Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 2.2e-31 138.3 66 100.0
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 5.9e-29 130.2 66 92.4
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.1e-27 125.9 66 90.9
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 4.2e-27 124.0 65 86.2
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 7.2e-27 123.2 65 86.2
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 1.6e-26 122.1 65 84.6
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 2.1e-26 121.7 66 84.8
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 2.1e-26 121.7 66 84.8
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 2.1e-26 121.7 66 86.4
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 2.1e-26 121.7 60 93.3
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 2.1e-26 121.7 60 93.3
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 2.1e-26 121.7 61 88.5
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 3.6e-26 120.9 65 83.1
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 4.7e-26 120.6 65 83.1
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 4.7e-26 120.6 66 83.3
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.7e-26 120.6 61 88.5
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 4.7e-26 120.6 61 88.5
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 6.1e-26 120.2 65 84.6
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 6.1e-26 120.2 63 88.9
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 6.1e-26 120.2 66 86.4
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 8.0e-26 119.8 66 83.3
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 8.0e-26 119.8 61 90.2
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 8.0e-26 119.8 65 84.6
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 8.0e-26 119.8 64 85.9
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 1.0e-25 119.4 61 86.9
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.0e-25 119.4 61 86.9
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.0e-25 119.4 64 85.9
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 1.0e-25 119.4 65 81.5
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 1.8e-25 118.6 66 81.8
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.8e-25 118.6 61 86.9
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 1.8e-25 118.6 61 86.9
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 1.8e-25 118.6 61 86.9
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.8e-25 118.6 61 88.5
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.8e-25 118.6 63 84.1
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 1.8e-25 118.6 64 85.9
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 2.3e-25 118.2 66 81.8
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 2.3e-25 118.2 66 80.3
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 2.3e-25 118.2 65 81.5
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 2.3e-25 118.2 61 88.5
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 2.3e-25 118.2 61 86.9
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 2.3e-25 118.2 65 81.5
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 4.0e-25 117.5 66 81.8
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 6.8e-25 116.7 61 88.5
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 6.8e-25 116.7 64 84.4
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 6.8e-25 116.7 61 83.6
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 8.8e-25 116.3 66 81.8
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.2e-24 115.9 61 85.2
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.2e-24 115.9 64 81.2
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 1.5e-24 115.5 66 78.8
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 1.5e-24 115.5 64 84.4
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 1.5e-24 115.5 64 82.8
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 80.3
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 80.3
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 5.7e-24 113.6 63 84.1
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 5.7e-24 113.6 66 78.8
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 7.5e-24 113.2 64 82.8
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 80.0
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 80.0
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 9.8e-24 112.8 71 80.3
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 9.8e-24 112.8 71 80.3
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 78.5
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 9.8e-24 112.8 65 78.5
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 9.8e-24 112.8 61 83.6
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 65 75.4
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 1.3e-23 112.5 58 86.2
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 1.7e-23 112.1 55 90.9
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.2e-23 111.7 64 78.1
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 8.3e-23 109.8 66 74.2
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 1.4e-22 109.0 64 79.7
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 3.1e-22 107.8 59 84.7
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 7.0e-22 106.7 63 81.0
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 9.1e-22 106.3 64 76.6
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 1.2e-21 105.9 66 72.7
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 2.7e-21 104.8 54 88.9
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 1.1e-19 99.4 55 80.0
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 1.5e-19 99.0 59 71.2
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 2.8e-18 94.7 65 64.6
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 4.7e-18 94.0 63 68.3
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 1.8e-17 92.0 61 67.2
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 4.4e-16 87.4 59 69.5
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 4.9e-15 84.0 64 65.6
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 1.4e-14 82.4 64 65.6
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 2.4e-14 81.6 44 84.1
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 2.9e-12 74.7 36 91.7
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 5.0e-12 73.9 43 74.4
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 1.5e-11 72.4 40 80.0
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.6e-10 68.9 36 86.1
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.1e-10 68.6 36 86.1
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.1e-10 68.6 36 86.1
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 4.7e-10 67.4 55 54.5
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 2.3e-09 65.1 53 50.9
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 2.3e-09 65.1 53 50.9
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 4.0e-09 64.3 38 73.7
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 8.9e-09 63.2 55 50.9
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.5e-08 62.4 42 64.3


User provided reference genes

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