Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 0.0e+00 1619.4 902 100.0
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 5.3e-306 1054.3 824 65.9
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 7.0e-306 1053.9 820 67.9
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 7.7e-305 1050.4 826 66.2
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.2e-304 1048.9 826 65.7
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 1.1e-303 1046.6 820 66.0
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 4.7e-302 1041.2 827 65.4
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 2.0e-300 1035.8 803 66.1
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.3e-296 1023.1 825 63.5
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.2e-295 1018.1 847 63.6
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 7.2e-295 1017.3 825 63.3
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 1.6e-294 1016.1 804 63.8
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.8e-293 1010.7 809 66.6
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 5.7e-292 1007.7 825 64.4
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 1.1e-290 1003.4 793 66.6
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 4.1e-290 1001.5 820 65.5
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 5.9e-289 997.7 819 65.3
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 2.3e-288 995.7 809 65.5
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 2.9e-288 995.3 804 65.0
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 2.5e-287 992.3 823 63.1
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 4.0e-285 984.9 797 66.9
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.0e-284 982.6 812 64.5
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 7.5e-284 980.7 812 64.5
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.7e-280 969.5 807 64.2
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 8.6e-280 967.2 792 64.9
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 9.5e-279 963.8 762 66.0
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 1.6e-278 963.0 764 65.8
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 2.1e-278 962.6 812 62.8
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 4.7e-278 961.4 825 61.8
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 1.8e-277 959.5 762 65.2
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 5.2e-277 958.0 809 63.2
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.3e-275 953.4 690 69.9
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 6.4e-275 951.0 825 60.1
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 1.1e-274 950.3 768 64.6
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 7.8e-273 944.1 583 78.0
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.0e-272 943.7 790 61.0
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.4e-269 933.3 686 66.5
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 2.3e-269 932.6 771 62.5
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 6.8e-269 931.0 731 66.1
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 2.2e-267 926.0 808 59.4
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.9e-267 925.6 804 60.8
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 4.6e-265 918.3 800 61.5
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 7.8e-265 917.5 687 70.0
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 8.6e-264 914.1 792 64.0
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 9.5e-263 910.6 801 62.4
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 1.8e-261 906.4 801 63.4
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 3.1e-261 905.6 667 67.2
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 2.0e-260 902.9 812 61.9
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 7.6e-260 901.0 801 61.7
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 9.9e-260 900.6 911 56.0
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 2.2e-259 899.4 821 60.2
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 3.7e-259 898.7 822 60.0
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 1.4e-258 896.7 803 60.9
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 1.9e-258 896.3 827 60.5
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.0e-256 889.0 791 59.0
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 3.9e-256 888.6 739 64.5
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 3.9e-256 888.6 819 59.1
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 8.6e-256 887.5 824 60.4
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 4.3e-255 885.2 808 59.3
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 9.6e-255 884.0 803 58.2
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 9.6e-255 884.0 778 61.8
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 1.2e-254 883.6 813 60.4
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 3.6e-254 882.1 530 74.5
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 1.4e-253 880.2 765 62.4
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 3.8e-251 872.1 775 62.2
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 2.4e-250 869.4 814 58.5
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 7.1e-250 867.8 796 60.6
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 1.6e-249 866.7 682 65.5
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 8.7e-248 860.9 809 58.6
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.0e-244 849.7 801 57.1
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 1.0e-240 837.4 796 56.2
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 3.3e-239 832.4 823 56.9
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 9.6e-239 830.9 799 57.3
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 1.3e-238 830.5 798 57.3
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 4.8e-238 828.6 889 56.2
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 1.1e-237 827.4 886 55.5
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 1.4e-237 827.0 814 56.4
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 3.1e-237 825.9 754 59.8
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 3.4e-236 822.4 790 56.3
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 1.4e-234 817.0 811 57.2
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 5.5e-234 815.1 691 64.7
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 4.6e-233 812.0 798 56.0
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 2.3e-232 809.7 814 56.9
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 1.8e-229 800.0 718 62.0
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 1.0e-227 794.3 789 56.9
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 2.1e-222 776.5 619 67.0
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.4e-213 747.3 793 54.2
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 1.2e-183 647.9 551 60.6
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.4e-165 587.0 597 57.8
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 1.9e-157 560.8 819 45.7
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 3.5e-156 556.6 494 59.7
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 3.3e-154 550.1 461 57.5
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 9.5e-154 548.5 585 48.4
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.2e-153 548.1 332 73.5
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 2.1e-153 547.4 386 68.1
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 5.2e-136 489.6 411 62.3
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 3.2e-133 480.3 587 45.7
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.6e-124 451.4 284 72.2
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 6.2e-113 412.9 348 56.0
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.3e-107 394.4 408 50.2
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 4.5e-95 353.6 188 82.4
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 1.0e-94 352.4 537 47.1
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 3.2e-93 347.4 436 52.3
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 2.9e-86 324.3 330 51.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 1.1e-85 322.4 196 75.5
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 1.7e-73 282.0 167 76.0
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 1.5e-66 258.8 323 52.9
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 5.8e-42 177.2 126 71.4
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-31 142.9 375 29.9
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 2.3e-30 138.7 81 75.3
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 1.9e-24 119.0 114 50.9
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 4.0e-19 101.3 77 62.3
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 1.7e-17 95.9 72 52.8
Potri.004G188432 Populus trichocarpa HOM05D007000 ORTHO05D030830 3.1e-11 75.1 96 45.8


User provided reference genes

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