Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 2.6e-104 382.1 197 100.0
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 1.3e-68 263.5 198 73.7
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 4.3e-67 258.5 203 70.0
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 5.3e-65 251.5 199 69.8
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 2.0e-64 249.6 199 69.3
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 3.4e-64 248.8 199 67.8
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 2.2e-63 246.1 204 70.1
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.9e-63 245.0 197 66.0
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 5.4e-62 241.5 199 68.3
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 9.3e-62 240.7 198 67.2
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 9.3e-62 240.7 197 65.5
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.6e-61 240.0 205 66.3
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 6.0e-61 238.0 199 65.3
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 6.0e-61 238.0 199 68.3
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 1.0e-60 237.3 197 66.5
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 1.3e-60 236.9 207 65.7
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 2.3e-60 236.1 200 68.5
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 5.1e-60 235.0 199 64.8
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 6.6e-60 234.6 197 67.0
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 1.1e-59 233.8 191 69.1
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 1.1e-59 233.8 197 66.0
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 2.5e-59 232.6 209 63.2
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.3e-59 231.9 197 65.0
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 7.3e-59 231.1 197 63.5
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 3.6e-58 228.8 228 60.1
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 3.6e-58 228.8 205 62.4
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 3.6e-58 228.8 197 65.0
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 4.8e-58 228.4 199 64.8
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 8.1e-58 227.6 197 65.5
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 4.0e-57 225.3 199 64.3
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 5.3e-57 224.9 197 64.0
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 9.0e-57 224.2 199 64.8
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.2e-56 223.8 204 61.8
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 3.4e-56 222.2 204 60.3
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 3.4e-56 222.2 197 63.5
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 3.8e-55 218.8 206 57.3
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 6.4e-55 218.0 204 59.3
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 8.4e-55 217.6 204 59.3
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 8.4e-55 217.6 204 59.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 1.1e-54 217.2 207 59.9
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.4e-54 216.9 206 60.7
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 1.4e-54 216.9 208 57.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 1.9e-54 216.5 198 63.6
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 5.4e-54 214.9 203 59.1
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 5.4e-54 214.9 202 61.4
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 9.3e-54 214.2 199 61.8
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.2e-53 213.8 190 61.6
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 2.1e-53 213.0 207 58.5
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 2.7e-53 212.6 199 59.8
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 7.9e-53 211.1 209 57.9
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.3e-52 210.3 201 59.2
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 2.3e-52 209.5 216 55.6
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 3.0e-52 209.1 206 55.8
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 1.1e-51 207.2 205 59.0
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 3.3e-51 205.7 148 73.0
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 4.3e-51 205.3 190 61.6
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.1e-50 203.0 199 59.8
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 4.0e-49 198.7 146 69.9
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 2.0e-48 196.4 214 55.6
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 4.5e-48 195.3 161 64.0
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 4.5e-48 195.3 202 57.4
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 4.5e-48 195.3 253 50.6
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 7.6e-48 194.5 205 57.6
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.0e-47 194.1 160 66.2
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.0e-47 194.1 201 57.2
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.3e-47 193.7 207 55.1
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 2.9e-47 192.6 204 54.9
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 1.4e-46 190.3 201 55.7
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 3.2e-46 189.1 211 52.6
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 4.2e-46 188.7 199 56.3
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 4.2e-46 188.7 222 52.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 1.6e-45 186.8 201 55.2
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 2.1e-45 186.4 199 56.3
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 3.5e-45 185.7 206 52.9
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.1e-43 180.6 206 51.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 1.1e-43 180.6 185 56.8
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 5.7e-43 178.3 226 48.2
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 5.7e-43 178.3 206 50.5
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 5.7e-43 178.3 206 50.5
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 7.4e-43 177.9 207 51.2
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 1.3e-42 177.2 213 48.4
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 5.3e-41 171.8 221 48.4
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 1.3e-39 167.2 215 47.9
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 3.8e-39 165.6 215 49.3
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 5.0e-39 165.2 203 48.3
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 6.5e-39 164.9 210 47.6
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 1.9e-38 163.3 195 47.2
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 1.6e-37 160.2 212 48.6
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 1.6e-37 160.2 201 49.3
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 2.3e-36 156.4 229 45.4
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 4.1e-33 145.6 147 55.1
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 5.0e-31 138.7 135 60.0
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 1.6e-29 133.7 120 60.8
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 5.1e-28 128.6 198 40.9
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 6.7e-28 128.3 212 43.9
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 5.7e-27 125.2 198 42.4
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 7.4e-27 124.8 122 56.6
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 4.1e-25 119.0 196 42.9
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 6.9e-25 118.2 130 52.3
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 5.5e-22 108.6 126 51.6
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 1.5e-16 90.5 83 59.0
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.0e-15 85.5 93 51.6
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 2.2e-10 70.1 87 49.4
Pp3c14_1800 Physcomitrium patens HOM05D030917 ORTHO05D009223 8.5e-07 58.2 177 24.9


User provided reference genes

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