Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0199 Tripterygium wilfordii HOM05D006863 ORTHO05D009101 7.0e-104 380.6 184 100.0
Prupe.1G308400 Prunus persica HOM05D006863 ORTHO05D009101 4.9e-89 331.3 184 85.3
Dinv04484 Davidia involucrata HOM05D006863 ORTHO05D009101 1.2e-87 326.6 184 81.0
QL01p043996 Quercus lobata HOM05D006863 ORTHO05D009101 3.5e-87 325.1 183 83.6
Thecc.02G357800 Theobroma cacao HOM05D006863 ORTHO05D009101 6.0e-87 324.3 182 81.9
MD13G1044100 Malus domestica HOM05D006863 ORTHO05D009101 1.3e-86 323.2 184 82.6
Gohir.1Z049378 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.6e-86 320.5 182 80.2
Gohir.A13G053600 Gossypium hirsutum HOM05D006863 ORTHO05D009101 8.6e-86 320.5 182 80.2
Cpa.g.sc1.191 Carica papaya HOM05D006863 ORTHO05D009101 1.9e-85 319.3 182 80.8
CSS0023691 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 2.5e-85 318.9 184 78.8
Rhsim09G0110000 Rhododendron simsii HOM05D006863 ORTHO05D009101 4.3e-85 318.2 184 78.8
RcHm_v2.0_Chr4g0435511 Rosa chinensis HOM05D006863 ORTHO05D009101 5.6e-85 317.8 184 81.5
vmacro10546 Vaccinium macrocarpon HOM05D006863 ORTHO05D009101 5.6e-85 317.8 184 78.8
Gorai.013G081400 Gossypium raimondii HOM05D006863 ORTHO05D009101 1.2e-84 316.6 182 79.1
FvH4_4g27661 Fragaria vesca HOM05D006863 ORTHO05D009101 1.6e-84 316.2 182 81.9
CANSAT56G0117 Cannabis sativa HOM05D006863 ORTHO05D009101 2.1e-84 315.8 186 80.1
Ciclev10031676m.g Citrus clementina HOM05D006863 ORTHO05D009101 2.1e-84 315.8 182 80.8
FAN12G1275 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.1e-84 315.8 182 81.3
Atru.chr11.1297 Acer truncatum HOM05D006863 ORTHO05D009101 2.8e-84 315.5 184 78.8
FAN22G1855 Fragaria x ananassa HOM05D006863 ORTHO05D009101 2.8e-84 315.5 184 81.0
Gohir.D13G071100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 2.8e-84 315.5 182 79.1
Manes.14G100000 Manihot esculenta HOM05D006863 ORTHO05D009101 4.7e-84 314.7 184 77.7
GSVIVG01011920001 Vitis vinifera HOM05D006863 ORTHO05D009101 6.2e-84 314.3 182 81.9
Lj3C1017T9 Lonicera japonica HOM05D006863 ORTHO05D009101 8.0e-84 313.9 182 80.2
Sabra10G0096600 Salix brachista HOM05D006863 ORTHO05D009101 1.1e-83 313.5 184 80.4
HanXRQChr17g0552211 Helianthus annuus HOM05D006863 ORTHO05D009101 2.0e-82 309.3 184 75.0
DCAR_026725 Daucus carota HOM05D006863 ORTHO05D009101 2.6e-82 308.9 182 77.5
Potri.010G127200 Populus trichocarpa HOM05D006863 ORTHO05D009101 3.4e-82 308.5 181 80.1
TAR371G0467 Trochodendron aralioides HOM05D006863 ORTHO05D009101 5.8e-82 307.8 184 76.1
TPR.G38252 Trifolium pratense HOM05D006863 ORTHO05D009101 1.3e-81 306.6 181 75.7
Lalb_Chr17g0342021 Lupinus albus HOM05D006863 ORTHO05D009101 3.7e-81 305.1 181 75.7
CsaV3_6G003370 Cucumis sativus L. HOM05D006863 ORTHO05D009101 8.3e-81 303.9 184 75.5
Duzib251G0889 Durio zibethinus HOM05D006863 ORTHO05D009101 1.1e-80 303.5 182 78.6
Eucgr.G02336 Eucalyptus grandis HOM05D006863 ORTHO05D009101 1.1e-80 303.5 180 77.8
Thhalv10004539m.g Eutrema salsugineum HOM05D006863 ORTHO05D009101 1.4e-80 303.1 182 76.9
Aa31LG2G6540 Aethionema arabicum HOM05D006863 ORTHO05D009101 2.4e-80 302.4 182 76.4
Phvul.002G082500 Phaseolus vulgaris HOM05D006863 ORTHO05D009101 1.6e-79 299.7 181 75.1
ECA246G5009 Erigeron canadensis HOM05D006863 ORTHO05D009101 2.1e-79 299.3 182 73.1
Medtr5g054910 Medicago truncatula HOM05D006863 ORTHO05D009101 2.1e-79 299.3 181 75.7
Glyma.08G260300 Glycine max HOM05D006863 ORTHO05D009101 2.7e-79 298.9 181 74.6
Sp2g15050 Schrenkiella parvula HOM05D006863 ORTHO05D009101 4.6e-79 298.1 182 76.4
Sed0022103 Sechium edule HOM05D006863 ORTHO05D009101 4.6e-79 298.1 184 73.4
Sopen04g002190 Solanum pennellii HOM05D006863 ORTHO05D009101 6.0e-79 297.7 182 74.2
AT3G25805 Arabidopsis thaliana HOM05D006863 ORTHO05D009101 7.8e-79 297.4 182 75.3
PGSC0003DMG401015876 Solanum tuberosum HOM05D006863 ORTHO05D009101 7.8e-79 297.4 182 74.2
Lj2g0005111 Lotus japonicus HOM05D006863 ORTHO05D009101 1.3e-78 296.6 180 75.6
A09p25060 Brassica napus HOM05D006863 ORTHO05D005487 2.3e-78 295.8 182 74.7
BraA09t38093Z Brassica rapa HOM05D006863 ORTHO05D005487 2.3e-78 295.8 182 74.7
CARHR146720 Cardamine hirsuta HOM05D006863 ORTHO05D009101 2.3e-78 295.8 182 74.7
AL5G14420 Arabidopsis lyrata HOM05D006863 ORTHO05D009101 3.0e-78 295.4 182 74.2
ClCG08G005160 Citrullus lanatus HOM05D006863 ORTHO05D009101 3.0e-78 295.4 184 73.4
PGR119G0754 Punica granatum HOM05D006863 ORTHO05D009101 3.9e-78 295.0 185 77.3
Nitab4.5_0000280g0240 Nicotiana tabacum HOM05D006863 ORTHO05D009101 5.1e-78 294.7 182 73.6
Peaxi162Scf00086g00919 Petunia axillaris HOM05D006863 ORTHO05D009101 6.6e-78 294.3 182 73.1
THA.LOC104825705 Tarenaya hassleriana HOM05D006863 ORTHO05D009101 1.1e-77 293.5 183 73.8
BcaC04g21415 Brassica carinata HOM05D006863 ORTHO05D005487 2.5e-77 292.4 181 74.0
C09p32050 Brassica napus HOM05D006863 ORTHO05D009101 2.5e-77 292.4 181 74.0
BolC9t56057H Brassica oleracea HOM05D006863 ORTHO05D005487 2.5e-77 292.4 181 74.0
Psat4g144720 Pisum sativum HOM05D006863 ORTHO05D009101 4.3e-77 291.6 177 75.1
Solyc04g007110.4 Solanum lycopersicum HOM05D006863 ORTHO05D009101 4.3e-77 291.6 182 73.1
Sc04g0006570 Simmondsia chinensis HOM05D006863 ORTHO05D009101 5.6e-77 291.2 182 75.8
arahy.Tifrunner.gnm1.ann1.2EV214 Arachis hypogaea HOM05D006863 ORTHO05D009101 7.3e-77 290.8 179 73.2
arahy.Tifrunner.gnm1.ann1.S0U20I Arachis hypogaea HOM05D006863 ORTHO05D009101 7.3e-77 290.8 179 73.2
SalBow8G2780 Salvia bowleyana HOM05D006863 ORTHO05D009101 7.3e-77 290.8 182 72.5
Carub.0005s0363 Capsella rubella HOM05D006863 ORTHO05D009101 9.5e-77 290.4 182 73.6
VMungo1215G1485 Vigna mungo HOM05D006863 ORTHO05D009101 9.5e-77 290.4 181 73.5
Migut.L01080 Erythranthe guttata HOM05D006863 ORTHO05D009101 1.6e-76 289.7 184 72.8
Aqoxy3G00331 Aquilegia oxysepala HOM05D006863 ORTHO05D009101 2.1e-76 289.3 183 73.8
Cc11_g10350 Coffea canephora HOM05D006863 ORTHO05D009101 2.8e-76 288.9 182 72.5
Lsat_1_v5_gn_3_59660 Lactuca sativa HOM05D006863 ORTHO05D009101 8.1e-76 287.3 184 71.7
MBI12_g32420_MAGBIO Magnolia biondii HOM05D006863 ORTHO05D009101 1.8e-75 286.2 184 72.3
Nitab4.5_0009260g0040 Nicotiana tabacum HOM05D006863 ORTHO05D009101 5.2e-75 284.6 182 72.0
PSO447G0382 Papaver somniferum HOM05D006863 ORTHO05D009101 5.2e-75 284.6 184 69.0
CiPaw.15G005400 Carya illinoinensis HOM05D006863 ORTHO05D009101 1.5e-74 283.1 155 85.2
PSO210G1549 Papaver somniferum HOM05D006863 ORTHO05D009101 1.5e-74 283.1 184 69.0
SGA_v2.0_scaffold32G13125 Striga asiatica HOM05D006863 ORTHO05D009101 2.0e-74 282.7 182 68.1
EL10Ac6g14444 Beta vulgaris HOM05D006863 ORTHO05D009101 1.3e-73 280.0 177 71.8
unitig_22.g6873 Utricularia gibba HOM05D001580 ORTHO05D009101 2.2e-73 279.3 181 69.6
Ah.03g137770 Amaranthus hybridus HOM05D006863 ORTHO05D005487 2.4e-72 275.8 177 68.9
Glyma.20G042600 Glycine max HOM05D006863 ORTHO05D009101 7.1e-72 274.2 164 74.4
arahy.Tifrunner.gnm1.ann1.PE9U7E Arachis hypogaea HOM05D006863 ORTHO05D009101 3.5e-71 271.9 213 61.0
MELO3C011551.2 Cucumis melo HOM05D006863 ORTHO05D009101 1.3e-70 270.0 170 72.4
Os04g0462300 Oryza sativa ssp. japonica HOM05D006863 ORTHO05D009101 1.3e-70 270.0 182 68.1
AUR62035252 Chenopodium quinoa HOM05D006863 ORTHO05D009101 3.9e-70 268.5 177 69.5
Zm00001eb080610 Zea mays HOM05D006863 ORTHO05D009101 5.1e-70 268.1 180 68.9
AUR62002895 Chenopodium quinoa HOM05D006863 ORTHO05D009101 8.6e-70 267.3 177 70.6
Haze_17458 Corylus avellana HOM05D006863 ORTHO05D009101 4.3e-69 265.0 184 71.2
MSTRG.824 Avicennia marina HOM05D006863 ORTHO05D009101 9.6e-69 263.8 182 65.9
Actinidia14870 Actinidia chinensis HOM05D006863 ORTHO05D009101 1.8e-67 259.6 149 79.9
Nn4g23802 Nelumbo nucifera HOM05D006863 ORTHO05D009101 6.8e-67 257.7 155 75.5
HPP92_023480 Vanilla planifolia HOM05D006863 ORTHO05D009101 6.8e-67 257.7 186 64.5
BcaB07g30631 Brassica carinata HOM05D001825 ORTHO05D009101 2.0e-66 256.1 159 73.6
Peaxi162Scf00086g00918 Petunia axillaris HOM05D006863 ORTHO05D009101 6.4e-65 251.1 182 64.8
AUR62002896 Chenopodium quinoa HOM05D006863 ORTHO05D009101 1.3e-62 243.4 165 67.9
SEGI_08911 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 8.7e-62 240.7 183 61.7
SEGI_20209 Sequoiadendron giganteum HOM05D006863 ORTHO05D009101 8.7e-62 240.7 183 61.7
COL.COLO4_07899 Corchorus olitorius HOM05D006863 ORTHO05D009101 2.8e-60 235.7 182 64.3
ATR0141G001 Amborella trichopoda HOM05D006863 ORTHO05D009101 4.0e-59 231.9 181 59.7
CSS0005134 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.6e-58 227.6 143 72.0
CSS0013896 Camellia sinensis var. sinensis HOM05D006863 ORTHO05D009101 7.6e-58 227.6 143 72.0
Mapoly0073s0050 Marchantia polymorpha HOM05D006863 ORTHO05D009101 1.9e-56 223.0 188 56.9
Ca_27358_v3 Cicer arietinum L. HOM05D006863 ORTHO05D009101 4.3e-53 211.8 182 58.8
Gorai.012G052200 Gossypium raimondii HOM05D006863 ORTHO05D009101 3.1e-51 205.7 131 70.2
Gohir.D04G047100 Gossypium hirsutum HOM05D006863 ORTHO05D009101 9.9e-50 200.7 131 68.7
Pp3c1_42010 Physcomitrium patens HOM05D006863 ORTHO05D009101 2.7e-47 192.6 173 52.0
SMO111G0216 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 3.1e-43 179.1 174 47.7
Gohir.D11G195601 Gossypium hirsutum HOM05D006863 ORTHO05D009101 1.5e-42 176.8 131 63.4
AagrBONN_evm.TU.Sc2ySwM_117.2959 Anthoceros agrestis HOM05D006863 ORTHO05D009101 1.2e-34 150.6 144 52.1
MD16G1044900 Malus domestica HOM05D006863 ORTHO05D009101 1.9e-32 143.3 92 73.9
SMO358G0636 Selaginella moellendorffii HOM05D006863 ORTHO05D009101 3.8e-25 119.0 129 45.0
Hund25085 Selenicereus undatus HOM05D006863 ORTHO05D009101 3.8e-17 92.4 45 88.9
Cre02.g088500 Chlamydomonas reinhardtii HOM05D002745 ORTHO05D002945 1.8e-14 83.6 192 31.2
PRCOL_00006784 Prasinoderma coloniale HOM05D006863 ORTHO05D002945 3.7e-12 75.9 183 31.1
MCO04G047 Micromonas commoda HOM05D006863 ORTHO05D002945 2.4e-11 73.2 186 31.2


User provided reference genes

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