Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1106 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 1.7e-280 968.8 510 100.0
TWI53G0466 Tripterygium wilfordii HOM05D003907 ORTHO05D004819 5.2e-274 947.2 510 97.1
Manes.09G104800 Manihot esculenta HOM05D003907 ORTHO05D004819 4.7e-267 924.1 510 93.5
Manes.09G105700 Manihot esculenta HOM05D003907 ORTHO05D004819 2.9e-264 914.8 510 92.5
GSVIVG01033959001 Vitis vinifera HOM05D003907 ORTHO05D004819 2.9e-264 914.8 510 92.5
Potri.016G116200 Populus trichocarpa HOM05D003907 ORTHO05D004819 8.3e-264 913.3 510 92.0
ClCG04G006990 Citrullus lanatus HOM05D003907 ORTHO05D004819 1.1e-263 912.9 510 92.5
CsaV3_4G026280 Cucumis sativus L. HOM05D003907 ORTHO05D004819 1.4e-263 912.5 510 92.5
Duzib106G0096 Durio zibethinus HOM05D003907 ORTHO05D004819 1.4e-263 912.5 511 92.8
Potri.006G100200 Populus trichocarpa HOM05D003907 ORTHO05D004819 5.4e-263 910.6 510 91.4
Gohir.A09G165200 Gossypium hirsutum HOM05D003907 ORTHO05D004819 7.0e-263 910.2 511 92.8
Thecc.05G016000 Theobroma cacao HOM05D003907 ORTHO05D004819 1.6e-262 909.1 511 92.8
Gohir.D09G160800 Gossypium hirsutum HOM05D003907 ORTHO05D004819 2.0e-262 908.7 511 92.8
Lj2A75G35 Lonicera japonica HOM05D003907 ORTHO05D004819 4.6e-262 907.5 510 92.4
Ciclev10011517m.g Citrus clementina HOM05D003907 ORTHO05D004819 6.0e-262 907.1 511 92.6
Gorai.006G182500 Gossypium raimondii HOM05D003907 ORTHO05D004819 6.0e-262 907.1 511 92.6
CiPaw.09G209200 Carya illinoinensis HOM05D003907 ORTHO05D004819 7.8e-262 906.7 510 92.4
Sabra16G0111700 Salix brachista HOM05D003907 ORTHO05D004819 7.8e-262 906.7 510 91.0
CANSAT35G0110 Cannabis sativa HOM05D003907 ORTHO05D004819 1.7e-261 905.6 510 92.2
Cc06_g01360 Coffea canephora HOM05D003907 ORTHO05D004819 8.6e-261 903.3 510 92.0
Dinv23105 Davidia involucrata HOM05D003907 ORTHO05D004819 1.5e-260 902.5 510 91.4
Atru.chr8.2242 Acer truncatum HOM05D003907 ORTHO05D004819 2.5e-260 901.7 511 91.2
Prupe.6G277300 Prunus persica HOM05D003907 ORTHO05D004819 5.6e-260 900.6 510 90.8
MSTRG.10218 Avicennia marina HOM05D003907 ORTHO05D004819 1.6e-259 899.0 510 90.4
Cfa017208 Carpinus fangiana HOM05D003907 ORTHO05D004819 2.1e-259 898.7 510 92.0
arahy.Tifrunner.gnm1.ann1.NAY5W3 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.8e-259 898.3 510 91.0
arahy.Tifrunner.gnm1.ann1.S2G015 Arachis hypogaea HOM05D003907 ORTHO05D004819 2.8e-259 898.3 510 91.0
Glyma.18G200800 Glycine max HOM05D003907 ORTHO05D004819 4.7e-259 897.5 510 91.4
Lsat_1_v5_gn_9_34621 Lactuca sativa HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 90.4
TAR633G0126 Trochodendron aralioides HOM05D003907 ORTHO05D004819 8.1e-259 896.7 510 91.0
MSTRG.26811 Avicennia marina HOM05D003907 ORTHO05D004819 1.1e-258 896.3 510 90.8
THA.LOC104823300 Tarenaya hassleriana HOM05D003907 ORTHO05D004819 1.1e-258 896.3 510 90.4
Oeu041306.1 Olea europaea HOM05D003907 ORTHO05D004819 1.8e-258 895.6 510 91.0
Sed0026155 Sechium edule HOM05D003907 ORTHO05D004819 5.2e-258 894.0 510 90.6
CAN.G5.12 Capsicum annuum HOM05D003907 ORTHO05D004819 6.8e-258 893.6 510 89.4
QL07p019755 Quercus lobata HOM05D003907 ORTHO05D004819 8.9e-258 893.3 509 90.4
Sed0027660 Sechium edule HOM05D003907 ORTHO05D004819 8.9e-258 893.3 510 90.0
Aqoxy4G02574 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 1.5e-257 892.5 511 89.4
SGA_v2.0_scaffold110G31215 Striga asiatica HOM05D003907 ORTHO05D004819 1.5e-257 892.5 510 89.4
Carub.0006s0037 Capsella rubella HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 88.8
Thhalv10013023m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 89.0
Nn2g11497 Nelumbo nucifera HOM05D003907 ORTHO05D004819 2.6e-257 891.7 510 90.4
AL3G19930 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 4.4e-257 891.0 510 88.6
Glyma.07G149900 Glycine max HOM05D003907 ORTHO05D004819 7.5e-257 890.2 510 90.4
Psat3g128200 Pisum sativum HOM05D003907 ORTHO05D004819 7.5e-257 890.2 510 90.2
CARHR211830 Cardamine hirsuta HOM05D003907 ORTHO05D004819 1.3e-256 889.4 510 88.8
HanXRQChr10g0299881 Helianthus annuus HOM05D003907 ORTHO05D004819 1.3e-256 889.4 510 90.0
Nitab4.5_0000511g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 1.3e-256 889.4 510 90.2
AT5G01460 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 1.7e-256 889.0 510 88.8
Actinidia05367 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.2e-256 888.6 512 90.0
MD12G1166000 Malus domestica HOM05D003907 ORTHO05D004819 2.2e-256 888.6 510 90.0
PGSC0003DMG400023084 Solanum tuberosum HOM05D003907 ORTHO05D004819 3.7e-256 887.9 510 88.8
TAR636G2600 Trochodendron aralioides HOM05D003907 ORTHO05D004819 3.7e-256 887.9 510 89.6
Nitab4.5_0000335g0010 Nicotiana tabacum HOM05D003907 ORTHO05D004819 4.9e-256 887.5 510 90.0
Sopen09g001280 Solanum pennellii HOM05D003907 ORTHO05D004819 4.9e-256 887.5 510 89.0
Solyc09g005310.3 Solanum lycopersicum HOM05D003907 ORTHO05D004819 6.4e-256 887.1 510 88.8
AL6G10610 Arabidopsis lyrata HOM05D003907 ORTHO05D004819 8.3e-256 886.7 510 88.4
CSS0040367 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.4e-255 885.9 511 90.4
Carub.0003s0804 Capsella rubella HOM05D003907 ORTHO05D004819 1.9e-255 885.6 510 88.2
AT3G08930 Arabidopsis thaliana HOM05D003907 ORTHO05D004819 3.2e-255 884.8 510 88.0
MD04G1152700 Malus domestica HOM05D003907 ORTHO05D004819 3.2e-255 884.8 510 89.4
TPR.G13353 Trifolium pratense HOM05D003907 ORTHO05D004819 4.1e-255 884.4 511 89.4
Sp6g40750 Schrenkiella parvula HOM05D003907 ORTHO05D004819 7.1e-255 883.6 510 88.4
Thhalv10020541m.g Eutrema salsugineum HOM05D003907 ORTHO05D004819 3.5e-254 881.3 510 87.8
DCAR_018702 Daucus carota HOM05D003907 ORTHO05D004819 6.0e-254 880.6 511 88.8
Medtr7g068440 Medicago truncatula HOM05D003907 ORTHO05D004819 7.8e-254 880.2 510 89.6
Haze_21003 Corylus avellana HOM05D003907 ORTHO05D004819 1.0e-253 879.8 527 88.4
Migut.L02013 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.3e-253 879.4 510 87.8
Sp3g07320 Schrenkiella parvula HOM05D003907 ORTHO05D004819 1.7e-253 879.0 510 87.6
CARHR083260 Cardamine hirsuta HOM05D003907 ORTHO05D004819 2.3e-253 878.6 510 87.6
PGR004G0735 Punica granatum HOM05D003907 ORTHO05D004819 5.1e-253 877.5 510 89.4
Migut.J00170 Erythranthe guttata HOM05D003907 ORTHO05D004819 1.1e-252 876.3 510 87.8
CSS0038026 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 1.5e-252 875.9 510 88.4
CiPaw.10G156600 Carya illinoinensis HOM05D003907 ORTHO05D004819 1.5e-252 875.9 510 89.2
Ca_20232_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 5.6e-252 874.0 510 88.0
BolC5t34549H Brassica oleracea HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 87.3
Glyma.03G058100 Glycine max HOM05D003907 ORTHO05D004819 9.5e-252 873.2 510 89.0
BcaB04g18559 Brassica carinata HOM05D003907 ORTHO05D004819 1.2e-251 872.8 510 87.1
C05p58960 Brassica napus HOM05D003907 ORTHO05D004819 1.2e-251 872.8 510 87.3
Glyma.01G122100 Glycine max HOM05D003907 ORTHO05D004819 2.1e-251 872.1 510 88.8
BraSC256t45932Z Brassica rapa HOM05D003907 ORTHO05D004819 2.8e-251 871.7 510 87.1
RcHm_v2.0_Chr3g0463141 Rosa chinensis HOM05D003907 ORTHO05D004819 1.4e-250 869.4 510 88.0
Lj3g0019592 Lotus japonicus HOM05D003907 ORTHO05D004819 3.1e-250 868.2 510 87.8
Aqoxy2G00900 Aquilegia oxysepala HOM05D003907 ORTHO05D004819 6.8e-250 867.1 511 88.1
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 2.0e-249 865.5 502 88.8
vmacro11169 Vaccinium macrocarpon HOM05D003907 ORTHO05D004819 3.4e-249 864.8 549 83.6
FvH4_6g11450 Fragaria vesca HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 87.1
FAN14G1433 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 87.1
FAN14G5854 Fragaria x ananassa HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 87.1
SalBow5G2920 Salvia bowleyana HOM05D003907 ORTHO05D004819 3.8e-248 861.3 510 86.3
Lalb_Chr01g0023081 Lupinus albus HOM05D003907 ORTHO05D004819 8.4e-248 860.1 512 88.5
PSO801G0155 Papaver somniferum HOM05D003907 ORTHO05D004819 1.4e-247 859.4 511 87.7
PSO339G6136 Papaver somniferum HOM05D003907 ORTHO05D004819 1.9e-247 859.0 511 87.7
FAN09G4250 Fragaria x ananassa HOM05D003907 ORTHO05D004819 2.4e-247 858.6 510 86.7
Phvul.008G104400 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 7.8e-246 853.6 510 86.1
FAN02G2014 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.0e-245 853.2 510 86.1
Lj3A953T53 Lonicera japonica HOM05D003907 ORTHO05D004819 1.7e-245 852.4 524 84.9
ATR0618G011 Amborella trichopoda HOM05D003907 ORTHO05D004819 5.1e-245 850.9 511 86.5
Ah.12g058610 Amaranthus hybridus HOM05D003907 ORTHO05D004819 6.6e-245 850.5 510 86.5
Hund14296 Selenicereus undatus HOM05D003907 ORTHO05D004819 1.1e-244 849.7 511 86.3
COL.COLO4_14536 Corchorus olitorius HOM05D003907 ORTHO05D004819 3.3e-244 848.2 472 93.6
Lalb_Chr03g0043281 Lupinus albus HOM05D003907 ORTHO05D004819 3.3e-244 848.2 512 86.7
unitig_8.g3229 Utricularia gibba HOM05D003907 ORTHO05D004819 3.3e-244 848.2 510 84.9
A03p36270 Brassica napus HOM05D003907 ORTHO05D004819 2.8e-243 845.1 510 84.9
C03p43910 Brassica napus HOM05D003907 ORTHO05D004819 2.8e-243 845.1 510 84.9
BolC3t16659H Brassica oleracea HOM05D003907 ORTHO05D004819 3.6e-243 844.7 510 84.7
Eucgr.B02811 Eucalyptus grandis HOM05D003907 ORTHO05D004819 4.7e-243 844.3 494 89.5
BraA03t12798Z Brassica rapa HOM05D003907 ORTHO05D004819 8.1e-243 843.6 510 84.7
Aa31LG1G23090 Aethionema arabicum HOM05D003907 ORTHO05D004819 4.0e-242 841.3 494 86.6
Sabra06G0077000 Salix brachista HOM05D003907 ORTHO05D004819 5.2e-242 840.9 556 80.9
A05p39920 Brassica napus HOM05D003907 ORTHO05D004819 8.9e-242 840.1 494 86.8
Rhsim03G0144200 Rhododendron simsii HOM05D003907 ORTHO05D004819 2.0e-241 839.0 505 87.5
EL10Ac5g12561 Beta vulgaris HOM05D003907 ORTHO05D004819 5.8e-241 837.4 510 83.9
AUR62010458 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.4e-239 832.0 511 83.8
ECA247G1720 Erigeron canadensis HOM05D003907 ORTHO05D004819 3.5e-238 828.2 492 86.0
VMungo0331G1185 Vigna mungo HOM05D003907 ORTHO05D004819 6.6e-237 823.9 494 87.2
FAN05G4390 Fragaria x ananassa HOM05D003907 ORTHO05D004819 1.9e-236 822.4 494 85.8
Oeu064499.2 Olea europaea HOM05D003907 ORTHO05D004819 1.4e-234 816.2 547 79.3
CDE05G1648 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 2.6e-233 812.0 511 81.8
Zm00001eb269470 Zea mays HOM05D003907 ORTHO05D004819 1.6e-230 802.7 511 81.2
Lalb_Chr19g0124541 Lupinus albus HOM05D003907 ORTHO05D004819 3.5e-230 801.6 512 83.4
CDE05G1838 Ceratophyllum demersum HOM05D003907 ORTHO05D004819 3.9e-229 798.1 511 80.0
Ca_07641_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.9e-229 798.1 524 82.1
Ca_30080_v3 Cicer arietinum L. HOM05D003907 ORTHO05D004819 3.9e-229 798.1 524 82.1
Peaxi162Scf00141g01026 Petunia axillaris HOM05D003907 ORTHO05D004819 1.4e-226 789.6 510 81.2
AUR62030453 Chenopodium quinoa HOM05D003907 ORTHO05D004819 2.6e-225 785.4 512 80.7
Zm00001eb378570 Zea mays HOM05D003907 ORTHO05D004819 2.6e-225 785.4 511 80.0
Phvul.010G001200 Phaseolus vulgaris HOM05D003907 ORTHO05D004819 1.4e-223 779.6 510 80.4
BcaC05g29627 Brassica carinata HOM05D003907 ORTHO05D004819 9.0e-218 760.4 440 87.7
MELO3C003291.2 Cucumis melo HOM05D003907 ORTHO05D004819 4.6e-214 748.0 472 84.7
Duzib128G0387 Durio zibethinus HOM05D003907 ORTHO05D004819 5.1e-213 744.6 511 78.5
Duzib093G1828 Durio zibethinus HOM05D003907 ORTHO05D004819 2.0e-209 732.6 503 78.3
Lj3g0026649 Lotus japonicus HOM05D003907 ORTHO05D004819 1.1e-204 716.8 413 89.8
Actinidia20733 Actinidia chinensis HOM05D003907 ORTHO05D004819 2.9e-200 702.2 510 74.3
Mapoly0058s0053 Marchantia polymorpha HOM05D003907 ORTHO05D004819 2.0e-193 679.5 514 66.3
SMO367G0485 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.6e-190 669.8 503 70.0
Cpa.g.sc11.141 Carica papaya HOM05D003907 ORTHO05D004819 1.4e-186 656.8 375 89.6
unitig_22.g6592 Utricularia gibba HOM05D003907 ORTHO05D004819 4.7e-182 641.7 468 72.2
Pp3c13_15020 Physcomitrium patens HOM05D003907 ORTHO05D004819 2.6e-180 636.0 514 63.6
TPR.G7076 Trifolium pratense HOM05D003907 ORTHO05D004819 3.6e-174 615.5 364 87.9
Sc01g0006450 Simmondsia chinensis HOM05D003907 ORTHO05D004819 9.8e-172 607.4 365 86.8
CBR_g40208 Chara braunii HOM05D003907 ORTHO05D004819 4.8e-171 605.1 522 61.3
HPP92_003698 Vanilla planifolia HOM05D003907 ORTHO05D004819 1.8e-170 603.2 379 82.3
CBR_g53729 Chara braunii HOM05D003907 ORTHO05D004819 1.5e-167 593.6 510 60.8
DCAR_015417 Daucus carota HOM05D003907 ORTHO05D004819 7.2e-167 591.3 505 66.3
SMO146G0061 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 5.4e-162 575.1 496 60.1
Hma1.2p1_0362F.1_g136250 Hydrangea macrophylla HOM05D003907 ORTHO05D004819 1.7e-160 570.1 325 92.6
Pp3c23_4110 Physcomitrium patens HOM05D003907 ORTHO05D004819 1.8e-157 560.1 499 55.9
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 8.9e-157 557.8 347 84.7
Actinidia11586 Actinidia chinensis HOM05D003907 ORTHO05D004819 1.7e-152 543.5 457 68.5
Glyma.16G099300 Glycine max HOM05D003907 ORTHO05D004819 1.6e-150 537.0 307 92.5
Actinidia27153 Actinidia chinensis HOM05D003907 ORTHO05D004819 8.9e-141 504.6 284 93.3
AagrBONN_evm.TU.Sc2ySwM_368.1024 Anthoceros agrestis HOM05D003907 ORTHO05D004819 1.5e-132 477.2 383 63.4
Actinidia29101 Actinidia chinensis HOM05D003907 ORTHO05D004819 6.9e-125 451.8 254 89.0
PRCOL_00002088 Prasinoderma coloniale HOM05D003907 ORTHO05D004819 6.2e-118 428.7 508 47.6
Actinidia29102 Actinidia chinensis HOM05D003907 ORTHO05D004819 3.5e-113 412.9 245 89.0
MCO03G500 Micromonas commoda HOM05D003907 ORTHO05D004819 1.2e-105 387.9 486 44.4
SMO015G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.6e-105 387.5 386 54.7
SEGI_00285 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 7.9e-105 385.2 279 74.2
Cre01.g023400 Chlamydomonas reinhardtii HOM05D003907 ORTHO05D004819 8.2e-94 348.6 519 37.6
CSS0040994 Camellia sinensis var. sinensis HOM05D003907 ORTHO05D004819 9.1e-85 318.5 199 85.4
TPR.G8133 Trifolium pratense HOM05D003907 ORTHO05D038338 2.8e-70 270.4 503 39.4
SMO173G0027 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.7e-70 270.0 345 47.0
SEGI_07345 Sequoiadendron giganteum HOM05D003907 ORTHO05D004819 1.9e-58 231.1 144 84.0
SMO173G0021 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 1.8e-56 224.6 289 45.3
SMO023G0001 Selaginella moellendorffii HOM05D003907 ORTHO05D376622 3.0e-56 223.8 367 41.4
ATR0759G042 Amborella trichopoda HOM05D003907 ORTHO05D038338 4.7e-49 199.9 117 82.9
SMO146G0194 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.4e-45 187.6 206 53.4
ATR0759G047 Amborella trichopoda HOM05D003907 ORTHO05D004819 1.2e-44 185.3 143 73.4
SMO173G0002 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 2.5e-42 177.6 197 52.8
Ca_20230_v3 Cicer arietinum L. HOM05D003907 ORTHO05D148210 6.8e-32 142.9 448 31.0
SMO146G0334 Selaginella moellendorffii HOM05D003907 ORTHO05D004819 3.7e-30 137.1 119 58.0
BcaC01g04205 Brassica carinata HOM05D003907 ORTHO05D004819 9.2e-29 132.5 82 85.4
VMungo1080G1595 Vigna mungo HOM05D003907 ORTHO05D004819 1.3e-22 112.1 156 48.7
SMO173G0093 Selaginella moellendorffii HOM05D003907 ORTHO05D378519 3.9e-11 73.9 63 60.3
arahy.Tifrunner.gnm1.ann1.7H636Z Arachis hypogaea HOM05D005380 ORTHO05D006601 1.8e-08 65.1 37 81.1
arahy.Tifrunner.gnm1.ann1.W1QHU6 Arachis hypogaea HOM05D003907 ORTHO05D018508 6.9e-08 63.2 85 50.6
PSO541G6111 Papaver somniferum HOM05D003907 ORTHO05D305003 3.8e-06 57.4 38 73.7


User provided reference genes

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