Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0183 Tripterygium wilfordii HOM05D007757 ORTHO05D009619 3.6e-61 238.0 117 100.0
Duzib248G1397 Durio zibethinus HOM05D007757 ORTHO05D009619 3.5e-24 115.2 120 52.5
COL.COLO4_37757 Corchorus olitorius HOM05D007757 ORTHO05D009619 6.0e-24 114.4 90 58.9
Thecc.02G230200 Theobroma cacao HOM05D007757 ORTHO05D009619 1.7e-23 112.8 114 50.0
Haze_17487 Corylus avellana HOM05D007757 ORTHO05D009619 4.7e-21 104.8 126 44.4
CiPaw.15G085600 Carya illinoinensis HOM05D007757 ORTHO05D009619 4.4e-19 98.2 129 42.6
Sabra10G0094600 Salix brachista HOM05D007757 ORTHO05D009619 5.8e-19 97.8 130 46.2
Actinidia16654 Actinidia chinensis HOM05D007757 ORTHO05D009619 1.4e-17 93.2 116 43.1
DCAR_030156 Daucus carota HOM05D007757 ORTHO05D009619 9.2e-17 90.5 73 53.4
Manes.06G067700 Manihot esculenta HOM05D007757 ORTHO05D009619 2.1e-16 89.4 112 42.9
Peaxi162Scf00382g00073 Petunia axillaris HOM05D007757 ORTHO05D009619 2.7e-16 89.0 121 42.1
Potri.010G124700 Populus trichocarpa HOM05D007757 ORTHO05D009619 3.5e-16 88.6 129 41.9
TPR.G1503 Trifolium pratense HOM05D007757 ORTHO05D009619 3.5e-16 88.6 96 44.8
Actinidia14892 Actinidia chinensis HOM05D007757 ORTHO05D009619 7.8e-16 87.4 112 37.5
Cpa.g.sc1.36 Carica papaya HOM05D007757 ORTHO05D009619 7.8e-16 87.4 110 48.2
Lalb_Chr02g0145961 Lupinus albus HOM05D007757 ORTHO05D009619 1.0e-15 87.0 123 44.7
Gorai.002G217900 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.3e-15 86.7 117 44.4
Gohir.D01G175600 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.3e-15 85.9 117 44.4
Ca_11172_v3 Cicer arietinum L. HOM05D007757 ORTHO05D009619 3.0e-15 85.5 134 39.6
Peaxi162Scf00382g00086 Petunia axillaris HOM05D007757 ORTHO05D009619 5.1e-15 84.7 120 37.5
Lalb_Chr06g0166051 Lupinus albus HOM05D007757 ORTHO05D009619 6.6e-15 84.3 58 65.5
THA.LOC104800008 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 1.9e-14 82.8 47 70.2
BcaC03g14960 Brassica carinata HOM05D007757 ORTHO05D009619 2.5e-14 82.4 55 69.1
C02p24780 Brassica napus HOM05D007757 ORTHO05D009619 2.5e-14 82.4 55 69.1
BolC2t08570H Brassica oleracea HOM05D007757 ORTHO05D009619 2.5e-14 82.4 55 69.1
CANSAT01G0578 Cannabis sativa HOM05D007757 ORTHO05D009619 4.3e-14 81.6 67 58.2
Nitab4.5_0000791g0090 Nicotiana tabacum HOM05D007757 ORTHO05D009619 4.3e-14 81.6 122 39.3
THA.LOC104821934 Tarenaya hassleriana HOM05D007757 ORTHO05D009619 4.3e-14 81.6 114 40.4
Medtr1g110790 Medicago truncatula HOM05D007757 ORTHO05D009619 7.3e-14 80.9 125 38.4
BcaB05g24389 Brassica carinata HOM05D007757 ORTHO05D009619 1.2e-13 80.1 52 69.2
BraA02t06576Z Brassica rapa HOM05D007757 ORTHO05D009619 1.2e-13 80.1 52 69.2
Gorai.012G123000 Gossypium raimondii HOM05D007757 ORTHO05D009619 1.2e-13 80.1 116 41.4
VMungo0720G1194 Vigna mungo HOM05D007757 ORTHO05D009619 1.2e-13 80.1 62 54.8
Phvul.007G027400 Phaseolus vulgaris HOM05D007757 ORTHO05D009619 1.6e-13 79.7 62 56.5
Gohir.D04G138100 Gossypium hirsutum HOM05D007757 ORTHO05D009619 2.1e-13 79.3 116 44.0
CAN.G610.82 Capsicum annuum HOM05D007757 ORTHO05D009619 2.8e-13 79.0 120 38.3
MD13G1041700 Malus domestica HOM05D007757 ORTHO05D009619 2.8e-13 79.0 104 45.2
A02p15100 Brassica napus HOM05D007757 ORTHO05D009619 6.2e-13 77.8 55 65.5
Solyc05g009340.1 Solanum lycopersicum HOM05D007757 ORTHO05D009619 1.1e-12 77.0 124 37.1
Ciclev10017153m.g Citrus clementina HOM05D007757 ORTHO05D009619 1.4e-12 76.6 120 42.5
Sp5g23570 Schrenkiella parvula HOM05D007757 ORTHO05D009619 1.4e-12 76.6 57 61.4
BcaC08g46271 Brassica carinata HOM05D007757 ORTHO05D009619 1.8e-12 76.3 55 61.8
Sopen05g005100 Solanum pennellii HOM05D007757 ORTHO05D009619 1.8e-12 76.3 124 36.3
PGSC0003DMG400014580 Solanum tuberosum HOM05D007757 ORTHO05D009619 1.8e-12 76.3 126 36.5
Psat6g227960 Pisum sativum HOM05D007757 ORTHO05D009619 3.1e-12 75.5 115 37.4
Prupe.1G311500 Prunus persica HOM05D007757 ORTHO05D009619 3.1e-12 75.5 130 41.5
BcaB03g15824 Brassica carinata HOM05D007757 ORTHO05D009619 4.0e-12 75.1 55 60.0
Nn3g17018 Nelumbo nucifera HOM05D021434 ORTHO05D009619 4.0e-12 75.1 110 42.7
CARHR061280 Cardamine hirsuta HOM05D007757 ORTHO05D009619 5.2e-12 74.7 43 67.4
Glyma.20G115900 Glycine max HOM05D007757 ORTHO05D009619 5.2e-12 74.7 63 50.8
A07p34900 Brassica napus HOM05D007757 ORTHO05D009619 8.9e-12 73.9 84 42.9
C06p41430 Brassica napus HOM05D007757 ORTHO05D009619 8.9e-12 73.9 84 42.9
BolC6t39280H Brassica oleracea HOM05D007757 ORTHO05D009619 8.9e-12 73.9 84 42.9
Glyma.10G274100 Glycine max HOM05D007757 ORTHO05D009619 8.9e-12 73.9 61 52.5
Carub.0002s1501 Capsella rubella HOM05D007757 ORTHO05D009619 2.0e-11 72.8 52 59.6
FvH4_4g27340 Fragaria vesca HOM05D007757 ORTHO05D009619 2.0e-11 72.8 139 38.8
FAN12G3266 Fragaria x ananassa HOM05D007757 ORTHO05D009619 2.0e-11 72.8 139 38.8
FAN12G3307 Fragaria x ananassa HOM05D007757 ORTHO05D009619 2.0e-11 72.8 139 38.8
Nn4g23846 Nelumbo nucifera HOM05D021434 ORTHO05D009619 2.0e-11 72.8 114 37.7
Thhalv10019384m.g Eutrema salsugineum HOM05D007757 ORTHO05D009619 3.4e-11 72.0 43 67.4
CARHR026040 Cardamine hirsuta HOM05D007757 ORTHO05D009619 7.5e-11 70.9 51 52.9
Nn3g17848 Nelumbo nucifera HOM05D021434 ORTHO05D009619 7.5e-11 70.9 117 37.6
Cc11_g10120 Coffea canephora HOM05D007757 ORTHO05D009619 1.3e-10 70.1 125 36.8
RcHm_v2.0_Chr4g0435141 Rosa chinensis HOM05D007757 ORTHO05D009619 1.7e-10 69.7 132 38.6
AL2G27370 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 2.2e-10 69.3 43 62.8
AT1G68500 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 2.9e-10 68.9 45 60.0
FAN07G0332 Fragaria x ananassa HOM05D007757 ORTHO05D009619 3.7e-10 68.6 139 38.8
MSTRG.2233 Avicennia marina HOM05D007757 ORTHO05D009619 1.4e-09 66.6 97 33.0
Rhsim09G0107900 Rhododendron simsii HOM05D007757 ORTHO05D009619 1.4e-09 66.6 115 36.5
AT1G25422 Arabidopsis thaliana HOM05D007757 ORTHO05D009619 3.2e-09 65.5 43 58.1
Migut.E00343 Erythranthe guttata HOM05D007757 ORTHO05D009619 3.2e-09 65.5 123 35.0
MD16G1042600 Malus domestica HOM05D007757 ORTHO05D009619 4.1e-09 65.1 44 56.8
AL1G39890 Arabidopsis lyrata HOM05D007757 ORTHO05D009619 1.2e-08 63.5 41 58.5
Carub.0001s2507 Capsella rubella HOM05D007757 ORTHO05D009619 1.2e-08 63.5 41 58.5
Lj5g0000209 Lotus japonicus HOM05D007757 ORTHO05D009619 1.2e-08 63.5 63 47.6
Sc11g0003440 Simmondsia chinensis HOM05D007757 ORTHO05D009619 2.7e-08 62.4 103 35.9
BcaB03g14042 Brassica carinata HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
BcaC06g35205 Brassica carinata HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
A07p12600 Brassica napus HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
C07p18700 Brassica napus HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
BolC7t42380H Brassica oleracea HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
BraA07t29038Z Brassica rapa HOM05D007757 ORTHO05D009619 1.0e-07 60.5 47 48.9
Sp1g22790 Schrenkiella parvula HOM05D007757 ORTHO05D009619 1.3e-07 60.1 47 48.9
SGA_v2.0_scaffold36G14535 Striga asiatica HOM05D007757 ORTHO05D009619 3.0e-07 58.9 57 36.8
AUR62035218 Chenopodium quinoa HOM05D007757 ORTHO05D009619 9.5e-06 53.9 60 45.0


User provided reference genes

Program Settings