Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TWI74G1102 Tripterygium wilfordii HOM05D008196 ORTHO05D010261 5.5e-184 647.5 327 100.0
Cfa016460 Carpinus fangiana HOM05D008196 ORTHO05D010261 4.6e-74 282.3 326 49.1
Atru.chr8.1725_Atru.chr8.1735 Acer truncatum HOM05D008196 ORTHO05D010261 1.0e-73 281.2 320 51.2
Dinv35820 Davidia involucrata HOM05D008196 ORTHO05D010261 1.3e-71 274.2 323 49.8
GSVIVG01033695001 Vitis vinifera HOM05D008196 ORTHO05D010261 2.1e-71 273.5 329 49.2
Haze_19461 Corylus avellana HOM05D008196 ORTHO05D010261 3.1e-70 269.6 351 45.9
CSS0018510 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.5e-69 267.3 324 45.7
CiPaw.10G001900 Carya illinoinensis HOM05D008196 ORTHO05D010261 2.7e-66 256.5 320 46.9
Hma1.2p1_0547F.1_g176400 Hydrangea macrophylla HOM05D008196 ORTHO05D010261 5.7e-64 248.8 323 46.4
TAR636G2455 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.5e-61 240.7 335 46.6
Duzib106G1531 Durio zibethinus HOM05D008196 ORTHO05D010261 1.9e-59 233.8 286 47.9
Glyma.19G186800 Glycine max HOM05D008196 ORTHO05D010261 3.2e-59 233.0 326 44.5
Psat3g040360 Pisum sativum HOM05D008196 ORTHO05D010261 5.5e-59 232.3 327 44.0
Glyma.03G186700 Glycine max HOM05D008196 ORTHO05D010261 9.3e-59 231.5 326 43.3
Ca_08867_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 2.7e-58 229.9 321 44.5
Medtr7g102410 Medicago truncatula HOM05D008196 ORTHO05D010261 1.8e-57 227.3 321 45.2
Ca_08927_v3 Cicer arietinum L. HOM05D008196 ORTHO05D010261 6.7e-57 225.3 321 43.6
Lj1g0021041 Lotus japonicus HOM05D008196 ORTHO05D010261 1.5e-56 224.2 330 43.3
Gohir.D04G108000 Gossypium hirsutum HOM05D008196 ORTHO05D010261 1.9e-56 223.8 324 42.0
Phvul.001G181700 Phaseolus vulgaris HOM05D008196 ORTHO05D010261 4.3e-56 222.6 318 44.0
Gohir.A04G069600 Gossypium hirsutum HOM05D008196 ORTHO05D010261 9.7e-56 221.5 325 41.5
Lalb_Chr21g0315171 Lupinus albus HOM05D008196 ORTHO05D010261 8.2e-55 218.4 328 43.9
Gorai.009G412100 Gossypium raimondii HOM05D008196 ORTHO05D010261 1.4e-54 217.6 324 41.0
VMungo1383G2144 Vigna mungo HOM05D008196 ORTHO05D010261 5.3e-54 215.7 323 42.4
Nn6g35204 Nelumbo nucifera HOM05D008196 ORTHO05D010261 3.8e-52 209.5 352 39.8
TPR.G8704 Trifolium pratense HOM05D008196 ORTHO05D010261 1.2e-50 204.5 323 41.5
Aqoxy1G01072 Aquilegia oxysepala HOM05D008196 ORTHO05D010261 1.4e-49 201.1 338 39.6
Dinv37347 Davidia involucrata HOM05D008196 ORTHO05D010261 4.3e-48 196.1 293 42.3
arahy.Tifrunner.gnm1.ann1.A0NJYH Arachis hypogaea HOM05D008196 ORTHO05D010261 5.3e-46 189.1 334 38.6
TAR633G2803 Trochodendron aralioides HOM05D008196 ORTHO05D010261 1.5e-45 187.6 340 40.3
Thecc.05G073000 Theobroma cacao HOM05D008196 ORTHO05D010261 4.5e-45 186.0 285 42.5
arahy.Tifrunner.gnm1.ann1.PXX6WP Arachis hypogaea HOM05D008196 ORTHO05D010261 6.5e-44 182.2 348 36.8
COL.COLO4_26896 Corchorus olitorius HOM05D008196 ORTHO05D011585 6.1e-42 175.6 282 41.1
Actinidia31311 Actinidia chinensis HOM05D008196 ORTHO05D010261 7.9e-42 175.3 326 37.4
QL07p041760 Quercus lobata HOM05D008196 ORTHO05D010261 3.5e-37 159.8 159 56.0
PSO063G4707 Papaver somniferum HOM05D008196 ORTHO05D010261 9.4e-35 151.8 360 34.4
CDE03G0205 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 1.2e-34 151.4 187 44.9
HanXRQChr13g0400671 Helianthus annuus HOM05D008196 ORTHO05D010261 1.6e-34 151.0 324 36.7
RhsimUnG0004600 Rhododendron simsii HOM05D008196 ORTHO05D010261 2.1e-34 150.6 333 35.1
RhsimUnG0068000 Rhododendron simsii HOM05D008196 ORTHO05D010261 2.1e-34 150.6 332 34.9
CDE06G1684 Ceratophyllum demersum HOM05D008196 ORTHO05D010261 2.7e-34 150.2 187 44.9
Nn3g19096 Nelumbo nucifera HOM05D008196 ORTHO05D010261 3.8e-28 129.8 342 33.9
PSO339G1434 Papaver somniferum HOM05D008196 ORTHO05D010261 6.5e-28 129.0 303 34.0
vmacro08799 Vaccinium macrocarpon HOM05D008196 ORTHO05D010261 4.2e-27 126.3 331 33.5
Manes.09G049502 Manihot esculenta HOM05D008196 ORTHO05D010261 1.7e-23 114.4 104 53.8
QL07p041763 Quercus lobata HOM05D008196 ORTHO05D010261 1.8e-22 110.9 177 40.7
Pp3c2_36970 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.5e-19 100.5 196 32.7
Pp3c2_36980 Physcomitrium patens HOM05D008196 ORTHO05D010261 2.5e-19 100.5 196 32.7
CANSAT80G2595 Cannabis sativa HOM05D008196 ORTHO05D010261 3.2e-19 100.1 327 30.6
HPP92_014786 Vanilla planifolia HOM05D008196 ORTHO05D010261 1.6e-18 97.8 293 34.5
SMO367G1035 Selaginella moellendorffii HOM05D008196 ORTHO05D010261 1.0e-17 95.1 175 36.0
Pp3c1_4500 Physcomitrium patens HOM05D008196 ORTHO05D010261 3.0e-17 93.6 185 35.1
PGR142G2786 Punica granatum HOM05D008196 ORTHO05D010261 5.2e-17 92.8 329 31.3
ClCG10G019830 Citrullus lanatus HOM05D022817 ORTHO05D010261 2.0e-16 90.9 331 31.7
AagrBONN_evm.TU.Sc2ySwM_344.3461 Anthoceros agrestis HOM05D008196 ORTHO05D010261 1.3e-15 88.2 227 30.8
Hund16860 Selenicereus undatus HOM05D008012 ORTHO05D010154 1.2e-13 81.6 181 30.9
Mapoly0028s0074 Marchantia polymorpha HOM05D008196 ORTHO05D010261 3.5e-13 80.1 205 29.3
Sed0000391 Sechium edule HOM05D022817 ORTHO05D010261 2.3e-12 77.4 338 31.1
CDE04G1170 Ceratophyllum demersum HOM05D008012 ORTHO05D010154 2.9e-12 77.0 191 28.3
CSS0006202 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 5.0e-12 76.3 59 61.0
ECA233G4339 Erigeron canadensis HOM05D005316 ORTHO05D006495 1.5e-11 74.7 67 58.2
Ciclev10002397m.g Citrus clementina HOM05D008012 ORTHO05D010154 3.3e-11 73.6 196 31.6
EL10Ac1g01062 Beta vulgaris HOM05D008012 ORTHO05D010154 4.2e-11 73.2 177 31.1
AUR62019041 Chenopodium quinoa HOM05D008012 ORTHO05D010154 9.5e-11 72.0 178 29.2
Manes.18G059880 Manihot esculenta HOM05D008012 ORTHO05D010154 1.6e-10 71.2 187 32.1
ATR0665G245 Amborella trichopoda HOM05D008012 ORTHO05D010154 3.6e-10 70.1 178 29.8
Eucgr.K02433 Eucalyptus grandis HOM05D008196 ORTHO05D010261 3.6e-10 70.1 83 50.6
Sed0013835 Sechium edule HOM05D022817 ORTHO05D010261 3.6e-10 70.1 332 28.3
CsaV3_3G036270 Cucumis sativus L. HOM05D022817 ORTHO05D010261 6.1e-10 69.3 83 51.8
MELO3C009385.2 Cucumis melo HOM05D022817 ORTHO05D010261 8.9e-09 65.5 326 27.3
Cfa021114 Carpinus fangiana HOM05D008196 ORTHO05D010261 1.2e-08 65.1 119 40.3
Aqoxy5G01307 Aquilegia oxysepala HOM05D008012 ORTHO05D010154 1.5e-08 64.7 202 26.7
ECA232G0711 Erigeron canadensis HOM05D008012 ORTHO05D010154 2.0e-08 64.3 204 29.4
Lalb_Chr23g0270051 Lupinus albus HOM05D008012 ORTHO05D010154 2.6e-08 63.9 175 26.9
FAN04G0544 Fragaria x ananassa HOM05D008012 ORTHO05D010154 3.4e-08 63.5 175 27.4
Lsat_1_v5_gn_9_75360 Lactuca sativa HOM05D008012 ORTHO05D010154 3.4e-08 63.5 191 26.7
CSS0003728 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 4.4e-08 63.2 50 52.0
FAN18G1410 Fragaria x ananassa HOM05D008012 ORTHO05D010154 4.4e-08 63.2 173 27.7
MBI02_g32605_MAGBIO Magnolia biondii HOM05D008012 ORTHO05D010154 4.4e-08 63.2 229 26.2
SEGI_22377 Sequoiadendron giganteum HOM05D008196 ORTHO05D010261 4.4e-08 63.2 336 27.4
FvH4_5g35450 Fragaria vesca HOM05D008012 ORTHO05D010154 7.5e-08 62.4 174 27.6
FAN08G2109 Fragaria x ananassa HOM05D008012 ORTHO05D010154 7.5e-08 62.4 174 27.6
RcHm_v2.0_Chr7g0236831 Rosa chinensis HOM05D008012 ORTHO05D010154 9.8e-08 62.0 192 27.6
Psat5g046360 Pisum sativum HOM05D008012 ORTHO05D010154 2.2e-07 60.8 170 26.5
Cpa.g.sc21.9 Carica papaya HOM05D008012 ORTHO05D010154 2.9e-07 60.5 203 26.6
CANSAT25G2577 Cannabis sativa HOM05D008012 ORTHO05D010154 6.4e-07 59.3 209 24.9
Glyma.04G091500 Glycine max HOM05D008012 ORTHO05D010154 8.3e-07 58.9 200 24.5
CSS0016699 Camellia sinensis var. sinensis HOM05D008196 ORTHO05D010261 1.4e-06 58.2 114 36.0
Atru.chr13.1021 Acer truncatum HOM05D008012 ORTHO05D010154 2.4e-06 57.4 231 25.1
QL09p017632 Quercus lobata HOM05D008012 ORTHO05D010154 7.0e-06 55.8 177 24.9


User provided reference genes

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