Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.3e-99 365.5 184 100.0
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.5e-90 336.3 184 89.7
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 6.2e-76 287.7 182 76.4
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.1e-75 287.0 182 77.5
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.4e-75 286.6 182 77.5
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 1.8e-75 286.2 184 76.6
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 3.1e-75 285.4 182 76.9
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 5.2e-75 284.6 184 76.1
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 2.0e-74 282.7 180 78.3
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 9.9e-74 280.4 184 75.0
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 2.7e-71 272.3 180 71.1
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 3.5e-71 271.9 184 71.2
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 1.3e-70 270.0 181 72.9
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.3e-70 270.0 181 72.4
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 1.3e-70 270.0 180 71.1
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 1.7e-70 269.6 182 71.4
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 3.0e-70 268.9 181 73.5
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 3.9e-70 268.5 181 73.5
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 3.9e-70 268.5 181 72.4
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 5.1e-70 268.1 182 71.4
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 5.1e-70 268.1 182 71.4
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 8.6e-70 267.3 184 70.1
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 1.5e-69 266.5 179 69.8
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 1.5e-69 266.5 182 71.4
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 1.9e-69 266.2 180 70.6
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 4.3e-69 265.0 182 70.9
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 4.3e-69 265.0 181 71.3
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 5.6e-69 264.6 182 71.4
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 9.6e-69 263.8 182 70.3
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 9.6e-69 263.8 175 73.7
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 1.2e-68 263.5 185 70.8
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 4.7e-68 261.5 182 69.2
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 4.7e-68 261.5 183 71.0
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 4.7e-68 261.5 178 71.9
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 6.2e-68 261.2 182 69.2
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 1.1e-67 260.4 180 69.4
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.4e-67 260.0 183 71.0
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.4e-67 260.0 180 66.7
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 1.4e-67 260.0 182 69.8
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 1.8e-67 259.6 184 65.8
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 2.4e-67 259.2 180 70.6
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 2.4e-67 259.2 182 69.2
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 2.4e-67 259.2 182 69.2
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 2.4e-67 259.2 182 69.2
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 3.1e-67 258.8 181 69.6
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 5.2e-67 258.1 180 68.9
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 6.8e-67 257.7 177 70.6
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 6.8e-67 257.7 183 67.8
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 8.9e-67 257.3 182 70.3
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 8.9e-67 257.3 183 67.2
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 1.5e-66 256.5 182 68.1
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.5e-66 256.5 182 69.8
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.5e-66 256.5 182 69.8
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 2.0e-66 256.1 181 67.4
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.6e-66 255.8 181 69.6
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 2.6e-66 255.8 175 70.9
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 3.4e-66 255.4 183 67.8
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 4.4e-66 255.0 183 68.3
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 5.8e-66 254.6 182 68.7
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 5.8e-66 254.6 182 68.7
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 5.8e-66 254.6 176 68.8
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 7.6e-66 254.2 182 66.5
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 4.9e-65 251.5 182 68.1
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 4.9e-65 251.5 177 68.4
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 4.9e-65 251.5 176 67.0
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 6.4e-65 251.1 182 68.1
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.1e-64 250.4 182 67.0
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 1.4e-64 250.0 182 68.1
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 1.4e-64 250.0 182 68.1
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 2.4e-64 249.2 182 65.9
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 2.4e-64 249.2 179 67.0
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 3.2e-64 248.8 163 73.0
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 7.1e-64 247.7 184 64.7
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 7.1e-64 247.7 182 64.3
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 9.3e-64 247.3 184 65.8
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 1.6e-63 246.5 183 64.5
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 2.1e-63 246.1 182 64.3
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 4.6e-63 245.0 180 64.4
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 4.6e-63 245.0 180 66.7
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 6.0e-63 244.6 182 62.1
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 1.3e-62 243.4 182 63.7
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 1.7e-62 243.0 183 62.8
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 3.9e-62 241.9 180 62.8
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 3.3e-61 238.8 178 67.4
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 5.6e-61 238.0 178 65.2
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 9.6e-61 237.3 176 64.2
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 8.1e-60 234.2 178 64.0
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.1e-59 233.8 178 64.0
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 1.4e-59 233.4 182 62.6
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.1e-59 232.3 174 62.1
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 5.3e-59 231.5 180 62.2
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 2.0e-58 229.6 171 64.9
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 1.3e-57 226.9 182 58.8
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 2.2e-57 226.1 183 60.7
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 2.9e-57 225.7 168 64.3
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 2.9e-57 225.7 191 60.2
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 6.4e-57 224.6 182 61.0
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 2.5e-53 212.6 176 59.1
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 7.3e-53 211.1 202 52.5
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.2e-50 203.8 180 54.4
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.0e-50 203.0 201 50.7
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 1.1e-48 197.2 153 66.7
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 1.4e-48 196.8 196 51.5
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 1.9e-48 196.4 152 65.8
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 1.8e-46 189.9 135 67.4
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 5.6e-45 184.9 175 53.7
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 1.3e-41 173.7 178 50.0
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 4.9e-41 171.8 117 71.8
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 8.4e-41 171.0 141 60.3
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 5.1e-38 161.8 169 47.3
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 5.7e-37 158.3 108 70.4
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 4.8e-36 155.2 173 46.8
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 8.2e-36 154.5 192 45.8
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 1.5e-34 150.2 107 69.2
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 2.0e-34 149.8 181 43.6
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 5.8e-34 148.3 175 44.0
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.5e-32 142.9 183 43.2
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 4.5e-26 122.1 159 38.4
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 5.0e-25 118.6 93 59.1
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.5e-24 116.3 132 44.7
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 5.5e-24 115.2 95 57.9
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.4e-18 95.9 105 50.5
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 6.5e-17 91.7 83 54.2
Glyma.12G090400 Glycine max HOM05D006357 ORTHO05D007925 1.0e-09 67.8 67 47.8
HPP92_019617 Vanilla planifolia HOM05D003111 ORTHO05D003502 8.5e-09 64.7 148 28.4
HPP92_019623 Vanilla planifolia HOM05D003111 ORTHO05D003502 8.5e-09 64.7 148 28.4
Pp3c18_21320 Physcomitrium patens HOM05D003111 ORTHO05D003502 9.4e-08 61.2 163 30.7


User provided reference genes

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