Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G1696 Tripterygium wilfordii HOM05D001401 ORTHO05D006368 2.2e-158 562.4 305 100.0
TWI31G0569 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 1.8e-125 453.0 307 82.7
TWI79G1069 Tripterygium wilfordii HOM05D001401 ORTHO05D002222 7.7e-116 421.0 305 79.7
Manes.15G147100 Manihot esculenta HOM05D001401 ORTHO05D006368 8.1e-81 304.7 322 51.9
Potri.004G149900 Populus trichocarpa HOM05D001401 ORTHO05D006368 4.6e-76 288.9 319 52.0
Potri.009G111000 Populus trichocarpa HOM05D001401 ORTHO05D006368 1.7e-75 287.0 319 51.4
Sabra09G0084600 Salix brachista HOM05D001401 ORTHO05D006368 6.6e-75 285.0 319 52.7
Haze_02430 Corylus avellana HOM05D001401 ORTHO05D006368 1.3e-73 280.8 312 58.0
Thecc.02G031200 Theobroma cacao HOM05D001401 ORTHO05D006368 1.6e-73 280.4 329 52.3
Manes.17G098401 Manihot esculenta HOM05D001401 ORTHO05D006368 2.8e-73 279.6 320 48.8
QL11p037824 Quercus lobata HOM05D001401 ORTHO05D006368 6.9e-72 275.0 350 48.0
FAN20G2914 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.8e-70 269.2 306 49.7
RcHm_v2.0_Chr6g0262181 Rosa chinensis HOM05D001401 ORTHO05D006368 8.4e-70 268.1 306 49.0
Gohir.A01G181100 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.9e-69 266.9 313 49.8
MD05G1071000 Malus domestica HOM05D001401 ORTHO05D006368 1.9e-69 266.9 309 50.2
TAR628G1386 Trochodendron aralioides HOM05D001401 ORTHO05D006368 1.9e-69 266.9 310 47.7
CANSAT25G1485 Cannabis sativa HOM05D001401 ORTHO05D006368 3.2e-69 266.2 306 54.6
vmacro02151 Vaccinium macrocarpon HOM05D001401 ORTHO05D006368 7.1e-69 265.0 306 48.7
CiPaw.05G060100 Carya illinoinensis HOM05D001401 ORTHO05D006368 9.3e-69 264.6 316 51.9
Gohir.D01G172200 Gossypium hirsutum HOM05D001401 ORTHO05D006368 1.6e-68 263.8 313 49.8
Gorai.002G213800 Gossypium raimondii HOM05D001401 ORTHO05D006368 1.6e-68 263.8 313 50.2
Ciclev10028944m.g Citrus clementina HOM05D001401 ORTHO05D006368 2.1e-68 263.5 313 48.6
Duzib132G0928 Durio zibethinus HOM05D001401 ORTHO05D006368 2.7e-68 263.1 327 50.2
Duzib248G1632 Durio zibethinus HOM05D001401 ORTHO05D006368 2.7e-68 263.1 343 49.0
Phvul.011G048500 Phaseolus vulgaris HOM05D001401 ORTHO05D006368 6.0e-68 261.9 319 48.9
TAR381G0019 Trochodendron aralioides HOM05D001401 ORTHO05D006368 6.0e-68 261.9 309 47.9
Prupe.8G107000 Prunus persica HOM05D001401 ORTHO05D006368 2.3e-67 260.0 309 54.0
Hma1.2p1_0584F.1_g183440 Hydrangea macrophylla HOM05D001401 ORTHO05D006368 8.7e-67 258.1 308 49.4
Sabra04G0099700 Salix brachista HOM05D001401 ORTHO05D006368 1.5e-66 257.3 361 44.6
CsaV3_2G014470 Cucumis sativus L. HOM05D001401 ORTHO05D006368 2.5e-66 256.5 311 48.6
QL11p040047 Quercus lobata HOM05D001401 ORTHO05D006368 4.3e-66 255.8 211 62.6
MELO3C021952.2 Cucumis melo HOM05D001401 ORTHO05D002222 1.3e-65 254.2 309 47.2
Cpa.g.sc62.97 Carica papaya HOM05D001401 ORTHO05D006368 2.8e-65 253.1 326 47.2
VMungo1127G1180 Vigna mungo HOM05D001401 ORTHO05D006368 3.7e-65 252.7 318 47.5
ClCG09G017860 Citrullus lanatus HOM05D001401 ORTHO05D006368 8.1e-65 251.5 314 53.2
Atru.chr5.2919 Acer truncatum HOM05D001401 ORTHO05D006368 4.0e-64 249.2 307 50.2
Aqoxy6G00969 Aquilegia oxysepala HOM05D001401 ORTHO05D006368 1.5e-63 247.3 309 46.9
Sed0001686 Sechium edule HOM05D001401 ORTHO05D006368 2.6e-63 246.5 311 46.6
Glyma.12G046700 Glycine max HOM05D001401 ORTHO05D006368 4.5e-63 245.7 317 46.4
FAN24G0528 Fragaria x ananassa HOM05D001401 ORTHO05D006368 7.6e-63 245.0 306 52.0
Dinv42099 Davidia involucrata HOM05D001401 ORTHO05D006368 1.3e-62 244.2 312 50.6
Cfa021516 Carpinus fangiana HOM05D001401 ORTHO05D006368 2.2e-62 243.4 213 62.0
FvH4_2g07780 Fragaria vesca HOM05D001401 ORTHO05D006368 3.8e-62 242.7 306 51.6
Sed0023769 Sechium edule HOM05D001401 ORTHO05D006368 3.8e-62 242.7 313 48.9
Hund06213 Selenicereus undatus HOM05D001401 ORTHO05D006368 3.2e-61 239.6 308 46.4
Nn5g29458 Nelumbo nucifera HOM05D001401 ORTHO05D006368 4.2e-61 239.2 311 45.7
Glyma.11G121600 Glycine max HOM05D001401 ORTHO05D006368 5.5e-61 238.8 319 47.0
Psat7g205720 Pisum sativum HOM05D001401 ORTHO05D006368 1.2e-60 237.7 312 46.8
arahy.Tifrunner.gnm1.ann1.U2ETAV Arachis hypogaea HOM05D001401 ORTHO05D006368 2.1e-60 236.9 318 45.3
Lalb_Chr03g0025871 Lupinus albus HOM05D001401 ORTHO05D006368 3.5e-60 236.1 312 45.5
THA.LOC104807334 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 3.5e-60 236.1 314 43.3
Oeu034083.1 Olea europaea HOM05D001401 ORTHO05D006368 4.6e-60 235.7 310 44.5
Lj3g0025450 Lotus japonicus HOM05D001401 ORTHO05D006368 6.0e-60 235.3 319 44.8
Rhsim11G0172600 Rhododendron simsii HOM05D000554 ORTHO05D002829 7.9e-60 235.0 348 42.8
CSS0017552 Camellia sinensis var. sinensis HOM05D001401 ORTHO05D006368 1.3e-59 234.2 315 50.2
Lalb_Chr01g0002831 Lupinus albus HOM05D001401 ORTHO05D006368 3.0e-59 233.0 319 44.5
COL.COLO4_17797 Corchorus olitorius HOM05D000370 ORTHO05D001335 3.9e-59 232.6 297 46.1
Dinv23564 Davidia involucrata HOM05D001401 ORTHO05D006368 6.7e-59 231.9 309 48.5
Medtr4g068880 Medicago truncatula HOM05D001401 ORTHO05D006368 8.7e-59 231.5 312 47.1
DCAR_029001 Daucus carota HOM05D001401 ORTHO05D006368 1.9e-58 230.3 307 45.9
Actinidia27915 Actinidia chinensis HOM05D001401 ORTHO05D006368 5.6e-58 228.8 325 47.1
Carub.0003s2988 Capsella rubella HOM05D001401 ORTHO05D006368 7.4e-58 228.4 316 43.7
Cfa021524 Carpinus fangiana HOM05D001401 ORTHO05D002222 1.3e-57 227.6 206 60.7
Nitab4.5_0003816g0020 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.3e-57 227.6 308 44.5
PSO700G0268 Papaver somniferum HOM05D001401 ORTHO05D006368 1.3e-57 227.6 307 44.6
AT2G16070 Arabidopsis thaliana HOM05D001401 ORTHO05D006368 3.7e-57 226.1 310 45.2
Actinidia00491 Actinidia chinensis HOM05D001401 ORTHO05D006368 4.8e-57 225.7 307 44.0
Hund00301 Selenicereus undatus HOM05D001401 ORTHO05D006368 6.2e-57 225.3 308 43.8
Aa31LG8G13520 Aethionema arabicum HOM05D001401 ORTHO05D006368 8.2e-57 224.9 309 45.0
PSO170G2675 Papaver somniferum HOM05D001401 ORTHO05D006368 8.2e-57 224.9 307 44.3
Sp3g29340 Schrenkiella parvula HOM05D001401 ORTHO05D006368 1.1e-56 224.6 315 42.9
Lsat_1_v5_gn_5_118161 Lactuca sativa HOM05D001401 ORTHO05D006368 1.8e-56 223.8 308 44.5
Ca_20836_v3 Cicer arietinum L. HOM05D001401 ORTHO05D006368 6.9e-56 221.9 311 43.4
Eucgr.I01238 Eucalyptus grandis HOM05D001401 ORTHO05D006368 7.6e-55 218.4 310 44.2
Thhalv10022794m.g Eutrema salsugineum HOM05D001401 ORTHO05D006368 2.2e-54 216.9 309 43.0
FAN15G1840 Fragaria x ananassa HOM05D001401 ORTHO05D006368 3.8e-54 216.1 207 54.6
Peaxi162Scf00016g01140 Petunia axillaris HOM05D001401 ORTHO05D006368 3.8e-54 216.1 310 41.0
MSTRG.20113 Avicennia marina HOM05D001401 ORTHO05D006368 4.9e-54 215.7 315 45.7
CsaV3_7G010190 Cucumis sativus L. HOM05D001401 ORTHO05D006368 4.9e-54 215.7 310 47.1
SalBow6G2648 Salvia bowleyana HOM05D001401 ORTHO05D006368 4.9e-54 215.7 308 45.5
A07p04770 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-53 214.5 309 44.3
BraA07t28264Z Brassica rapa HOM05D001401 ORTHO05D006368 1.1e-53 214.5 309 44.3
Nitab4.5_0004280g0010 Nicotiana tabacum HOM05D001401 ORTHO05D006368 1.1e-53 214.5 319 42.9
ClCG02G005370 Citrullus lanatus HOM05D001401 ORTHO05D006368 2.5e-53 213.4 311 46.9
MELO3C018410.2 Cucumis melo HOM05D001401 ORTHO05D006368 4.2e-53 212.6 312 46.5
TPR.G28096 Trifolium pratense HOM05D001401 ORTHO05D006368 4.2e-53 212.6 313 40.9
Cc02_g18020 Coffea canephora HOM05D001401 ORTHO05D006368 5.5e-53 212.2 310 42.6
Lj9P365T45 Lonicera japonica HOM05D001401 ORTHO05D006368 1.2e-52 211.1 209 55.0
Hund00294 Selenicereus undatus HOM05D001401 ORTHO05D006368 2.1e-52 210.3 300 43.0
AUR62011378 Chenopodium quinoa HOM05D001401 ORTHO05D006368 3.5e-52 209.5 306 40.5
CARHR106370 Cardamine hirsuta HOM05D001401 ORTHO05D006368 4.6e-52 209.1 309 41.1
C07p07640 Brassica napus HOM05D001401 ORTHO05D006368 3.0e-51 206.5 310 42.6
BolC7t41185H Brassica oleracea HOM05D001401 ORTHO05D006368 3.0e-51 206.5 310 42.6
AUR62016681 Chenopodium quinoa HOM05D001401 ORTHO05D006368 5.1e-51 205.7 306 40.2
MSTRG.5386 Avicennia marina HOM05D001401 ORTHO05D006368 1.5e-50 204.1 312 42.0
ECA234G2696 Erigeron canadensis HOM05D000324 ORTHO05D001014 2.5e-50 203.4 305 42.0
BcaC01g03041 Brassica carinata HOM05D001401 ORTHO05D006368 3.3e-50 203.0 316 41.8
C03p56790 Brassica napus HOM05D001401 ORTHO05D006368 3.3e-50 203.0 316 41.8
BolC3t17961H Brassica oleracea HOM05D001401 ORTHO05D006368 3.3e-50 203.0 316 41.8
Medtr0026s0200 Medicago truncatula HOM05D001401 ORTHO05D006368 7.4e-50 201.8 216 49.5
Solyc01g109260.3 Solanum lycopersicum HOM05D001401 ORTHO05D006368 9.7e-50 201.4 307 40.1
Sopen01g051420 Solanum pennellii HOM05D001401 ORTHO05D006368 9.7e-50 201.4 307 40.1
PGSC0003DMG400025176 Solanum tuberosum HOM05D001401 ORTHO05D006368 1.3e-49 201.1 307 40.4
PSO541G5534 Papaver somniferum HOM05D001401 ORTHO05D006368 2.8e-49 199.9 314 40.1
Sc08g0000270 Simmondsia chinensis HOM05D001401 ORTHO05D006368 2.8e-49 199.9 312 39.7
THA.LOC104820173 Tarenaya hassleriana HOM05D001401 ORTHO05D006368 4.8e-49 199.1 316 39.2
CAN.G322.101 Capsicum annuum HOM05D001401 ORTHO05D006368 6.3e-49 198.7 310 41.0
PSO675G0936 Papaver somniferum HOM05D001401 ORTHO05D006368 1.1e-48 198.0 314 40.4
Migut.N01216 Erythranthe guttata HOM05D001401 ORTHO05D006368 1.8e-48 197.2 311 40.8
Ah.01g006390 Amaranthus hybridus HOM05D001401 ORTHO05D006368 3.1e-48 196.4 306 40.2
Sed0001319 Sechium edule HOM05D001401 ORTHO05D006368 3.1e-48 196.4 312 40.1
Oeu027593.1 Olea europaea HOM05D001574 ORTHO05D006368 6.9e-48 195.3 280 42.1
ATR0733G254 Amborella trichopoda HOM05D001401 ORTHO05D006368 2.0e-47 193.7 322 39.1
BcaB08g34633 Brassica carinata HOM05D001401 ORTHO05D006368 6.5e-46 188.7 315 38.7
MBI16_g36202_MAGBIO Magnolia biondii HOM05D001401 ORTHO05D002222 6.5e-46 188.7 272 44.1
A03p45690 Brassica napus HOM05D001401 ORTHO05D006368 8.5e-46 188.3 307 41.0
PGR042G1488 Punica granatum HOM05D001401 ORTHO05D006368 1.4e-45 187.6 309 45.0
HanXRQChr10g0307141 Helianthus annuus HOM05D001401 ORTHO05D006368 7.2e-45 185.3 308 38.3
BraA03t13701Z Brassica rapa HOM05D001401 ORTHO05D006368 9.3e-45 184.9 307 40.7
BcaC06g36113 Brassica carinata HOM05D001401 ORTHO05D006368 1.6e-44 184.1 305 39.7
Migut.B00279 Erythranthe guttata HOM05D001401 ORTHO05D006368 2.1e-44 183.7 306 39.9
CDE01G0160 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 5.7e-42 175.6 309 40.5
SGA_v2.0_scaffold58G20583 Striga asiatica HOM05D001401 ORTHO05D006368 6.3e-41 172.2 308 39.6
A09p10890 Brassica napus HOM05D001401 ORTHO05D006368 1.1e-40 171.4 310 37.4
EL10Ac9g21774 Beta vulgaris HOM05D001401 ORTHO05D002222 2.6e-39 166.8 278 45.7
Os07g0123300 Oryza sativa ssp. japonica HOM05D001401 ORTHO05D006368 3.2e-37 159.8 250 34.8
Ah.01g019700 Amaranthus hybridus HOM05D001401 ORTHO05D002222 2.0e-34 150.6 358 31.3
CDE04G2456 Ceratophyllum demersum HOM05D001401 ORTHO05D006368 8.2e-33 145.2 307 35.2
GSVIVG01031902001 Vitis vinifera HOM05D001401 ORTHO05D006368 1.4e-32 144.4 172 51.2
SEGI_00142 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 3.2e-29 133.3 322 31.7
Nn1g05138 Nelumbo nucifera HOM05D001401 ORTHO05D006368 1.5e-26 124.4 166 47.0
C09p12860 Brassica napus HOM05D001401 ORTHO05D006368 4.4e-26 122.9 304 32.2
BolC9t54175H Brassica oleracea HOM05D001401 ORTHO05D006368 4.4e-26 122.9 304 32.2
Mapoly0001s0328 Marchantia polymorpha HOM05D001401 ORTHO05D006368 1.1e-24 118.2 373 30.0
BraA09t36729Z Brassica rapa HOM05D001401 ORTHO05D006368 5.3e-24 115.9 156 44.9
Zm00001eb299190 Zea mays HOM05D001401 ORTHO05D006368 3.8e-22 109.8 329 27.1
BcaNung01772 Brassica carinata HOM05D001401 ORTHO05D006368 2.5e-21 107.1 170 42.9
TAR623G1717 Trochodendron aralioides HOM05D001401 ORTHO05D006368 5.5e-21 105.9 88 56.8
Lj1C312T0 Lonicera japonica HOM05D001401 ORTHO05D006368 9.4e-21 105.1 127 47.2
BcaB07g31630 Brassica carinata HOM05D006912 ORTHO05D008686 1.3e-17 94.7 151 38.4
Pp3c2_5300 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.4e-16 91.3 354 26.3
Pp3c1_32220 Physcomitrium patens HOM05D001401 ORTHO05D006368 7.0e-16 89.0 348 27.9
Pp3c17_18860 Physcomitrium patens HOM05D001401 ORTHO05D006368 1.7e-14 84.3 357 27.5
Pp3c22_17090 Physcomitrium patens HOM05D001401 ORTHO05D006368 4.2e-13 79.7 382 21.7
CDE02G3784 Ceratophyllum demersum HOM05D001401 ORTHO05D002222 2.7e-12 77.0 121 39.7
unitig_21.g20770 Utricularia gibba HOM05D000370 ORTHO05D001335 8.0e-12 75.5 305 29.5
SEGI_14403 Sequoiadendron giganteum HOM05D001401 ORTHO05D006368 2.3e-11 73.9 160 33.8
AagrBONN_evm.TU.Sc2ySwM_228.2503 Anthoceros agrestis HOM05D001401 ORTHO05D006368 4.0e-11 73.2 335 26.6
Pp3c19_14090 Physcomitrium patens HOM05D001401 ORTHO05D006368 9.8e-10 68.6 390 23.6
FAN15G3283 Fragaria x ananassa HOM05D001401 ORTHO05D006368 1.6e-07 61.2 82 43.9
BcaC04g23035 Brassica carinata HOM05D001401 ORTHO05D006368 3.5e-07 60.1 86 41.9
SEGI_25677 Sequoiadendron giganteum HOM05D004891 ORTHO05D005997 1.7e-06 57.8 160 28.1
A10p10800 Brassica napus HOM05D004891 ORTHO05D005997 2.9e-06 57.0 151 32.5
MD07G1284300 Malus domestica HOM05D004891 ORTHO05D005997 5.0e-06 56.2 191 30.4
SalBow1G1061 Salvia bowleyana HOM05D001999 ORTHO05D001994 8.6e-06 55.5 51 58.8


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