Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.1e-234 816.2 420 100.0
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 6.1e-188 661.0 417 79.4
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 8.0e-188 660.6 440 77.3
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 2.6e-186 655.6 427 78.5
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 3.4e-186 655.2 412 80.3
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 2.2e-185 652.5 418 79.7
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-184 650.2 420 78.1
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.4e-184 647.9 420 77.9
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 6.1e-180 634.4 415 77.1
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.4e-179 633.3 415 76.9
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 1.4e-179 633.3 408 77.9
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.4e-179 633.3 418 77.5
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.0e-179 631.7 415 76.9
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.0e-178 629.4 413 77.5
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 4.4e-178 628.2 416 76.9
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 2.2e-177 625.9 416 75.5
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 3.7e-177 625.2 414 75.1
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 1.1e-176 623.6 420 74.8
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 1.4e-176 623.2 410 75.9
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 2.4e-176 622.5 420 74.5
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 7.0e-176 620.9 412 76.2
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 7.8e-175 617.5 420 73.8
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.0e-174 617.1 419 75.9
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 1.0e-174 617.1 420 73.8
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 1.3e-174 616.7 414 72.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 3.0e-174 615.5 416 74.8
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 8.6e-174 614.0 418 73.9
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 1.5e-173 613.2 421 76.0
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 2.5e-173 612.5 418 74.9
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 9.5e-173 610.5 412 73.8
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 3.6e-172 608.6 408 75.7
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 8.0e-172 607.4 414 74.2
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 1.0e-171 607.1 416 74.0
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 1.0e-171 607.1 414 72.9
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.8e-171 606.3 458 69.9
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 1.8e-171 606.3 416 72.6
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 7.5e-170 600.9 418 71.8
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 2.9e-169 599.0 409 74.3
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 4.9e-169 598.2 416 71.4
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 1.4e-168 596.7 413 72.6
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.9e-168 596.3 411 74.0
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 3.2e-168 595.5 415 71.3
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 4.1e-168 595.1 422 70.9
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 5.4e-168 594.7 413 71.2
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 1.6e-167 593.2 415 71.1
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 2.7e-167 592.4 416 70.2
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 2.7e-167 592.4 416 70.0
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 3.5e-167 592.0 415 72.0
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 3.5e-167 592.0 416 70.7
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 6.0e-167 591.3 418 70.6
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 1.7e-166 589.7 416 70.4
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 2.3e-166 589.3 423 70.4
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 3.9e-166 588.6 416 70.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 3.9e-166 588.6 420 72.9
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 6.6e-166 587.8 424 70.0
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 2.5e-165 585.9 415 70.1
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 3.3e-165 585.5 416 71.6
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 4.3e-165 585.1 420 71.0
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 9.5e-165 583.9 420 72.4
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 1.2e-164 583.6 416 69.7
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 2.1e-164 582.8 420 71.7
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.4e-163 580.1 442 66.5
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 2.0e-162 576.2 445 65.8
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 4.4e-162 575.1 415 69.9
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 7.5e-162 574.3 445 65.6
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 1.7e-161 573.2 408 70.8
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 8.3e-161 570.9 413 69.2
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 1.4e-160 570.1 417 68.8
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 3.2e-160 568.9 462 64.5
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.7e-159 565.8 445 68.3
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 3.3e-157 558.9 412 68.2
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 5.6e-157 558.1 414 69.6
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 6.2e-156 554.7 416 67.5
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 1.1e-155 553.9 461 63.3
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.0e-154 549.7 438 68.0
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 9.9e-154 547.4 382 73.6
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 2.2e-153 546.2 455 64.2
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 1.2e-151 540.4 334 80.8
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 3.0e-150 535.8 408 67.4
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 3.3e-149 532.3 408 66.9
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.1e-147 527.3 408 66.9
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 1.4e-147 526.9 443 61.9
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 4.0e-147 525.4 419 63.2
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 2.0e-146 523.1 426 64.1
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 3.8e-145 518.8 446 61.4
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 1.9e-144 516.5 416 65.6
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.9e-144 516.5 487 57.9
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 3.5e-143 512.3 470 59.1
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 1.5e-141 506.9 412 60.7
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 4.3e-141 505.4 408 65.9
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 1.6e-140 503.4 346 76.3
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 1.4e-139 500.4 457 56.0
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 6.0e-135 485.0 301 82.4
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 3.9e-134 482.3 426 59.2
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 3.3e-133 479.2 360 67.2
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 5.6e-133 478.4 412 58.7
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 2.0e-122 443.4 316 73.4
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 6.0e-119 431.8 406 57.9
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.0e-118 431.0 287 75.6
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.8e-110 403.7 415 56.4
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 7.4e-109 398.3 285 68.4
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.8e-102 377.1 264 72.0
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 1.5e-98 364.0 215 84.7
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 5.9e-98 362.1 241 77.2
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 3.3e-93 346.3 418 45.9
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 9.1e-91 338.2 410 48.3
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 1.6e-90 337.4 382 49.2
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.0e-89 334.7 215 78.6
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 1.7e-89 334.0 260 66.2
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 2.5e-88 330.1 318 56.6
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 1.4e-86 324.3 242 66.1
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 6.5e-81 305.4 307 53.1
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 2.5e-80 303.5 412 44.7
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.6e-79 300.8 361 49.9
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 9.8e-77 291.6 366 45.9
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 3.7e-68 263.1 225 62.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 5.2e-62 242.7 166 75.9
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 1.3e-57 228.0 144 77.1
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 2.3e-57 227.3 401 36.2
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 8.0e-55 218.8 137 78.1
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 4.9e-52 209.5 154 71.4
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.5e-48 198.0 179 56.4
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 2.8e-47 193.7 125 76.8
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 5.2e-38 162.9 306 36.3
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 7.6e-37 159.1 407 31.7
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 3.9e-33 146.7 107 72.0
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 5.6e-32 142.9 101 66.3
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 8.1e-31 139.0 94 74.5
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 3.1e-30 137.1 157 49.7
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 4.0e-30 136.7 119 63.9
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 2.0e-21 107.8 218 33.0
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 9.9e-21 105.5 363 27.3
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.6e-18 98.2 113 53.1
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.1e-18 97.8 95 48.4
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 4.6e-18 96.7 65 70.8
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 1.6e-15 88.2 54 79.6
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.3e-12 78.6 79 51.9


User provided reference genes

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