Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G1612 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 6.0e-155 550.8 284 100.0
TWI79G1491 Tripterygium wilfordii HOM05D003937 ORTHO05D004583 8.5e-117 424.1 264 84.5
Manes.04G067300 Manihot esculenta HOM05D003937 ORTHO05D004583 8.3e-88 327.8 282 63.8
Cfa005351 Carpinus fangiana HOM05D003937 ORTHO05D004583 1.7e-85 320.1 266 63.5
Haze_02016 Corylus avellana HOM05D003937 ORTHO05D004583 1.5e-84 317.0 264 64.4
Thecc.02G044800 Theobroma cacao HOM05D003937 ORTHO05D004583 2.3e-82 309.7 282 59.9
Duzib132G1231 Durio zibethinus HOM05D003937 ORTHO05D004583 1.2e-81 307.4 282 59.2
Duzib052G0838 Durio zibethinus HOM05D003937 ORTHO05D004583 2.4e-79 299.7 282 59.9
Glyma.06G000500 Glycine max HOM05D003937 ORTHO05D004583 2.4e-79 299.7 288 57.3
CiPaw.05G091700 Carya illinoinensis HOM05D003937 ORTHO05D004583 4.1e-79 298.9 279 60.6
QL11p055606 Quercus lobata HOM05D003937 ORTHO05D004583 1.2e-78 297.4 282 57.8
QL11p055907 Quercus lobata HOM05D003937 ORTHO05D004583 1.0e-77 294.3 282 57.4
Atru.chr5.3549 Acer truncatum HOM05D003937 ORTHO05D004583 3.0e-77 292.7 282 58.9
Glyma.04G000700 Glycine max HOM05D003937 ORTHO05D004583 3.9e-77 292.4 288 56.6
Gohir.A01G174900 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.5e-76 290.4 282 56.7
Gohir.D02G231300 Gossypium hirsutum HOM05D003937 ORTHO05D004583 4.3e-76 288.9 284 58.8
Cpa.g.sc20.204 Carica papaya HOM05D003937 ORTHO05D004583 7.3e-76 288.1 283 58.7
Ciclev10028873m.g Citrus clementina HOM05D003937 ORTHO05D004583 6.2e-75 285.0 282 57.8
Gohir.D01G166000 Gossypium hirsutum HOM05D003937 ORTHO05D004583 8.1e-75 284.6 282 56.4
Gorai.002G206500 Gossypium raimondii HOM05D003937 ORTHO05D004583 8.1e-75 284.6 282 56.4
Phvul.006G042500 Phaseolus vulgaris HOM05D003937 ORTHO05D004583 1.1e-74 284.3 263 58.9
COL.COLO4_17933 Corchorus olitorius HOM05D003937 ORTHO05D004583 2.3e-74 283.1 282 58.5
CSS0036568 Camellia sinensis var. sinensis HOM05D003937 ORTHO05D004583 3.1e-74 282.7 282 57.8
TPR.G38537 Trifolium pratense HOM05D003937 ORTHO05D004583 5.2e-74 282.0 283 56.2
Gorai.005G258900 Gossypium raimondii HOM05D003937 ORTHO05D004583 2.6e-73 279.6 284 57.0
Dinv41880 Davidia involucrata HOM05D001927 ORTHO05D001972 4.4e-73 278.9 285 56.5
Gohir.A03G209600 Gossypium hirsutum HOM05D003937 ORTHO05D004583 1.7e-72 276.9 284 57.4
Medtr3g118500 Medicago truncatula HOM05D003937 ORTHO05D004583 1.7e-72 276.9 282 54.6
VMungo0540G0354 Vigna mungo HOM05D003937 ORTHO05D004583 2.1e-70 270.0 269 57.2
Hma1.2p1_0271F.1_g108900 Hydrangea macrophylla HOM05D003937 ORTHO05D004583 4.6e-70 268.9 288 55.9
TAR625G1504 Trochodendron aralioides HOM05D003937 ORTHO05D004583 1.0e-69 267.7 280 52.5
arahy.Tifrunner.gnm1.ann1.G18Z51 Arachis hypogaea HOM05D003937 ORTHO05D004583 3.9e-69 265.8 275 56.4
Potri.009G166100 Populus trichocarpa HOM05D003937 ORTHO05D004583 3.9e-69 265.8 285 55.8
ClCG02G009960 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.5e-68 263.8 282 52.8
Prupe.8G178200 Prunus persica HOM05D003937 ORTHO05D004583 2.8e-67 259.6 290 52.8
CANSAT25G1327 Cannabis sativa HOM05D003937 ORTHO05D004583 3.1e-66 256.1 281 53.4
arahy.Tifrunner.gnm1.ann1.388DF8 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.0e-65 253.4 263 56.3
Nn5g30963 Nelumbo nucifera HOM05D003937 ORTHO05D004583 7.6e-65 251.5 288 52.4
TAR381G0291 Trochodendron aralioides HOM05D003937 ORTHO05D004583 4.2e-63 245.7 283 51.2
Lj1g0000413 Lotus japonicus HOM05D003937 ORTHO05D004583 1.2e-62 244.2 283 50.5
Dinv14164 Davidia involucrata HOM05D001927 ORTHO05D001972 2.1e-62 243.4 287 51.9
CsaV3_6G010160 Cucumis sativus L. HOM05D003937 ORTHO05D004583 2.7e-62 243.0 282 49.6
EL10Ac9g21245 Beta vulgaris HOM05D003937 ORTHO05D004583 6.0e-62 241.9 282 49.3
Rhsim05G0047600 Rhododendron simsii HOM05D003937 ORTHO05D004583 9.6e-60 234.6 286 52.8
Sed0010938 Sechium edule HOM05D003937 ORTHO05D004583 6.2e-59 231.9 282 49.6
MD10G1139500 Malus domestica HOM05D003937 ORTHO05D004583 2.4e-58 229.9 268 52.2
Potri.004G205200 Populus trichocarpa HOM05D003937 ORTHO05D004583 3.1e-58 229.6 284 51.8
Ca_16692_v3 Cicer arietinum L. HOM05D003937 ORTHO05D004583 1.2e-57 227.6 244 53.3
PGR142G1962 Punica granatum HOM05D003937 ORTHO05D004583 1.7e-56 223.8 289 48.4
AUR62011702 Chenopodium quinoa HOM05D003937 ORTHO05D004583 8.4e-56 221.5 282 47.9
AUR62012919 Chenopodium quinoa HOM05D003937 ORTHO05D004583 2.4e-55 219.9 282 46.8
MD05G1134400 Malus domestica HOM05D003937 ORTHO05D004583 1.6e-54 217.2 266 51.9
Actinidia32012 Actinidia chinensis HOM05D003937 ORTHO05D004583 3.9e-53 212.6 287 49.8
Eucgr.I01517 Eucalyptus grandis HOM05D003937 ORTHO05D004583 3.9e-53 212.6 283 49.1
Hund06165 Selenicereus undatus HOM05D003937 ORTHO05D004583 4.0e-50 202.6 266 47.4
Sc18g0006030 Simmondsia chinensis HOM05D003937 ORTHO05D004583 9.0e-50 201.4 275 44.7
vmacro17300 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 2.6e-49 199.9 286 46.9
arahy.Tifrunner.gnm1.ann1.13SVP6 Arachis hypogaea HOM05D003937 ORTHO05D004583 2.9e-48 196.4 208 53.8
Lalb_Chr08g0246851 Lupinus albus HOM05D003937 ORTHO05D004583 3.2e-47 193.0 256 49.2
arahy.Tifrunner.gnm1.ann1.BKYH70 Arachis hypogaea HOM05D003937 ORTHO05D004583 7.1e-47 191.8 262 46.2
Sabra04G0138500 Salix brachista HOM05D003937 ORTHO05D004583 7.4e-44 181.8 247 49.8
Peaxi162Scf00362g00245 Petunia axillaris HOM05D003937 ORTHO05D004583 2.1e-43 180.3 285 42.5
SalBow1G5464 Salvia bowleyana HOM05D003937 ORTHO05D004583 2.1e-43 180.3 285 45.3
Nitab4.5_0011212g0050 Nicotiana tabacum HOM05D003937 ORTHO05D004583 1.8e-42 177.2 272 41.2
PGSC0003DMG400014661 Solanum tuberosum HOM05D003937 ORTHO05D004583 6.9e-42 175.3 285 42.5
PSO541G3051 Papaver somniferum HOM05D003937 ORTHO05D004583 4.5e-41 172.6 263 40.7
arahy.Tifrunner.gnm1.ann1.5851ZQ Arachis hypogaea HOM05D003937 ORTHO05D004583 1.3e-40 171.0 226 46.0
PSO675G5999 Papaver somniferum HOM05D003937 ORTHO05D004583 4.9e-40 169.1 264 42.0
Migut.B00012 Erythranthe guttata HOM05D003937 ORTHO05D004583 1.4e-39 167.5 306 42.5
arahy.Tifrunner.gnm1.ann1.2P21EX Arachis hypogaea HOM05D003937 ORTHO05D004583 1.9e-39 167.2 248 44.4
CAN.G1725.8 Capsicum annuum HOM05D003937 ORTHO05D004583 1.9e-39 167.2 284 41.5
Aqoxy6G01687 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 3.2e-39 166.4 283 42.0
Sopen01g054230 Solanum pennellii HOM05D003937 ORTHO05D004583 3.2e-39 166.4 285 40.7
Nitab4.5_0000783g0190 Nicotiana tabacum HOM05D003937 ORTHO05D004583 9.3e-39 164.9 266 39.8
Solyc01g112180.4 Solanum lycopersicum HOM05D003937 ORTHO05D004583 9.3e-39 164.9 285 40.4
Aqoxy5G01031 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 3.5e-38 162.9 262 43.1
MSTRG.16955 Avicennia marina HOM05D003937 ORTHO05D004583 1.0e-37 161.4 290 40.7
DCAR_015663 Daucus carota HOM05D003937 ORTHO05D004583 1.9e-36 157.1 263 42.2
HanXRQChr12g0374421 Helianthus annuus HOM05D003937 ORTHO05D004583 7.4e-36 155.2 279 41.9
Oeu003435.2 Olea europaea HOM05D003937 ORTHO05D004583 9.0e-34 148.3 233 44.2
RcHm_v2.0_Chr6g0280681 Rosa chinensis HOM05D003937 ORTHO05D004583 1.2e-33 147.9 615 25.7
ECA233G2935 Erigeron canadensis HOM05D003937 ORTHO05D004583 8.5e-32 141.7 286 42.3
FvH4_2g16620 Fragaria vesca HOM05D003937 ORTHO05D004583 1.4e-31 141.0 128 63.3
FAN15G3453 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.4e-31 141.0 128 63.3
FAN24G0691 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.4e-31 141.0 128 63.3
FAN27G2747 Fragaria x ananassa HOM05D003937 ORTHO05D004583 1.9e-31 140.6 128 62.5
MSTRG.22102 Avicennia marina HOM05D003937 ORTHO05D004583 2.5e-31 140.2 281 38.8
FAN20G0177 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.5e-31 139.0 128 61.7
Prupe.5G011500 Prunus persica HOM05D003937 ORTHO05D004583 3.0e-29 133.3 282 37.2
Actinidia37917 Actinidia chinensis HOM05D003937 ORTHO05D004583 5.1e-29 132.5 280 36.4
FvH4_5g25250 Fragaria vesca HOM05D003937 ORTHO05D004583 6.7e-29 132.1 281 38.1
RcHm_v2.0_Chr7g0215391 Rosa chinensis HOM05D003937 ORTHO05D004583 3.3e-28 129.8 280 38.6
Psat5g000520 Pisum sativum HOM05D003937 ORTHO05D004583 4.3e-28 129.4 194 43.3
Cfa014094 Carpinus fangiana HOM05D003937 ORTHO05D004583 5.7e-28 129.0 281 35.2
Solyc04g082450.3 Solanum lycopersicum HOM05D003937 ORTHO05D004583 9.7e-28 128.3 278 33.1
Lj5P172T81 Lonicera japonica HOM05D003937 ORTHO05D004583 2.8e-27 126.7 190 43.7
QL02p014402 Quercus lobata HOM05D003937 ORTHO05D004583 6.3e-27 125.6 263 35.4
Sopen04g036060 Solanum pennellii HOM05D003937 ORTHO05D004583 6.3e-27 125.6 277 32.9
Haze_22797 Corylus avellana HOM05D003937 ORTHO05D004583 1.1e-26 124.8 265 37.0
CAN.G311.122 Capsicum annuum HOM05D003937 ORTHO05D004583 5.3e-26 122.5 278 32.0
Cc10_g00590 Coffea canephora HOM05D003937 ORTHO05D004583 6.9e-26 122.1 294 32.7
MSTRG.24495 Avicennia marina HOM05D003937 ORTHO05D004583 9.0e-26 121.7 285 35.1
arahy.Tifrunner.gnm1.ann1.X4XIB4 Arachis hypogaea HOM05D003937 ORTHO05D004583 7.7e-25 118.6 176 42.0
Lj4A806T76 Lonicera japonica HOM05D003937 ORTHO05D004583 1.0e-24 118.2 288 31.9
MD06G1009100 Malus domestica HOM05D003937 ORTHO05D004583 2.9e-24 116.7 260 38.1
Nitab4.5_0000588g0020 Nicotiana tabacum HOM05D003937 ORTHO05D004583 1.4e-23 114.4 264 33.7
Rhsim07G0256300 Rhododendron simsii HOM05D003937 ORTHO05D004583 1.4e-23 114.4 263 36.1
SGA_v2.0_scaffold32G13344 Striga asiatica HOM05D003937 ORTHO05D004583 1.4e-23 114.4 193 44.6
Lalb_Chr11g0061231 Lupinus albus HOM05D003937 ORTHO05D004583 1.9e-23 114.0 289 34.6
CANSAT25G1278 Cannabis sativa HOM05D003937 ORTHO05D004583 3.2e-23 113.2 280 32.5
GSVIVG01023888001 Vitis vinifera HOM05D003937 ORTHO05D004583 3.2e-23 113.2 116 56.0
Oeu033835.1 Olea europaea HOM05D003937 ORTHO05D004583 1.2e-22 111.3 267 35.2
FAN04G2017 Fragaria x ananassa HOM05D003937 ORTHO05D004583 2.7e-22 110.2 264 35.6
FAN18G0752 Fragaria x ananassa HOM05D003937 ORTHO05D004583 3.6e-22 109.8 264 36.4
Haze_22798 Corylus avellana HOM05D003937 ORTHO05D004583 4.6e-22 109.4 267 34.1
HPP92_021046 Vanilla planifolia HOM05D003937 ORTHO05D004583 4.6e-22 109.4 270 35.9
PGSC0003DMG400009905 Solanum tuberosum HOM05D003937 ORTHO05D004583 2.3e-21 107.1 261 31.4
SalBow6G3106 Salvia bowleyana HOM05D003937 ORTHO05D004583 3.9e-21 106.3 285 34.0
MBI08_g12714_MAGBIO Magnolia biondii HOM05D003937 ORTHO05D004583 3.3e-20 103.2 119 53.8
DCAR_013923 Daucus carota HOM05D003937 ORTHO05D004583 4.3e-20 102.8 287 32.1
FAN08G1258 Fragaria x ananassa HOM05D003937 ORTHO05D004583 5.7e-20 102.4 266 36.5
Oeu046353.1 Olea europaea HOM05D003937 ORTHO05D004583 1.3e-19 101.3 278 32.0
DCAR_016775 Daucus carota HOM05D003937 ORTHO05D004583 2.8e-19 100.1 284 32.7
vmacro04409 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 2.8e-19 100.1 256 32.8
Aqoxy6G01688 Aquilegia oxysepala HOM05D003937 ORTHO05D004583 6.3e-19 99.0 265 32.1
Lsat_1_v5_gn_3_48780 Lactuca sativa HOM05D003937 ORTHO05D004583 1.8e-18 97.4 202 38.6
GSVIVG01026659001 Vitis vinifera HOM05D003937 ORTHO05D004583 3.1e-18 96.7 139 46.8
Sed0014450 Sechium edule HOM05D003937 ORTHO05D004583 9.1e-18 95.1 278 32.0
ECA246G4591 Erigeron canadensis HOM05D003937 ORTHO05D004583 3.4e-17 93.2 237 36.7
Migut.N02961 Erythranthe guttata HOM05D003937 ORTHO05D004583 3.4e-17 93.2 269 33.1
Aa31LG6G16740 Aethionema arabicum HOM05D003937 ORTHO05D004583 1.3e-16 91.3 192 36.5
Nn6g31719 Nelumbo nucifera HOM05D003937 ORTHO05D004583 1.3e-16 91.3 114 49.1
Sp7g37440 Schrenkiella parvula HOM05D003937 ORTHO05D004583 5.0e-16 89.4 217 35.0
Thhalv10026442m.g Eutrema salsugineum HOM05D003937 ORTHO05D004583 1.1e-15 88.2 132 46.2
MELO3C026537.2 Cucumis melo HOM05D003937 ORTHO05D004583 1.9e-15 87.4 277 31.8
ATR0661G493 Amborella trichopoda HOM05D003937 ORTHO05D004583 2.5e-15 87.0 371 28.8
CDE05G2511 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 3.2e-15 86.7 264 31.1
AT4G38280 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 4.2e-15 86.3 196 34.7
AT2G45250 Arabidopsis thaliana HOM05D003937 ORTHO05D004583 5.5e-15 85.9 71 66.2
AL7G10200 Arabidopsis lyrata HOM05D003937 ORTHO05D004583 1.2e-14 84.7 71 64.8
BcaB03g12256 Brassica carinata HOM05D003937 ORTHO05D004583 7.9e-14 82.0 70 65.7
Carub.0007s0022 Capsella rubella HOM05D003937 ORTHO05D004583 7.9e-14 82.0 98 53.1
unitig_8.g3603 Utricularia gibba HOM05D000001 ORTHO05D000003 7.9e-14 82.0 242 33.5
GSVIVG01009897001 Vitis vinifera HOM05D003937 ORTHO05D004583 7.9e-14 82.0 107 46.7
Peaxi162Scf00711g00414 Petunia axillaris HOM05D003937 ORTHO05D004583 2.3e-13 80.5 259 27.4
BraA08t34322Z Brassica rapa HOM05D003937 ORTHO05D004583 3.9e-13 79.7 70 64.3
ECA233G5124 Erigeron canadensis HOM05D003937 ORTHO05D004583 5.2e-13 79.3 277 28.5
Zm00001eb420050 Zea mays HOM05D003937 ORTHO05D004583 5.2e-13 79.3 179 36.9
CsaV3_6G031550 Cucumis sativus L. HOM05D003937 ORTHO05D004583 8.8e-13 78.6 274 29.2
BolC3t20032H Brassica oleracea HOM05D003937 ORTHO05D004583 3.3e-12 76.6 67 65.7
Os09g0549400 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 3.3e-12 76.6 73 53.4
Cc09_g10730 Coffea canephora HOM05D003937 ORTHO05D004583 5.7e-12 75.9 73 61.6
Os04g0136900 Oryza sativa ssp. japonica HOM05D003937 ORTHO05D004583 7.4e-12 75.5 92 44.6
C03p77740 Brassica napus HOM05D003937 ORTHO05D004583 9.7e-12 75.1 67 64.2
CDE05G1352 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 9.7e-12 75.1 243 29.6
CDE06G0218 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 1.7e-11 74.3 114 43.0
A08p23700 Brassica napus HOM05D003937 ORTHO05D004583 8.2e-11 72.0 67 62.7
ClCG08G009390 Citrullus lanatus HOM05D003937 ORTHO05D004583 1.8e-10 70.9 268 28.7
HanXRQChr12g0367561 Helianthus annuus HOM05D003937 ORTHO05D004583 1.8e-10 70.9 277 26.4
SGA_v2.0_scaffold364G49977 Striga asiatica HOM05D003937 ORTHO05D004583 2.4e-10 70.5 282 31.6
Dinv31951 Davidia involucrata HOM05D003937 ORTHO05D004583 3.1e-10 70.1 114 43.9
HPP92_020992 Vanilla planifolia HOM05D003937 ORTHO05D004583 3.1e-10 70.1 205 32.7
SGA_v2.0_scaffold58G20314 Striga asiatica HOM05D003937 ORTHO05D004583 4.1e-10 69.7 180 33.3
Zm00001eb104250 Zea mays HOM05D003937 ORTHO05D004583 5.3e-10 69.3 315 29.2
HPP92_025977 Vanilla planifolia HOM05D003937 ORTHO05D004583 9.1e-10 68.6 217 30.0
Lsat_1_v5_gn_8_26360 Lactuca sativa HOM05D003937 ORTHO05D004583 3.5e-09 66.6 66 54.5
SEGI_28645 Sequoiadendron giganteum HOM05D003937 ORTHO05D004583 5.9e-09 65.9 164 32.3
CDE06G2177 Ceratophyllum demersum HOM05D003937 ORTHO05D004583 7.7e-09 65.5 85 45.9
CARHR294070 Cardamine hirsuta HOM05D003937 ORTHO05D004583 1.3e-08 64.7 64 54.7
HanXRQChr13g0409731 Helianthus annuus HOM05D003937 ORTHO05D004583 2.2e-08 63.9 78 44.9
CiPaw.07G137900 Carya illinoinensis HOM05D003937 ORTHO05D004583 8.5e-08 62.0 103 39.8
AagrBONN_evm.TU.Sc2ySwM_117.297 Anthoceros agrestis HOM05D003937 ORTHO05D004583 3.2e-07 60.1 141 33.3
vmacro08750 Vaccinium macrocarpon HOM05D003937 ORTHO05D004583 3.2e-07 60.1 65 50.8
Pp3c19_6980 Physcomitrium patens HOM05D003937 ORTHO05D004583 9.4e-07 58.5 69 46.4


User provided reference genes

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