Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 5.4e-262 907.1 463 100.0
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 5.1e-220 767.7 463 86.8
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 8.3e-186 654.1 467 73.7
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 1.1e-185 653.7 467 73.0
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 1.1e-185 653.7 468 73.7
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 2.7e-184 649.0 467 73.4
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 1.0e-183 647.1 468 72.6
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 8.5e-183 644.0 468 72.2
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 5.5e-182 641.3 467 72.2
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 5.5e-182 641.3 470 72.1
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 2.3e-180 636.0 467 73.4
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 1.7e-178 629.8 467 71.3
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 4.9e-178 628.2 467 69.8
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 6.3e-178 627.9 469 72.1
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 2.3e-175 619.4 467 68.7
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.1e-174 617.1 467 68.3
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.9e-174 616.3 465 69.9
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 3.3e-174 615.5 469 69.1
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 1.6e-173 613.2 467 69.8
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 1.5e-171 606.7 496 66.1
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 7.5e-171 604.4 469 71.0
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 9.2e-169 597.4 467 66.6
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 1.2e-168 597.0 467 68.5
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.0e-168 596.3 467 66.8
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 4.6e-168 595.1 467 66.6
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.9e-168 594.7 467 69.0
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.0e-167 594.0 467 66.4
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.3e-167 592.8 467 66.4
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 6.6e-167 591.3 468 66.7
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 1.5e-166 590.1 432 73.1
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 7.3e-166 587.8 467 66.0
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.2e-165 587.0 468 67.5
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.4e-164 583.6 468 68.2
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 2.3e-164 582.8 468 66.9
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 2.3e-164 582.8 470 66.6
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 4.0e-164 582.0 468 66.0
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 1.5e-163 580.1 468 65.8
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 7.5e-163 577.8 468 65.4
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 1.7e-162 576.6 487 64.1
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 4.1e-161 572.0 468 65.8
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 5.4e-161 571.6 492 63.2
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 5.4e-161 571.6 468 64.7
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 2.0e-160 569.7 470 66.0
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 1.7e-159 566.6 470 66.0
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 5.0e-159 565.1 470 66.0
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 6.6e-159 564.7 471 65.0
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 1.9e-158 563.1 490 64.9
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 4.3e-158 562.0 468 66.2
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 7.3e-158 561.2 471 64.3
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 8.1e-157 557.8 489 64.4
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 2.2e-154 549.7 522 59.8
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 4.6e-152 542.0 476 64.1
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.3e-151 539.7 532 60.3
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 4.3e-150 535.4 480 64.4
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 7.3e-150 534.6 495 61.0
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 1.2e-149 533.9 474 62.4
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 1.2e-149 533.9 511 58.7
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 8.1e-149 531.2 469 63.1
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 1.4e-148 530.4 498 58.2
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 1.3e-146 523.9 508 58.5
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 4.9e-146 521.9 504 57.5
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 8.4e-146 521.2 481 61.5
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 8.4e-146 521.2 471 62.0
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 1.2e-141 507.3 436 64.2
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.4e-140 503.8 493 59.0
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 2.0e-139 500.0 478 60.3
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.3e-135 487.3 469 59.1
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.7e-135 486.9 368 72.0
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.7e-135 486.9 466 59.4
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 2.5e-134 483.0 477 56.6
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 7.3e-134 481.5 516 55.0
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 8.1e-133 478.0 480 59.6
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 1.4e-132 477.2 478 58.2
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.1e-132 476.1 483 59.6
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 2.0e-131 473.4 502 54.6
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 9.9e-131 471.1 482 58.9
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 9.9e-131 471.1 466 58.6
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 1.3e-130 470.7 483 59.2
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 1.3e-130 470.7 484 58.9
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 1.3e-130 470.7 491 57.2
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 1.7e-130 470.3 546 53.5
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 2.9e-130 469.5 470 57.0
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 6.4e-130 468.4 480 58.3
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.1e-129 467.6 353 70.8
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 2.4e-129 466.5 546 53.3
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 5.4e-129 465.3 489 58.3
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 2.3e-127 459.9 485 58.8
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 5.1e-127 458.8 419 61.8
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 2.1e-125 453.4 534 50.9
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 8.1e-125 451.4 488 56.1
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 4.5e-123 445.7 352 67.3
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 6.4e-122 441.8 497 55.1
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.4e-121 440.7 481 52.4
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 1.4e-121 440.7 472 57.6
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 7.1e-121 438.3 488 54.9
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 1.3e-119 434.1 510 52.9
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 3.0e-119 433.0 474 55.1
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 3.9e-119 432.6 486 56.0
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 3.3e-118 429.5 556 49.5
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 9.0e-116 421.4 431 56.6
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.5e-115 420.6 557 47.2
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 1.7e-114 417.2 319 71.2
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 3.3e-110 402.9 519 48.2
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 4.8e-109 399.1 319 67.4
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.8e-108 397.1 515 48.0
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 1.4e-105 387.5 437 54.0
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 7.2e-97 358.6 254 76.0
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 3.4e-70 270.0 355 46.8
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.7e-69 267.7 173 75.7
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 3.2e-65 253.4 215 61.9
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 5.5e-65 252.7 219 63.5
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 7.2e-65 252.3 258 55.4
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 1.2e-64 251.5 219 63.0
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 2.0e-62 244.2 214 62.6
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 7.8e-59 232.3 266 51.1
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 5.0e-58 229.6 485 36.5
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 1.0e-50 205.3 518 34.2
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 3.7e-45 186.8 366 36.9
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 6.4e-45 186.0 478 34.1
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 2.0e-43 181.0 426 36.2
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 3.0e-42 177.2 465 30.8
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 1.4e-36 158.3 181 51.4
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 3.5e-35 153.7 491 31.8
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 3.0e-34 150.6 420 32.6
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 4.3e-33 146.7 155 55.5
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 7.3e-33 146.0 484 31.4
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.2e-32 145.2 128 60.2
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 1.0e-26 125.6 445 30.1
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.6e-24 118.2 136 50.7
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.6e-24 118.2 114 54.4
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 3.6e-16 90.5 78 66.7
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 6.0e-11 73.2 41 80.5


User provided reference genes

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