Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0950 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 2.8e-194 681.8 355 100.0
TWI79G0577 Tripterygium wilfordii HOM05D004794 ORTHO05D005875 1.3e-175 619.8 355 91.8
PGR102G0643 Punica granatum HOM05D004794 ORTHO05D005875 9.0e-140 500.7 357 77.0
Gohir.D12G147200 Gossypium hirsutum HOM05D004794 ORTHO05D005875 4.4e-139 498.4 358 77.7
Gohir.A12G142300 Gossypium hirsutum HOM05D004794 ORTHO05D005875 5.8e-139 498.0 361 77.6
Ciclev10015744m.g Citrus clementina HOM05D004794 ORTHO05D005875 7.6e-139 497.7 358 75.4
Gorai.008G158400 Gossypium raimondii HOM05D004794 ORTHO05D005875 1.3e-138 496.9 358 77.4
QL01p003046 Quercus lobata HOM05D004794 ORTHO05D005875 1.3e-138 496.9 359 75.8
Manes.14G109500 Manihot esculenta HOM05D004794 ORTHO05D005875 6.4e-138 494.6 369 75.6
Thecc.02G215600 Theobroma cacao HOM05D004794 ORTHO05D005875 1.4e-137 493.4 357 76.2
Dinv16165 Davidia involucrata HOM05D004794 ORTHO05D005875 1.9e-137 493.0 356 74.4
Cfa015814 Carpinus fangiana HOM05D004794 ORTHO05D005875 7.1e-137 491.1 359 75.8
Manes.06G063100 Manihot esculenta HOM05D004794 ORTHO05D005875 9.3e-137 490.7 365 74.5
Atru.chr11.341 Acer truncatum HOM05D004794 ORTHO05D005875 1.7e-135 486.5 363 75.2
TAR374G0638 Trochodendron aralioides HOM05D004794 ORTHO05D005875 1.7e-135 486.5 338 77.2
Nn4g24023 Nelumbo nucifera HOM05D004794 ORTHO05D005875 8.7e-135 484.2 366 73.2
Prupe.1G320000 Prunus persica HOM05D004794 ORTHO05D005875 8.7e-135 484.2 363 74.1
CiPaw.05G245300 Carya illinoinensis HOM05D004794 ORTHO05D005875 1.9e-134 483.0 362 74.3
Atru.chr11.334 Acer truncatum HOM05D004794 ORTHO05D005875 2.1e-133 479.6 363 74.7
Dinv04904 Davidia involucrata HOM05D004794 ORTHO05D005875 3.6e-133 478.8 362 74.0
Eucgr.B02866 Eucalyptus grandis HOM05D004794 ORTHO05D005875 8.1e-133 477.6 371 74.1
MD16G1034600 Malus domestica HOM05D004794 ORTHO05D005875 9.9e-131 470.7 362 72.7
Phvul.007G034300 Phaseolus vulgaris HOM05D004794 ORTHO05D005875 3.8e-130 468.8 336 74.1
Peaxi162Scf00205g01022 Petunia axillaris HOM05D004794 ORTHO05D005875 4.9e-130 468.4 353 72.2
Potri.010G117200 Populus trichocarpa HOM05D004794 ORTHO05D005875 6.4e-130 468.0 363 72.5
Sed0004857 Sechium edule HOM05D004794 ORTHO05D005875 8.4e-130 467.6 357 72.3
ClCG05G022340 Citrullus lanatus HOM05D004794 ORTHO05D005875 1.1e-129 467.2 357 72.3
Hma1.2p1_0114F.1_g055470 Hydrangea macrophylla HOM05D004794 ORTHO05D005875 1.1e-129 467.2 357 72.5
RcHm_v2.0_Chr4g0434021 Rosa chinensis HOM05D004794 ORTHO05D005875 1.1e-129 467.2 363 73.3
THA.LOC104805049 Tarenaya hassleriana HOM05D004794 ORTHO05D005875 1.4e-129 466.8 302 83.1
TAR622G1294 Trochodendron aralioides HOM05D004794 ORTHO05D005875 1.4e-129 466.8 301 82.7
Actinidia31991 Actinidia chinensis HOM05D004794 ORTHO05D005875 1.9e-129 466.5 359 72.7
FAN22G0499 Fragaria x ananassa HOM05D004794 ORTHO05D005875 2.4e-129 466.1 357 73.1
CANSAT01G0565 Cannabis sativa HOM05D004794 ORTHO05D005875 5.4e-129 464.9 369 68.8
Glyma.20G123100 Glycine max HOM05D004794 ORTHO05D005875 5.4e-129 464.9 328 76.2
FAN17G0450 Fragaria x ananassa HOM05D004794 ORTHO05D005875 7.1e-129 464.5 357 73.1
Nitab4.5_0013146g0030 Nicotiana tabacum HOM05D004794 ORTHO05D005875 7.1e-129 464.5 357 72.3
Glyma.10G268000 Glycine max HOM05D004794 ORTHO05D005875 9.3e-129 464.2 342 73.7
Lj3A877T98 Lonicera japonica HOM05D004794 ORTHO05D005875 9.3e-129 464.2 355 72.4
CsaV3_5G034760 Cucumis sativus L. HOM05D004794 ORTHO05D005875 1.2e-128 463.8 356 70.8
CSS0006530 Camellia sinensis var. sinensis HOM05D004794 ORTHO05D005875 2.7e-128 462.6 359 72.7
MELO3C012288.2 Cucumis melo HOM05D004794 ORTHO05D005875 3.5e-128 462.2 356 70.5
PGSC0003DMG400030563 Solanum tuberosum HOM05D004794 ORTHO05D005875 4.6e-128 461.8 357 71.7
vmacro01423 Vaccinium macrocarpon HOM05D004794 ORTHO05D005875 6.0e-128 461.5 314 79.3
FAN07G1519 Fragaria x ananassa HOM05D004794 ORTHO05D005875 7.9e-128 461.1 360 71.9
Lalb_Chr02g0145631 Lupinus albus HOM05D004794 ORTHO05D005875 7.9e-128 461.1 301 78.7
Sc04g0005890 Simmondsia chinensis HOM05D004794 ORTHO05D005875 7.9e-128 461.1 352 73.3
FvH4_4g26390 Fragaria vesca HOM05D004794 ORTHO05D005875 1.0e-127 460.7 359 71.6
FAN12G0017 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.0e-127 460.7 359 71.6
FAN12G0914 Fragaria x ananassa HOM05D004794 ORTHO05D005875 1.0e-127 460.7 359 71.6
Sopen05g004370 Solanum pennellii HOM05D004794 ORTHO05D005875 1.0e-127 460.7 320 76.9
GSVIVG01011805001 Vitis vinifera HOM05D004794 ORTHO05D005875 1.8e-127 459.9 316 78.8
MD13G1032500 Malus domestica HOM05D004794 ORTHO05D005875 2.3e-127 459.5 367 71.4
Aa31sc79G60 Aethionema arabicum HOM05D004794 ORTHO05D005875 3.0e-127 459.1 298 82.6
Solyc05g008530.3 Solanum lycopersicum HOM05D004794 ORTHO05D005875 3.0e-127 459.1 320 76.6
Psat6g222720 Pisum sativum HOM05D004794 ORTHO05D005875 5.1e-127 458.4 313 75.1
arahy.Tifrunner.gnm1.ann1.B80FEM Arachis hypogaea HOM05D004794 ORTHO05D005875 6.7e-127 458.0 331 74.9
CAN.G1489.14 Capsicum annuum HOM05D004794 ORTHO05D005875 8.7e-127 457.6 358 71.8
Haze_00684 Corylus avellana HOM05D004794 ORTHO05D005875 8.7e-127 457.6 359 72.1
ATR0691G049 Amborella trichopoda HOM05D004794 ORTHO05D005875 1.5e-126 456.8 300 81.3
arahy.Tifrunner.gnm1.ann1.9SFQ4R Arachis hypogaea HOM05D004794 ORTHO05D005875 1.5e-126 456.8 331 74.6
BcaC03g16998 Brassica carinata HOM05D004794 ORTHO05D005875 2.5e-126 456.1 361 72.6
Sabra10G0088400 Salix brachista HOM05D004794 ORTHO05D005875 2.5e-126 456.1 409 64.5
Medtr1g109080 Medicago truncatula HOM05D004794 ORTHO05D005875 3.3e-126 455.7 310 75.5
Nitab4.5_0000350g0140 Nicotiana tabacum HOM05D004794 ORTHO05D005875 3.3e-126 455.7 320 75.9
Sabra10G0086800 Salix brachista HOM05D004794 ORTHO05D005875 3.3e-126 455.7 409 64.5
EL10Ac6g14275 Beta vulgaris HOM05D004794 ORTHO05D005875 4.3e-126 455.3 316 77.8
Aqoxy5G03876 Aquilegia oxysepala HOM05D004794 ORTHO05D005875 7.4e-126 454.5 363 69.1
Lj5g0022431 Lotus japonicus HOM05D004794 ORTHO05D005875 7.4e-126 454.5 332 74.4
BcaB07g30424 Brassica carinata HOM05D004794 ORTHO05D005875 2.8e-125 452.6 362 71.3
C07p31580 Brassica napus HOM05D004794 ORTHO05D005875 6.2e-125 451.4 361 70.9
AUR62002773 Chenopodium quinoa HOM05D004794 ORTHO05D005875 6.2e-125 451.4 313 78.0
Cc11_g09270 Coffea canephora HOM05D004794 ORTHO05D005875 6.2e-125 451.4 365 68.5
Duzib251G0273 Durio zibethinus HOM05D004794 ORTHO05D005875 6.2e-125 451.4 362 71.3
PSO170G3473 Papaver somniferum HOM05D004794 ORTHO05D005875 8.1e-125 451.1 315 77.5
PSO445G0020 Papaver somniferum HOM05D004794 ORTHO05D005875 1.1e-124 450.7 306 79.1
BcaC06g34216 Brassica carinata HOM05D004794 ORTHO05D005875 1.4e-124 450.3 361 70.9
BolC7t43697H Brassica oleracea HOM05D004794 ORTHO05D005875 1.4e-124 450.3 361 70.9
BraA06t27340Z Brassica rapa HOM05D004794 ORTHO05D005875 1.4e-124 450.3 363 71.1
Lalb_Chr06g0165741 Lupinus albus HOM05D004794 ORTHO05D005875 1.4e-124 450.3 312 76.6
A06p44670 Brassica napus HOM05D004794 ORTHO05D005875 1.8e-124 449.9 363 71.3
HanXRQChr15g0477711 Helianthus annuus HOM05D004794 ORTHO05D005875 2.4e-124 449.5 359 68.8
Ca_23704_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 3.1e-124 449.1 313 74.1
Ca_30211_v3 Cicer arietinum L. HOM05D004794 ORTHO05D005875 3.1e-124 449.1 313 74.1
Duzib268G0539 Durio zibethinus HOM05D004794 ORTHO05D005875 3.1e-124 449.1 357 71.4
Ah.03g138420 Amaranthus hybridus HOM05D004794 ORTHO05D005875 4.0e-124 448.7 356 71.1
Hund25018 Selenicereus undatus HOM05D004794 ORTHO05D005875 6.9e-124 448.0 321 76.9
AL5G10060 Arabidopsis lyrata HOM05D004794 ORTHO05D005875 9.0e-124 447.6 354 71.5
BolC2t10997H Brassica oleracea HOM05D004794 ORTHO05D005875 1.2e-123 447.2 361 70.6
AT2G01110 Arabidopsis thaliana HOM05D004794 ORTHO05D005875 1.5e-123 446.8 354 70.9
Sp2g12580 Schrenkiella parvula HOM05D004794 ORTHO05D005875 1.5e-123 446.8 283 83.7
C02p49070 Brassica napus HOM05D004794 ORTHO05D005875 4.5e-123 445.3 363 70.8
Carub.0005s0009 Capsella rubella HOM05D004794 ORTHO05D005875 4.5e-123 445.3 309 78.3
SGA_v2.0_scaffold376G50295 Striga asiatica HOM05D004794 ORTHO05D005875 4.5e-123 445.3 312 77.2
BcaC06g31333 Brassica carinata HOM05D004794 ORTHO05D005875 5.8e-123 444.9 280 83.6
EL10Ac4g08742 Beta vulgaris HOM05D004794 ORTHO05D005875 7.6e-123 444.5 350 70.3
BraA02t08175Z Brassica rapa HOM05D004794 ORTHO05D005875 9.9e-123 444.1 363 71.1
A02p31690 Brassica napus HOM05D004794 ORTHO05D005875 1.3e-122 443.7 363 71.1
CDE06G2233 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.7e-122 443.4 310 77.1
Lsat_1_v5_gn_3_54000 Lactuca sativa HOM05D004794 ORTHO05D005875 2.2e-122 443.0 355 68.5
MSTRG.13564 Avicennia marina HOM05D004794 ORTHO05D005875 2.9e-122 442.6 359 69.1
CARHR143660 Cardamine hirsuta HOM05D004794 ORTHO05D005875 1.1e-121 440.7 290 80.3
Oeu029170.1 Olea europaea HOM05D004794 ORTHO05D005875 1.4e-121 440.3 360 67.5
HanXRQChr01g0013251 Helianthus annuus HOM05D004794 ORTHO05D005875 2.5e-121 439.5 355 67.9
MBI16_g29821_MAGBIO Magnolia biondii HOM05D004794 ORTHO05D005875 7.1e-121 438.0 373 67.6
Os01g0501700 Oryza sativa ssp. japonica HOM05D004794 ORTHO05D005875 7.1e-121 438.0 290 82.1
Zm00001eb009240 Zea mays HOM05D004794 ORTHO05D005875 2.1e-120 436.4 319 74.9
Lj6A750T92 Lonicera japonica HOM05D004794 ORTHO05D005875 1.0e-119 434.1 322 73.3
ECA246G3704 Erigeron canadensis HOM05D004794 ORTHO05D005875 1.8e-119 433.3 294 76.9
SalBow8G5373 Salvia bowleyana HOM05D004794 ORTHO05D005875 2.3e-119 433.0 357 67.5
HPP92_021566 Vanilla planifolia HOM05D004794 ORTHO05D005875 2.3e-119 433.0 338 69.8
HPP92_027135 Vanilla planifolia HOM05D004794 ORTHO05D005875 3.0e-119 432.6 309 74.4
Migut.E00392 Erythranthe guttata HOM05D004794 ORTHO05D005875 5.1e-119 431.8 309 73.8
DCAR_007276 Daucus carota HOM05D004794 ORTHO05D005875 8.7e-119 431.0 269 83.6
CDE07G0253 Ceratophyllum demersum HOM05D004794 ORTHO05D005875 1.9e-118 429.9 259 86.1
SEGI_17562 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.3e-118 429.1 278 81.7
Oeu048392.1 Olea europaea HOM05D004794 ORTHO05D005875 7.4e-118 427.9 336 69.3
COL.COLO4_20120 Corchorus olitorius HOM05D004794 ORTHO05D005875 1.1e-116 424.1 244 91.0
Migut.L01019 Erythranthe guttata HOM05D004794 ORTHO05D005875 4.9e-114 415.2 307 74.9
AUR62037257 Chenopodium quinoa HOM05D004794 ORTHO05D005875 5.5e-113 411.8 403 60.5
Thhalv10000946m.g Eutrema salsugineum HOM05D004794 ORTHO05D005875 1.1e-110 404.1 285 78.9
HPP92_020138 Vanilla planifolia HOM05D004794 ORTHO05D005875 1.1e-110 404.1 301 73.4
Lsat_1_v5_gn_4_15760 Lactuca sativa HOM05D004794 ORTHO05D005875 1.9e-110 403.3 356 65.7
Rhsim12G0088300 Rhododendron simsii HOM05D004794 ORTHO05D005875 5.7e-110 401.7 342 67.5
ECA234G2688 Erigeron canadensis HOM05D004794 ORTHO05D005875 1.6e-109 400.2 298 70.5
AagrBONN_evm.TU.Sc2ySwM_368.2774 Anthoceros agrestis HOM05D004794 ORTHO05D005875 1.1e-108 397.5 305 71.1
SalBow8G4147 Salvia bowleyana HOM05D004794 ORTHO05D005875 1.1e-108 397.5 346 65.6
Mapoly0010s0061 Marchantia polymorpha HOM05D004794 ORTHO05D005875 1.4e-108 397.1 326 68.4
Pp3c3_36440 Physcomitrium patens HOM05D004794 ORTHO05D005875 1.2e-107 394.0 249 80.3
DCAR_030186 Daucus carota HOM05D004794 ORTHO05D005875 4.5e-107 392.1 225 88.4
Pp3c8_3800 Physcomitrium patens HOM05D004794 ORTHO05D005875 5.9e-107 391.7 275 74.9
SMO119G0095 Selaginella moellendorffii HOM05D004794 ORTHO05D005875 1.1e-105 387.5 249 78.7
HanXRQChr17g0567091 Helianthus annuus HOM05D004794 ORTHO05D005875 1.9e-105 386.7 307 68.7
TPR.G4856 Trifolium pratense HOM05D004794 ORTHO05D005875 2.3e-103 379.8 265 73.6
CBR_g19219 Chara braunii HOM05D004794 ORTHO05D005875 2.5e-102 376.3 246 76.4
PRCOL_00000588 Prasinoderma coloniale HOM05D004794 ORTHO05D005875 7.9e-96 354.8 250 70.0
Zm00001eb399680 Zea mays HOM05D004794 ORTHO05D005875 2.0e-94 350.1 299 65.9
MCO02G003 Micromonas commoda HOM05D004794 ORTHO05D005875 5.9e-91 338.6 240 74.6
Oeu022847.1 Olea europaea HOM05D004794 ORTHO05D005875 6.5e-90 335.1 297 66.0
Cre03.g145887 Chlamydomonas reinhardtii HOM05D004794 ORTHO05D005875 9.4e-89 331.3 250 68.0
VMungo0720G1627 Vigna mungo HOM05D004794 ORTHO05D005875 7.4e-86 321.6 343 56.6
unitig_8.g3987 Utricularia gibba HOM05D000722 ORTHO05D000590 4.0e-63 246.1 251 58.2
A09p23220 Brassica napus HOM05D004794 ORTHO05D005875 8.9e-63 245.0 149 85.2
BraA09t37925Z Brassica rapa HOM05D004794 ORTHO05D005875 7.5e-62 241.9 161 78.9
BcaC03g16992 Brassica carinata HOM05D004794 ORTHO05D005875 4.0e-55 219.5 169 71.0
BolC2t10985H Brassica oleracea HOM05D004794 ORTHO05D005875 4.0e-55 219.5 169 71.0
Cpa.g.sc65.92 Carica papaya HOM05D004794 ORTHO05D005875 2.8e-48 196.8 108 95.4
SEGI_30482 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 2.2e-37 160.6 102 81.4
SEGI_31512 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 3.7e-37 159.8 99 82.8
SEGI_19547 Sequoiadendron giganteum HOM05D004794 ORTHO05D005875 7.8e-35 152.1 116 72.4
C09p29960 Brassica napus HOM05D004794 ORTHO05D039171 6.6e-34 149.1 121 66.1
BcaC04g21603 Brassica carinata HOM05D004794 ORTHO05D039171 6.0e-27 125.9 102 70.6
unitig_8.g3988 Utricularia gibba HOM05D004794 ORTHO05D005875 5.8e-22 109.4 61 90.2
BolC9t55859H Brassica oleracea HOM05D004794 ORTHO05D005875 8.4e-21 105.5 64 89.1


User provided reference genes

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