D004094 ORTHO05D004601 2.3e-16 90.1 107 49.5
Gorai.010G049800 Gossypium raimondii HOM05D004094 ORTHO05D004601 2.3e-16 90.1 113 47.8
Psat1g217360 Pisum sativum HOM05D004094 ORTHO05D004601 2.3e-16 90.1 102 44.1
Solyc06g060350.4 Solanum lycopersicum HOM05D004094 ORTHO05D004601 2.3e-16 90.1 109 44.0
PSO170G3655 Papaver somniferum HOM05D004094 ORTHO05D004601 3.0e-16 89.7 99 47.5
Cpa.g.sc36.56 Carica papaya HOM05D004094 ORTHO05D004601 3.9e-16 89.4 98 44.9
AUR62019047 Chenopodium quinoa HOM05D004094 ORTHO05D004601 3.9e-16 89.4 99 43.4
PGR042G1714 Punica granatum HOM05D004094 ORTHO05D004601 3.9e-16 89.4 99 43.4
Lsat_1_v5_gn_5_126560 Lactuca sativa HOM05D004094 ORTHO05D004601 5.1e-16 89.0 94 48.9
PSO782G4804 Papaver somniferum HOM05D004094 ORTHO05D004601 6.6e-16 88.6 99 46.5
Aa31LG4G7730 Aethionema arabicum HOM05D004094 ORTHO05D004601 8.6e-16 88.2 89 48.3
Migut.C01138 Erythranthe guttata HOM05D004094 ORTHO05D004601 1.1e-15 87.8 105 43.8
Rhsim06G0104600 Rhododendron simsii HOM05D004094 ORTHO05D004601 1.1e-15 87.8 84 54.8
Sed0014690 Sechium edule HOM05D004094 ORTHO05D004601 1.1e-15 87.8 101 49.5
arahy.Tifrunner.gnm1.ann1.HK9WB5 Arachis hypogaea HOM05D004094 ORTHO05D004601 1.5e-15 87.4 102 46.1
BcaB05g25063 Brassica carinata HOM05D004094 ORTHO05D004601 1.5e-15 87.4 84 52.4
Thhalv10018028m.g Eutrema salsugineum HOM05D004094 ORTHO05D004601 1.5e-15 87.4 91 49.5
Sc01g0001180 Simmondsia chinensis HOM05D004094 ORTHO05D004601 1.5e-15 87.4 100 46.0
Sopen06g020480 Solanum pennellii HOM05D004094 ORTHO05D004601 1.5e-15 87.4 109 43.1
MSTRG.1451 Avicennia marina HOM05D004094 ORTHO05D004601 1.9e-15 87.0 99 41.4
Cc00_g04280 Coffea canephora HOM05D004094 ORTHO05D004601 2.5e-15 86.7 84 50.0
COL.COLO4_35941 Corchorus olitorius HOM05D004094 ORTHO05D004601 2.5e-15 86.7 103 47.6
Carub.0002s2451 Capsella rubella HOM05D004094 ORTHO05D004601 3.3e-15 86.3 92 48.9
Glyma.06G112600 Glycine max HOM05D004094 ORTHO05D004601 3.3e-15 86.3 101 44.6
Medtr3g072400 Medicago truncatula HOM05D004094 ORTHO05D004601 3.3e-15 86.3 122 36.9
Ca_15191_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 4.3e-15 85.9 101 40.6
Lj1g0022360 Lotus japonicus HOM05D004094 ORTHO05D004601 4.3e-15 85.9 102 44.1
Sabra05G0133600 Salix brachista HOM05D004094 ORTHO05D004601 4.3e-15 85.9 146 36.3
arahy.Tifrunner.gnm1.ann1.3295S8 Arachis hypogaea HOM05D004094 ORTHO05D004601 7.3e-15 85.1 102 43.1
Glyma.14G148700 Glycine max HOM05D004094 ORTHO05D004601 9.5e-15 84.7 122 36.9
VMungo1309G1727 Vigna mungo HOM05D004094 ORTHO05D004601 9.5e-15 84.7 102 43.1
MELO3C010472.2 Cucumis melo HOM05D004094 ORTHO05D004601 1.2e-14 84.3 100 47.0
Glyma.04G250200 Glycine max HOM05D004094 ORTHO05D004601 1.2e-14 84.3 104 43.3
Hma1.2p1_0186F.1_g081720 Hydrangea macrophylla HOM05D004094 ORTHO05D004601 1.2e-14 84.3 100 46.0
Nitab4.5_0000633g0220 Nicotiana tabacum HOM05D004094 ORTHO05D004601 1.2e-14 84.3 120 43.3
Sp5g32780 Schrenkiella parvula HOM05D004094 ORTHO05D004601 1.2e-14 84.3 84 50.0
FAN24G0267 Fragaria x ananassa HOM05D004094 ORTHO05D004601 1.6e-14 84.0 88 51.1
BcaC03g15753 Brassica carinata HOM05D004094 ORTHO05D004601 2.1e-14 83.6 85 48.2
Ca_14821_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 2.1e-14 83.6 101 40.6
Lj1g0018898 Lotus japonicus HOM05D004094 ORTHO05D004601 2.1e-14 83.6 101 43.6
CANSAT64G2400 Cannabis sativa HOM05D004094 ORTHO05D004601 2.8e-14 83.2 86 53.5
CARHR071130 Cardamine hirsuta HOM05D004094 ORTHO05D004601 2.8e-14 83.2 84 50.0
FAN15G0810 Fragaria x ananassa HOM05D004094 ORTHO05D004601 3.6e-14 82.8 88 50.0
ClCG11G015680 Citrullus lanatus HOM05D004094 ORTHO05D004601 4.7e-14 82.4 100 47.0
FvH4_2g26770 Fragaria vesca HOM05D004094 ORTHO05D004601 4.7e-14 82.4 88 50.0
Psat6g041960 Pisum sativum HOM05D004094 ORTHO05D004601 4.7e-14 82.4 130 36.9
Psat5g131960 Pisum sativum HOM05D004094 ORTHO05D004601 6.2e-14 82.0 104 40.4
THA.LOC104800189 Tarenaya hassleriana HOM05D004094 ORTHO05D004601 6.2e-14 82.0 84 48.8
CsaV3_4G028330 Cucumis sativus L. HOM05D004094 ORTHO05D004601 8.1e-14 81.6 100 46.0
HanXRQChr10g0304931 Helianthus annuus HOM05D004094 ORTHO05D004601 8.1e-14 81.6 93 46.2
Sc23g0000720 Simmondsia chinensis HOM05D004094 ORTHO05D004601 8.1e-14 81.6 100 43.0
Sed0015071 Sechium edule HOM05D004094 ORTHO05D004601 1.4e-13 80.9 116 45.7
AT1G77620 Arabidopsis thaliana HOM05D004094 ORTHO05D004601 1.8e-13 80.5 92 45.7
Lalb_Chr04g0253401 Lupinus albus HOM05D004094 ORTHO05D004601 1.8e-13 80.5 100 40.0
Lalb_Chr23g0271001 Lupinus albus HOM05D004094 ORTHO05D004601 2.3e-13 80.1 101 41.6
Phvul.009G124500 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 2.3e-13 80.1 125 41.6
Nitab4.5_0004044g0030 Nicotiana tabacum HOM05D004094 ORTHO05D004601 3.1e-13 79.7 109 42.2
Oeu047946.1 Olea europaea HOM05D004094 ORTHO05D004601 3.1e-13 79.7 120 39.2
arahy.Tifrunner.gnm1.ann1.WV2Q7U Arachis hypogaea HOM05D004094 ORTHO05D004601 4.0e-13 79.3 105 41.0
ATR0684G176 Amborella trichopoda HOM05D004094 ORTHO05D004601 5.2e-13 79.0 125 40.0
arahy.Tifrunner.gnm1.ann1.1LZC07 Arachis hypogaea HOM05D004094 ORTHO05D004601 5.2e-13 79.0 104 41.3
BcaC08g47600 Brassica carinata HOM05D004094 ORTHO05D004601 5.2e-13 79.0 83 47.0
C06p51630 Brassica napus HOM05D004094 ORTHO05D004601 5.2e-13 79.0 83 47.0
BolC6t40183H Brassica oleracea HOM05D004094 ORTHO05D004601 5.2e-13 79.0 83 47.0
BolC2t09507H Brassica oleracea HOM05D004094 ORTHO05D004601 6.8e-13 78.6 88 44.3
FAN20G0223 Fragaria x ananassa HOM05D004094 ORTHO05D004601 8.9e-13 78.2 88 48.9
SalBow7G0426 Salvia bowleyana HOM05D004094 ORTHO05D004601 8.9e-13 78.2 99 41.4
Prupe.1G499900 Prunus persica HOM05D004094 ORTHO05D004601 1.2e-12 77.8 104 43.3
TPR.G25784 Trifolium pratense HOM05D004094 ORTHO05D004601 1.2e-12 77.8 95 44.2
A07p43010 Brassica napus HOM05D004094 ORTHO05D004601 1.5e-12 77.4 83 45.8
BraA07t31822Z Brassica rapa HOM05D004094 ORTHO05D004601 1.5e-12 77.4 83 45.8
DCAR_017419 Daucus carota HOM05D004094 ORTHO05D004601 1.5e-12 77.4 100 44.0
Medtr1g030410 Medicago truncatula HOM05D004094 ORTHO05D004601 3.4e-12 76.3 102 39.2
Cfa003011 Carpinus fangiana HOM05D004094 ORTHO05D004601 4.4e-12 75.9 49 63.3
Ca_12613_v3 Cicer arietinum L. HOM05D004094 ORTHO05D004601 5.8e-12 75.5 102 41.2
Lj7A339T40 Lonicera japonica HOM05D004094 ORTHO05D004601 5.8e-12 75.5 72 51.4
SGA_v2.0_scaffold24G10467 Striga asiatica HOM05D004094 ORTHO05D004601 9.9e-12 74.7 99 41.4
MD15G1351000 Malus domestica HOM05D004094 ORTHO05D004601 2.2e-11 73.6 100 42.0
Phvul.008G163600 Phaseolus vulgaris HOM05D004094 ORTHO05D004601 2.2e-11 73.6 98 40.8
SEGI_20546 Sequoiadendron giganteum HOM05D004094 ORTHO05D004601 2.2e-11 73.6 129 34.9
Actinidia23072 Actinidia chinensis HOM05D004094 ORTHO05D004601 4.9e-11 72.4 100 44.0
Cfa008660 Carpinus fangiana HOM05D004094 ORTHO05D004601 6.4e-11 72.0 49 61.2
DCAR_014092 Daucus carota HOM05D004094 ORTHO05D004601 6.4e-11 72.0 89 46.1
vmacro12538 Vaccinium macrocarpon HOM05D004094 ORTHO05D004601 6.4e-11 72.0 72 55.6
HPP92_002183 Vanilla planifolia HOM05D004094 ORTHO05D004601 6.4e-11 72.0 99 45.5
Aqoxy6G00193 Aquilegia oxysepala HOM05D004094 ORTHO05D004601 8.4e-11 71.6 84 47.6
unitig_26.g9911 Utricularia gibba HOM05D004094 ORTHO05D004601 1.4e-10 70.9 83 41.0
RcHm_v2.0_Chr6g0295641 Rosa chinensis HOM05D004094 ORTHO05D004601 2.4e-10 70.1 86 44.2
Os03g0262300 Oryza sativa ssp. japonica HOM05D004094 ORTHO05D004601 4.1e-10 69.3 83 42.2
VMungo0647G1825 Vigna mungo HOM05D004094 ORTHO05D004601 4.1e-10 69.3 83 42.2
BraA02t07168Z Brassica rapa HOM05D004094 ORTHO05D004601 5.4e-10 68.9 73 46.6
Zm00001eb398150 Zea mays HOM05D004094 ORTHO05D004601 1.6e-09 67.4 84 44.0
CDE06G1261 Ceratophyllum demersum HOM05D004094 ORTHO05D004601 2.7e-09 66.6 102 36.3
C02p34910 Brassica napus HOM05D004094 ORTHO05D004601 3.5e-09 66.2 73 45.2
Pp3c13_19570 Physcomitrium patens HOM05D004094 ORTHO05D004601 1.3e-08 64.3 92 41.3
Dinv07237 Davidia involucrata HOM05D004094 ORTHO05D004601 2.3e-08 63.5 100 42.0
AagrBONN_evm.TU.Sc2ySwM_368.377 Anthoceros agrestis HOM05D004094 ORTHO05D004601 1.1e-07 61.2 92 35.9
Pp3c12_8350 Physcomitrium patens HOM05D004094 ORTHO05D004601 5.6e-07 58.9 83 38.6


User provided reference genes

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