Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1498 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 4.9e-163 577.8 304 100.0
TWI53G1221 Tripterygium wilfordii HOM05D006207 ORTHO05D007868 2.8e-142 508.8 305 88.5
Manes.09G111300 Manihot esculenta HOM05D006207 ORTHO05D007868 3.2e-85 319.3 315 57.8
CiPaw.09G215000 Carya illinoinensis HOM05D006207 ORTHO05D007868 5.1e-83 312.0 313 58.8
Ciclev10012309m.g Citrus clementina HOM05D006207 ORTHO05D007868 4.7e-81 305.4 309 57.3
Gohir.A01G229800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 3.1e-80 302.8 310 57.4
Actinidia29070 Actinidia chinensis HOM05D006207 ORTHO05D007868 4.0e-80 302.4 320 55.9
COL.COLO4_14454 Corchorus olitorius HOM05D006207 ORTHO05D007868 5.2e-80 302.0 301 58.5
Lj3g0024527 Lotus japonicus HOM05D006207 ORTHO05D007868 5.2e-80 302.0 305 57.4
Duzib093G0843 Durio zibethinus HOM05D006207 ORTHO05D007868 1.2e-79 300.8 310 57.1
Thecc.05G007100 Theobroma cacao HOM05D006207 ORTHO05D007868 2.0e-79 300.1 309 56.0
Gohir.D01G219700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 5.8e-79 298.5 310 56.5
Atru.chr8.2331 Acer truncatum HOM05D006207 ORTHO05D007868 1.7e-78 297.0 319 54.9
Gorai.002G266400 Gossypium raimondii HOM05D006207 ORTHO05D007868 3.7e-78 295.8 310 56.1
Gohir.A09G167800 Gossypium hirsutum HOM05D006207 ORTHO05D007868 1.6e-76 290.4 311 57.2
Aqoxy1G01290 Aquilegia oxysepala HOM05D006207 ORTHO05D007868 3.5e-76 289.3 333 53.2
Actinidia11552 Actinidia chinensis HOM05D006207 ORTHO05D007868 1.0e-75 287.7 319 55.8
Glyma.01G125600 Glycine max HOM05D006207 ORTHO05D007868 1.0e-75 287.7 303 55.4
Gorai.006G185200 Gossypium raimondii HOM05D006207 ORTHO05D007868 1.0e-75 287.7 310 55.8
Lalb_Chr12g0207271 Lupinus albus HOM05D006207 ORTHO05D007868 1.3e-75 287.3 312 52.6
Sed0003544 Sechium edule HOM05D006207 ORTHO05D007868 1.7e-75 287.0 313 54.6
CsaV3_4G026760 Cucumis sativus L. HOM05D006207 ORTHO05D007868 5.1e-75 285.4 318 54.1
Cpa.g.sc5.234 Carica papaya HOM05D006207 ORTHO05D007868 1.9e-74 283.5 311 53.4
ClCG04G006690 Citrullus lanatus HOM05D006207 ORTHO05D007868 4.3e-74 282.3 316 54.1
arahy.Tifrunner.gnm1.ann1.S95MPE Arachis hypogaea HOM05D006207 ORTHO05D007868 5.6e-74 282.0 336 51.2
CSS0029336 Camellia sinensis var. sinensis HOM05D006207 ORTHO05D007868 5.6e-74 282.0 324 52.8
MELO3C026025.2 Cucumis melo HOM05D006207 ORTHO05D007868 5.6e-74 282.0 316 53.5
Phvul.010G064400 Phaseolus vulgaris HOM05D006207 ORTHO05D007868 7.3e-74 281.6 312 52.9
Dinv35401 Davidia involucrata HOM05D006207 ORTHO05D007868 2.1e-73 280.0 325 51.7
Gohir.D09G163700 Gossypium hirsutum HOM05D006207 ORTHO05D007868 2.8e-73 279.6 310 55.5
CANSAT35G0048 Cannabis sativa HOM05D006207 ORTHO05D007868 6.2e-73 278.5 309 51.5
QL07p033964 Quercus lobata HOM05D006207 ORTHO05D007868 6.2e-73 278.5 311 54.3
GSVIVG01030275001 Vitis vinifera HOM05D006207 ORTHO05D002478 8.1e-73 278.1 304 51.3
RcHm_v2.0_Chr3g0461671 Rosa chinensis HOM05D006207 ORTHO05D007868 1.1e-72 277.7 309 51.5
THA.LOC104823306 Tarenaya hassleriana HOM05D006207 ORTHO05D007868 1.4e-72 277.3 314 49.7
PGR031G0899 Punica granatum HOM05D006207 ORTHO05D007868 1.8e-72 276.9 298 53.7
TAR623G0507 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.8e-72 276.9 320 53.8
arahy.Tifrunner.gnm1.ann1.WBCD4G Arachis hypogaea HOM05D006207 ORTHO05D007868 2.4e-72 276.6 337 49.9
Duzib106G1231 Durio zibethinus HOM05D006207 ORTHO05D007868 4.0e-72 275.8 292 55.5
Sed0019485 Sechium edule HOM05D006207 ORTHO05D007868 5.2e-72 275.4 320 53.4
Sp3g07200 Schrenkiella parvula HOM05D006207 ORTHO05D007868 8.9e-72 274.6 309 50.5
Thhalv10021171m.g Eutrema salsugineum HOM05D006207 ORTHO05D007868 1.7e-70 270.4 310 49.0
Prupe.6G284500 Prunus persica HOM05D006207 ORTHO05D007868 4.9e-70 268.9 313 51.8
AT3G08780 Arabidopsis thaliana HOM05D006207 ORTHO05D007868 1.1e-69 267.7 311 49.5
Dinv12164 Davidia involucrata HOM05D006207 ORTHO05D007868 1.1e-69 267.7 330 50.9
Glyma.U032705 Glycine max HOM05D006207 ORTHO05D007868 2.4e-69 266.5 304 52.6
AL3G19780 Arabidopsis lyrata HOM05D006207 ORTHO05D007868 7.1e-69 265.0 309 49.5
FAN05G3975 Fragaria x ananassa HOM05D006207 ORTHO05D007868 9.3e-69 264.6 309 50.5
C05p59060 Brassica napus HOM05D006207 ORTHO05D007868 4.6e-68 262.3 316 49.4
FAN05G5543 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.6e-68 262.3 306 51.0
Cfa017117 Carpinus fangiana HOM05D006207 ORTHO05D007868 7.8e-68 261.5 289 54.7
Psat7g249160 Pisum sativum HOM05D006207 ORTHO05D007868 1.0e-67 261.2 321 50.2
TAR633G0541 Trochodendron aralioides HOM05D006207 ORTHO05D007868 1.0e-67 261.2 317 51.7
BolC5t34558H Brassica oleracea HOM05D006207 ORTHO05D007868 2.3e-67 260.0 315 49.5
A05p40020 Brassica napus HOM05D006207 ORTHO05D007868 6.6e-67 258.5 311 49.8
Nn2g11009 Nelumbo nucifera HOM05D006207 ORTHO05D007868 6.6e-67 258.5 302 51.0
Aa31LG5G18780 Aethionema arabicum HOM05D006207 ORTHO05D007868 8.7e-67 258.1 304 49.3
CARHR083100 Cardamine hirsuta HOM05D006207 ORTHO05D007868 8.7e-67 258.1 305 47.9
Lsat_1_v5_gn_8_103441 Lactuca sativa HOM05D006207 ORTHO05D007868 1.5e-66 257.3 315 49.2
Carub.0003s0791 Capsella rubella HOM05D006207 ORTHO05D007868 1.9e-66 256.9 311 47.3
BraA05t22911Z Brassica rapa HOM05D006207 ORTHO05D007868 2.5e-66 256.5 312 49.7
HanXRQChr16g0510291 Helianthus annuus HOM05D006207 ORTHO05D007868 4.3e-66 255.8 302 51.3
Potri.016G126200 Populus trichocarpa HOM05D006207 ORTHO05D007868 1.3e-65 254.2 312 51.3
PGSC0003DMG400017108 Solanum tuberosum HOM05D006207 ORTHO05D007868 2.8e-65 253.1 322 49.1
Sabra16G0120700 Salix brachista HOM05D006207 ORTHO05D007868 3.6e-65 252.7 312 51.0
FvH4_6g10650 Fragaria vesca HOM05D006207 ORTHO05D007868 4.8e-65 252.3 308 49.0
FAN14G5611 Fragaria x ananassa HOM05D006207 ORTHO05D007868 4.8e-65 252.3 308 49.0
Oeu038722.1 Olea europaea HOM05D006207 ORTHO05D007868 6.2e-65 251.9 307 47.6
Sopen09g008460 Solanum pennellii HOM05D006207 ORTHO05D007868 6.2e-65 251.9 322 49.1
VMungo0331G1865 Vigna mungo HOM05D006207 ORTHO05D007868 1.4e-64 250.8 298 51.0
EL10Ac5g12487 Beta vulgaris HOM05D006207 ORTHO05D007868 2.4e-64 250.0 309 50.8
FAN09G2678 Fragaria x ananassa HOM05D006207 ORTHO05D007868 5.3e-64 248.8 308 48.4
Cc06_g00770 Coffea canephora HOM05D006207 ORTHO05D002478 1.2e-63 247.7 315 48.6
Rhsim04G0125000 Rhododendron simsii HOM05D006207 ORTHO05D007868 2.0e-63 246.9 309 49.5
vmacro08907 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 1.7e-62 243.8 317 47.9
Oeu057638.1 Olea europaea HOM05D006207 ORTHO05D007868 4.9e-62 242.3 307 46.9
TPR.G5270 Trifolium pratense HOM05D006207 ORTHO05D007868 6.4e-62 241.9 312 47.8
Sc01g0005970 Simmondsia chinensis HOM05D006207 ORTHO05D007868 8.4e-62 241.5 320 46.9
vmacro20324 Vaccinium macrocarpon HOM05D006207 ORTHO05D007868 5.4e-61 238.8 302 49.3
CAN.G967.4 Capsicum annuum HOM05D006207 ORTHO05D007868 2.7e-60 236.5 317 46.4
Nitab4.5_0015157g0010 Nicotiana tabacum HOM05D006207 ORTHO05D007868 1.0e-59 234.6 299 47.8
DCAR_023998 Daucus carota HOM05D006207 ORTHO05D007868 6.6e-59 231.9 316 46.5
Nitab4.5_0000230g0180 Nicotiana tabacum HOM05D006207 ORTHO05D007868 2.5e-58 229.9 295 47.5
PSO765G0078 Papaver somniferum HOM05D006207 ORTHO05D007868 3.3e-58 229.6 325 44.9
MSTRG.5544 Avicennia marina HOM05D006207 ORTHO05D007868 2.8e-57 226.5 306 45.8
Migut.J00099 Erythranthe guttata HOM05D006207 ORTHO05D007868 3.6e-57 226.1 302 46.0
Peaxi162Scf00744g00339 Petunia axillaris HOM05D006207 ORTHO05D007868 3.6e-57 226.1 327 43.7
unitig_27.g24873 Utricularia gibba HOM05D006207 ORTHO05D007868 2.0e-55 220.3 302 46.7
Medtr4g014250 Medicago truncatula HOM05D006207 ORTHO05D007868 1.7e-54 217.2 308 44.8
Ah.12g059050 Amaranthus hybridus HOM05D006207 ORTHO05D007868 4.9e-54 215.7 289 45.7
CDE07G0940 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.2e-52 211.1 316 44.3
SHI12871 Sapria himalayana HOM05D006207 ORTHO05D007868 4.6e-52 209.1 300 44.7
ECA236G5132 Erigeron canadensis HOM05D006207 ORTHO05D007868 2.3e-51 206.8 313 43.8
BcaC05g29617 Brassica carinata HOM05D006207 ORTHO05D007868 1.9e-50 203.8 298 43.0
MBI03_g07303_MAGBIO Magnolia biondii HOM05D006207 ORTHO05D007868 8.1e-49 198.4 303 43.6
ATR0594G098 Amborella trichopoda HOM05D006207 ORTHO05D007868 1.1e-48 198.0 289 43.6
Lj2C67T4 Lonicera japonica HOM05D006207 ORTHO05D007868 1.5e-47 194.1 203 56.7
CDE06G0694 Ceratophyllum demersum HOM05D006207 ORTHO05D007868 1.1e-45 188.0 302 43.0
HPP92_019707 Vanilla planifolia HOM05D006207 ORTHO05D007868 1.1e-45 188.0 326 42.6
AUR62030762 Chenopodium quinoa HOM05D006207 ORTHO05D007868 1.8e-40 170.6 284 39.4
Solyc09g015180.4 Solanum lycopersicum HOM05D006207 ORTHO05D007868 1.0e-38 164.9 233 44.6
SEGI_14997 Sequoiadendron giganteum HOM05D006207 ORTHO05D007868 1.7e-38 164.1 388 33.2
Lj3P946T49 Lonicera japonica HOM05D006207 ORTHO05D007868 1.6e-36 157.5 183 51.9
Rhsim05G0225500 Rhododendron simsii HOM05D006207 ORTHO05D007868 7.4e-34 148.7 181 46.4
Os07g0540200 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 5.3e-32 142.5 309 36.6
Pp3c3_16910 Physcomitrium patens HOM05D006207 ORTHO05D007868 5.0e-30 136.0 344 31.7
Zm00001eb163300 Zea mays HOM05D006207 ORTHO05D007868 4.2e-29 132.9 310 35.5
AagrBONN_evm.TU.Sc2ySwM_368.1939 Anthoceros agrestis HOM05D006207 ORTHO05D007868 7.9e-28 128.6 387 28.4
Duzib128G0456 Durio zibethinus HOM05D006207 ORTHO05D007868 3.9e-27 126.3 196 44.4
AUR62030533 Chenopodium quinoa HOM05D006207 ORTHO05D007868 2.5e-26 123.6 137 51.8
MD04G1166200 Malus domestica HOM05D006207 ORTHO05D007868 1.8e-24 117.5 160 45.6
Os04g0479300 Oryza sativa ssp. japonica HOM05D006207 ORTHO05D007868 1.5e-23 114.4 308 34.7
CBR_g48858 Chara braunii HOM05D006207 ORTHO05D007868 7.2e-21 105.5 343 28.6
Ca_20352_v3 Cicer arietinum L. HOM05D006207 ORTHO05D007868 1.1e-18 98.2 87 59.8
Zm00001eb421620 Zea mays HOM05D006207 ORTHO05D007868 1.7e-17 94.4 243 31.7
MD04G1166100 Malus domestica HOM05D006207 ORTHO05D007868 3.1e-16 90.1 72 68.1
SalBow6G1507 Salvia bowleyana HOM05D000800 ORTHO05D000658 3.8e-14 83.2 96 43.8
VMungo1215G0839 Vigna mungo HOM05D006207 ORTHO05D007868 4.7e-12 76.3 76 48.7
VMungo1309G1345 Vigna mungo HOM05D006207 ORTHO05D007868 1.8e-08 64.3 68 48.5
Mapoly0060s0108 Marchantia polymorpha HOM05D006207 ORTHO05D007868 4.1e-08 63.2 136 33.1
SalBow2G0248 Salvia bowleyana HOM05D007863 ORTHO05D009265 1.3e-06 58.2 79 40.5


User provided reference genes

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