Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0925 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 1.9e-190 669.1 351 100.0
Atru.chr13.2479 Acer truncatum HOM05D006459 ORTHO05D008414 6.3e-162 574.3 350 80.9
Thecc.08G176900 Theobroma cacao HOM05D006459 ORTHO05D008414 4.5e-160 568.2 353 79.9
Manes.18G118600 Manihot esculenta HOM05D006459 ORTHO05D008414 3.8e-159 565.1 358 78.8
Potri.019G072900 Populus trichocarpa HOM05D006459 ORTHO05D008414 6.5e-159 564.3 355 77.7
Dinv09391 Davidia involucrata HOM05D006459 ORTHO05D008414 1.1e-158 563.5 348 82.2
Gorai.009G266900 Gossypium raimondii HOM05D006459 ORTHO05D008414 1.5e-158 563.1 349 80.2
Gohir.A05G253500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.2e-157 560.1 349 79.9
Gohir.D05G255500 Gossypium hirsutum HOM05D006459 ORTHO05D008414 1.2e-157 560.1 349 79.9
Potri.013G099900 Populus trichocarpa HOM05D006459 ORTHO05D008414 1.0e-156 557.0 351 78.9
Prupe.1G544300 Prunus persica HOM05D006459 ORTHO05D008414 2.3e-156 555.8 348 79.3
Actinidia29387 Actinidia chinensis HOM05D006459 ORTHO05D008414 2.0e-155 552.7 343 79.0
Sabra19G0084300 Salix brachista HOM05D006459 ORTHO05D008414 2.6e-155 552.4 356 80.1
Ciclev10020855m.g Citrus clementina HOM05D006459 ORTHO05D008414 3.3e-155 552.0 349 77.4
HanXRQChr14g0455131 Helianthus annuus HOM05D006459 ORTHO05D008414 3.3e-155 552.0 346 80.1
Lsat_1_v5_gn_4_65220 Lactuca sativa HOM05D006459 ORTHO05D008414 3.3e-155 552.0 344 77.9
VMungo1215G2765 Vigna mungo HOM05D006459 ORTHO05D008414 3.3e-155 552.0 343 78.4
Glyma.11G014000 Glycine max HOM05D006459 ORTHO05D008414 5.7e-155 551.2 344 78.8
RcHm_v2.0_Chr7g0232091 Rosa chinensis HOM05D006459 ORTHO05D008414 7.5e-155 550.8 353 79.9
MD08G1213000 Malus domestica HOM05D006459 ORTHO05D008414 9.7e-155 550.4 348 78.4
Sopen11g018500 Solanum pennellii HOM05D006459 ORTHO05D008414 1.3e-154 550.1 347 77.2
COL.COLO4_24570 Corchorus olitorius HOM05D006459 ORTHO05D008414 1.7e-154 549.7 362 77.3
FvH4_5g33360 Fragaria vesca HOM05D006459 ORTHO05D008414 1.7e-154 549.7 344 79.9
Solyc11g042430.2 Solanum lycopersicum HOM05D006459 ORTHO05D008414 2.8e-154 548.9 347 76.9
CSS0029003 Camellia sinensis var. sinensis HOM05D006459 ORTHO05D008414 3.7e-154 548.5 348 77.3
Cfa008090 Carpinus fangiana HOM05D006459 ORTHO05D008414 4.8e-154 548.1 349 77.4
CiPaw.03G015900 Carya illinoinensis HOM05D006459 ORTHO05D008414 4.8e-154 548.1 347 77.2
Phvul.002G036200 Phaseolus vulgaris HOM05D006459 ORTHO05D008414 1.1e-153 547.0 343 78.1
GSVIVG01036383001 Vitis vinifera HOM05D006459 ORTHO05D008414 1.4e-153 546.6 351 76.1
CAN.G924.3 Capsicum annuum HOM05D006459 ORTHO05D008414 7.0e-153 544.3 347 76.1
TAR628G1703 Trochodendron aralioides HOM05D006459 ORTHO05D008414 7.0e-153 544.3 347 76.7
MSTRG.1592 Avicennia marina HOM05D006459 ORTHO05D008414 1.6e-152 543.1 343 77.8
Cpa.g.sc21.78 Carica papaya HOM05D006459 ORTHO05D008414 1.6e-152 543.1 339 79.1
QL09p002119 Quercus lobata HOM05D006459 ORTHO05D008414 1.6e-152 543.1 346 80.1
CsaV3_5G040000 Cucumis sativus L. HOM05D006459 ORTHO05D008414 3.5e-152 542.0 342 77.8
Medtr5g008450 Medicago truncatula HOM05D006459 ORTHO05D008414 3.5e-152 542.0 346 74.9
CANSAT54G1068 Cannabis sativa HOM05D006459 ORTHO05D008414 5.9e-152 541.2 350 76.3
CiPaw.03G015700 Carya illinoinensis HOM05D006459 ORTHO05D008414 5.9e-152 541.2 349 76.8
Haze_13948 Corylus avellana HOM05D006459 ORTHO05D008414 7.7e-152 540.8 339 77.9
Ca_24473_v3 Cicer arietinum L. HOM05D006459 ORTHO05D008414 1.0e-151 540.4 320 80.3
Psat2g187200 Pisum sativum HOM05D006459 ORTHO05D008414 2.2e-151 539.3 346 74.6
Migut.C01370 Erythranthe guttata HOM05D006459 ORTHO05D008414 2.9e-151 538.9 345 76.8
Eucgr.F02979 Eucalyptus grandis HOM05D006459 ORTHO05D008414 6.5e-151 537.7 347 75.5
EL10Ac1g01666 Beta vulgaris HOM05D006459 ORTHO05D008414 1.1e-150 537.0 319 81.8
LjContig00222g0004888 Lotus japonicus HOM05D006459 ORTHO05D008414 1.1e-150 537.0 320 80.6
Lalb_Chr09g0320511 Lupinus albus HOM05D006459 ORTHO05D008414 1.6e-149 533.1 315 80.6
Cc10_g08780 Coffea canephora HOM05D006459 ORTHO05D008414 3.6e-149 531.9 356 73.9
ECA234G2100 Erigeron canadensis HOM05D006459 ORTHO05D008414 6.1e-149 531.2 321 79.4
ClCG08G001020 Citrullus lanatus HOM05D006459 ORTHO05D008414 1.0e-148 530.4 346 76.6
arahy.Tifrunner.gnm1.ann1.LVU4B6 Arachis hypogaea HOM05D006459 ORTHO05D008414 1.8e-148 529.6 344 75.0
SalBow7G1102 Salvia bowleyana HOM05D006459 ORTHO05D008414 2.3e-148 529.3 337 77.2
Sed0024118 Sechium edule HOM05D006459 ORTHO05D008414 4.0e-148 528.5 318 80.8
Aa31LG9G11940 Aethionema arabicum HOM05D006459 ORTHO05D008414 8.8e-148 527.3 325 78.5
THA.LOC104815846 Tarenaya hassleriana HOM05D006459 ORTHO05D008414 5.7e-147 524.6 321 77.3
Oeu023200.3 Olea europaea HOM05D006459 ORTHO05D008414 7.5e-147 524.2 307 82.7
BcaB01g02766 Brassica carinata HOM05D006459 ORTHO05D008414 1.7e-146 523.1 321 78.8
AT4G10050 Arabidopsis thaliana HOM05D006459 ORTHO05D008414 2.2e-146 522.7 321 78.8
MBI03_g28420_MAGBIO Magnolia biondii HOM05D006459 ORTHO05D008414 2.8e-146 522.3 338 75.7
Aqoxy5G00842 Aquilegia oxysepala HOM05D006459 ORTHO05D008414 3.7e-146 521.9 324 77.2
Sp6g07420 Schrenkiella parvula HOM05D006459 ORTHO05D008414 3.7e-146 521.9 321 78.8
AL6G43830 Arabidopsis lyrata HOM05D006459 ORTHO05D008414 1.1e-145 520.4 323 78.3
BcaC01g04692 Brassica carinata HOM05D006459 ORTHO05D008414 1.1e-145 520.4 321 78.2
BolC3t15799H Brassica oleracea HOM05D006459 ORTHO05D008414 1.1e-145 520.4 321 78.2
BraA03t12083Z Brassica rapa HOM05D006459 ORTHO05D008414 1.4e-145 520.0 321 78.2
Carub.0006s2860 Capsella rubella HOM05D006459 ORTHO05D008414 1.8e-145 519.6 321 78.5
A03p28850 Brassica napus HOM05D006459 ORTHO05D008414 4.1e-145 518.5 321 77.9
TPR.G37896 Trifolium pratense HOM05D006459 ORTHO05D008414 4.1e-145 518.5 395 65.8
Thhalv10028776m.g Eutrema salsugineum HOM05D006459 ORTHO05D008414 1.2e-144 516.9 321 78.5
Peaxi162Scf00078g00423 Petunia axillaris HOM05D006459 ORTHO05D008414 2.7e-144 515.8 347 75.8
C03p34880 Brassica napus HOM05D006459 ORTHO05D008414 5.9e-144 514.6 321 77.3
FAN04G1764 Fragaria x ananassa HOM05D006459 ORTHO05D008414 5.9e-144 514.6 308 82.5
PGR042G0716 Punica granatum HOM05D006459 ORTHO05D008414 5.9e-144 514.6 351 70.7
MELO3C022178.2 Cucumis melo HOM05D006459 ORTHO05D008414 2.9e-143 512.3 342 74.0
PSO170G3138 Papaver somniferum HOM05D006459 ORTHO05D008414 9.5e-142 507.3 344 69.8
HPP92_005641 Vanilla planifolia HOM05D006459 ORTHO05D008414 3.6e-141 505.4 342 71.6
Nitab4.5_0000903g0050 Nicotiana tabacum HOM05D006459 ORTHO05D008414 1.2e-139 500.4 347 71.8
PSO017G7078 Papaver somniferum HOM05D006459 ORTHO05D008414 4.4e-139 498.4 344 68.9
Os04g0443500 Oryza sativa ssp. japonica HOM05D006459 ORTHO05D008414 9.8e-139 497.3 342 71.9
unitig_8.g4894 Utricularia gibba HOM05D006459 ORTHO05D008414 1.7e-138 496.5 349 71.9
MD15G1395500 Malus domestica HOM05D006459 ORTHO05D008414 1.8e-137 493.0 349 73.1
TWI12G1446 Tripterygium wilfordii HOM05D006459 ORTHO05D008414 7.0e-137 491.1 264 93.6
ATR1089G027 Amborella trichopoda HOM05D006459 ORTHO05D008414 2.7e-136 489.2 341 70.1
Zm00001eb082080 Zea mays HOM05D006459 ORTHO05D008414 1.8e-132 476.5 348 67.8
Pp3c6_4660 Physcomitrium patens HOM05D006459 ORTHO05D008414 3.9e-127 458.8 326 67.5
Nitab4.5_0000999g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 7.3e-126 454.5 345 67.5
AagrBONN_evm.TU.Sc2ySwM_117.506 Anthoceros agrestis HOM05D006459 ORTHO05D008414 5.8e-123 444.9 314 67.5
Mapoly0007s0278 Marchantia polymorpha HOM05D006459 ORTHO05D008414 2.4e-121 439.5 321 65.1
AUR62034346 Chenopodium quinoa HOM05D006459 ORTHO05D008414 1.3e-119 433.7 255 83.5
Nitab4.5_0003013g0010 Nicotiana tabacum HOM05D006459 ORTHO05D008414 6.8e-116 421.4 347 62.8
Duzib268G1319 Durio zibethinus HOM05D006459 ORTHO05D008414 8.9e-116 421.0 348 64.4
SMO356G0681 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 3.4e-115 419.1 306 65.7
arahy.Tifrunner.gnm1.ann1.K3NID2 Arachis hypogaea HOM05D006459 ORTHO05D008414 2.1e-112 409.8 368 59.8
Lj9A698G57 Lonicera japonica HOM05D006459 ORTHO05D008414 1.3e-111 407.1 316 66.5
SGA_v2.0_scaffold118G32601 Striga asiatica HOM05D006459 ORTHO05D008414 2.0e-107 393.3 364 59.3
DCAR_017359 Daucus carota HOM05D006459 ORTHO05D008414 3.4e-107 392.5 229 81.7
Rhsim02G0145500 Rhododendron simsii HOM05D006459 ORTHO05D008414 1.7e-106 390.2 527 45.7
Sc25g0003010 Simmondsia chinensis HOM05D006459 ORTHO05D008414 8.7e-103 377.9 222 82.0
Nn5g27277 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.5e-99 367.1 253 72.7
Hma1.2p1_0074F.1_g039070 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 6.7e-87 325.1 192 81.2
SHI16717 Sapria himalayana HOM05D006459 ORTHO05D008414 4.5e-83 312.4 336 53.3
Hma1.2p1_0074F.1_g039080 Hydrangea macrophylla HOM05D006459 ORTHO05D008414 3.1e-76 289.7 165 81.8
CBR_g45928 Chara braunii HOM05D006459 ORTHO05D008414 1.8e-68 263.8 217 59.0
vmacro16046 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 3.4e-67 259.6 177 71.2
Cre12.g521250 Chlamydomonas reinhardtii HOM05D006459 ORTHO05D008414 5.9e-67 258.8 356 40.2
Haze_26337 Corylus avellana HOM05D006459 ORTHO05D008414 6.1e-64 248.8 327 43.4
HPP92_005619 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.7e-56 223.4 126 80.2
Glyma.01G230800 Glycine max HOM05D006459 ORTHO05D008414 1.5e-51 207.6 127 81.1
MCO04G089 Micromonas commoda HOM05D006459 ORTHO05D008414 2.5e-49 200.3 326 38.3
PRCOL_00002994 Prasinoderma coloniale HOM05D006459 ORTHO05D008414 8.0e-48 195.3 345 36.2
SEGI_15073 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 4.5e-43 179.5 126 71.4
HPP92_005618 Vanilla planifolia HOM05D006459 ORTHO05D008414 2.1e-40 170.6 97 81.4
SMO272G0012 Selaginella moellendorffii HOM05D006459 ORTHO05D008414 2.8e-37 160.2 98 71.4
vmacro16045 Vaccinium macrocarpon HOM05D006459 ORTHO05D008414 1.6e-35 154.5 84 89.3
CBR_g27970 Chara braunii HOM05D006459 ORTHO05D008414 5.0e-26 122.9 82 72.0
FAN08G1548 Fragaria x ananassa HOM05D006459 ORTHO05D008414 2.5e-25 120.6 61 90.2
SEGI_06082 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 5.6e-17 92.8 76 57.9
Nn179s44626 Nelumbo nucifera HOM05D006459 ORTHO05D008414 1.0e-15 88.6 56 83.9
SEGI_00088 Sequoiadendron giganteum HOM05D006459 ORTHO05D008414 1.6e-11 74.7 45 73.3
MELO3C033538.2 Cucumis melo HOM05D006459 ORTHO05D169875 2.3e-07 60.8 141 31.9
SEGI_14439 Sequoiadendron giganteum HOM05D006459 ORTHO05D385787 3.1e-07 60.5 43 62.8
Lsat_1_v5_gn_2_49420 Lactuca sativa HOM05D006459 ORTHO05D008414 7.5e-06 55.8 30 83.3


User provided reference genes

Program Settings